RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C HRQ1Q05549 1077 aa3.84□□□□□ -1.79
SGN1YIR001C BNA5Q05979 453 aa3.84□□□□□ -1.79
SGN1YIR001C AAD4Q07747 329 aa3.84□□□□□ -1.79
SGN1YIR001C AFT2Q08957 416 aa3.84□□□□□ -1.79
SGN1YIR001C EMP46Q12396 444 aa3.84□□□□□ -1.79
SGN1YIR001C DFG16Q99234 619 aa3.84□□□□□ -1.79
SGN1YIR001C SEC63P14906 663 aa3.83□□□□□ -1.8
SGN1YIR001C STE4P18851 423 aa3.83□□□□□ -1.8
SGN1YIR001C PRP9P19736 530 aaKnown RBP3.83□□□□□ -1.8
SGN1YIR001C PRO1P32264 428 aa3.83□□□□□ -1.8
SGN1YIR001C SRB2P34162 210 aa3.83□□□□□ -1.8
SGN1YIR001C HSL7P38274 827 aa3.83□□□□□ -1.8
SGN1YIR001C LAM1P38851 1228 aa3.83□□□□□ -1.8
SGN1YIR001C RPS26AP39938 119 aaKnown RBP3.83□□□□□ -1.8
SGN1YIR001C RPS26BP39939 119 aaKnown RBP3.83□□□□□ -1.8
SGN1YIR001C YER130CP39959 443 aa3.83□□□□□ -1.8
SGN1YIR001C YNR063WP53749 607 aa3.83□□□□□ -1.8
SGN1YIR001C SNO2P53823 222 aa3.83□□□□□ -1.8
SGN1YIR001C CSL4P53859 292 aaPredicted RBP3.83□□□□□ -1.8
SGN1YIR001C KTR6P54070 446 aa3.83□□□□□ -1.8
SGN1YIR001C EBS1Q03466 884 aaKnown RBP3.83□□□□□ -1.8
SGN1YIR001C SSY1Q03770 852 aa3.83□□□□□ -1.8
SGN1YIR001C YAP7Q08182 245 aa3.83□□□□□ -1.8
SGN1YIR001C NBA1Q08229 501 aaKnown RBP3.83□□□□□ -1.8
SGN1YIR001C APL5Q08951 932 aaKnown RBP3.83□□□□□ -1.8
SGN1YIR001C DDP1Q99321 188 aaKnown RBP3.83□□□□□ -1.8
SGN1YIR001C HIS1P00498 297 aaKnown RBP3.82□□□□□ -1.8
SGN1YIR001C HEM13P11353 328 aaKnown RBP3.82□□□□□ -1.8
SGN1YIR001C SST2P11972 698 aaKnown RBP3.82□□□□□ -1.8
SGN1YIR001C SAM35P14693 329 aa3.82□□□□□ -1.8
SGN1YIR001C ATE1P16639 503 aa3.82□□□□□ -1.8
SGN1YIR001C MIH1P23748 554 aa3.82□□□□□ -1.8
SGN1YIR001C MRC1P25588 1096 aa3.82□□□□□ -1.8
SGN1YIR001C GEX1P25596 615 aa3.82□□□□□ -1.8
SGN1YIR001C NIP100P33420 868 aa3.82□□□□□ -1.8
SGN1YIR001C PXL1P36166 706 aa3.82□□□□□ -1.8
SGN1YIR001C GEX2P36173 615 aa3.82□□□□□ -1.8
SGN1YIR001C EFM2P38347 419 aa3.82□□□□□ -1.8
SGN1YIR001C SRP68P38687 599 aaKnown RBP3.82□□□□□ -1.8
SGN1YIR001C NPR3P38742 1146 aa3.82□□□□□ -1.8
SGN1YIR001C PRM9P39551 298 aa3.82□□□□□ -1.8
SGN1YIR001C CCT5P40413 562 aaKnown RBP3.82□□□□□ -1.8
SGN1YIR001C AIP1P46680 615 aaKnown RBP3.82□□□□□ -1.8
SGN1YIR001C YPT11P48559 417 aa3.82□□□□□ -1.8
SGN1YIR001C AIM14P53109 570 aa3.82□□□□□ -1.8
SGN1YIR001C YTP1P53584 459 aa3.82□□□□□ -1.8
SGN1YIR001C PRM1P53835 661 aa3.82□□□□□ -1.8
SGN1YIR001C INA17Q02888 182 aa3.82□□□□□ -1.8
SGN1YIR001C YPL113CQ02961 396 aa3.82□□□□□ -1.8
SGN1YIR001C HDA2Q06629 674 aa3.82□□□□□ -1.8
SGN1YIR001C YDL073WQ07454 984 aa3.82□□□□□ -1.8
SGN1YIR001C THI73Q07904 523 aa3.82□□□□□ -1.8
SGN1YIR001C RTT10Q08924 1013 aa3.82□□□□□ -1.8
SGN1YIR001C YLR046CQ12253 270 aa3.82□□□□□ -1.8
SGN1YIR001C SUL2Q12325 893 aa3.82□□□□□ -1.8
SGN1YIR001C RKM5Q12367 367 aa3.82□□□□□ -1.8
SGN1YIR001C SFI1Q12369 946 aa3.82□□□□□ -1.8
SGN1YIR001C PEX11Q12462 236 aa3.82□□□□□ -1.8
SGN1YIR001C NAG1Q8TGN9 163 aa3.82□□□□□ -1.8
SGN1YIR001C SUC2P00724 532 aa3.81□□□□□ -1.8
SGN1YIR001C GAL4P04386 881 aa3.81□□□□□ -1.8
SGN1YIR001C RPS3P05750 240 aaKnown RBP3.81□□□□□ -1.8
SGN1YIR001C GPA1P08539 472 aa3.81□□□□□ -1.8
SGN1YIR001C MET16P18408 261 aaPredicted RBP3.81□□□□□ -1.8
SGN1YIR001C ADY2P25613 283 aa3.81□□□□□ -1.8
SGN1YIR001C ABD1P32783 436 aaPredicted RBP3.81□□□□□ -1.8
SGN1YIR001C YSC84P32793 468 aa3.81□□□□□ -1.8
SGN1YIR001C MRP4P32902 394 aa3.81□□□□□ -1.8
SGN1YIR001C RPC25P35718 212 aa3.81□□□□□ -1.8
SGN1YIR001C YKL151CP36059 337 aa3.81□□□□□ -1.8
SGN1YIR001C ADE17P38009 592 aaKnown RBP3.81□□□□□ -1.8
SGN1YIR001C CCZ1P38273 704 aa3.81□□□□□ -1.8
SGN1YIR001C PTC7P38797 343 aa3.81□□□□□ -1.8
SGN1YIR001C EDC3P39998 551 aaKnown RBP3.81□□□□□ -1.8
SGN1YIR001C AMA1P50082 593 aa3.81□□□□□ -1.8
SGN1YIR001C EMC4P53073 190 aa3.81□□□□□ -1.8
SGN1YIR001C PEX31P53203 462 aa3.81□□□□□ -1.8
SGN1YIR001C YGR283CP53336 341 aaPredicted RBP3.81□□□□□ -1.8
SGN1YIR001C ESBP6P53918 673 aa3.81□□□□□ -1.8
SGN1YIR001C PIR1Q03178 341 aa3.81□□□□□ -1.8
SGN1YIR001C YMR178WQ03219 274 aaKnown RBP3.81□□□□□ -1.8
SGN1YIR001C SND1Q04007 877 aa3.81□□□□□ -1.8
SGN1YIR001C ARA2Q04212 335 aa3.81□□□□□ -1.8
SGN1YIR001C RPC11Q04307 110 aaPredicted RBP3.81□□□□□ -1.8
SGN1YIR001C YML096WQ04489 525 aa3.81□□□□□ -1.8
SGN1YIR001C GFD1Q04839 188 aaKnown RBP3.81□□□□□ -1.8
SGN1YIR001C ATG10Q07879 167 aa3.81□□□□□ -1.8
SGN1YIR001C AIM39Q08223 395 aa3.81□□□□□ -1.8
SGN1YIR001C ETT1Q08421 412 aaKnown RBP3.81□□□□□ -1.8
SGN1YIR001C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.81□□□□□ -1.8not detected
SGN1YIR001C YIL046W-AQ3E7Z4 54 aa3.81□□□□□ -1.8
SGN1YIR001C VPS5Q92331 675 aa3.81□□□□□ -1.8
SGN1YIR001C PRP8P33334 2413 aaKnown RBP3.81□□□□□ -1.8
SGN1YIR001C CSF1Q12150 2958 aa3.81□□□□□ -1.8
SGN1YIR001C MIS1P09440 975 aaKnown RBP3.8□□□□□ -1.8
SGN1YIR001C RED1P14291 827 aa3.8□□□□□ -1.8
SGN1YIR001C PUT4P15380 627 aa3.8□□□□□ -1.8
SGN1YIR001C SEC1P30619 724 aaKnown RBP3.8□□□□□ -1.8
SGN1YIR001C SPC110P32380 944 aa3.8□□□□□ -1.8
SGN1YIR001C BAP2P38084 609 aa3.8□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms