RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W RRG1Q12167 365 aaPredicted RBP5.38□□□□□ -1.55
UBP9YER098W NCB2Q92317 146 aa5.38□□□□□ -1.55
UBP9YER098W YRF1-2P40105 1681 aa5.38□□□□□ -1.55
UBP9YER098W URA3P03962 267 aa5.37□□□□□ -1.55
UBP9YER098W NAT1P12945 854 aaKnown RBP5.37□□□□□ -1.55
UBP9YER098W RPL5P26321 297 aaKnown RBP5.37□□□□□ -1.55
UBP9YER098W CBF2P32504 956 aa5.37□□□□□ -1.55
UBP9YER098W LAS1P36146 502 aaPredicted RBP5.37□□□□□ -1.55
UBP9YER098W HEK2P38199 381 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
UBP9YER098W RFT1P38206 574 aaPredicted RBP5.37□□□□□ -1.55
UBP9YER098W GID8P40208 455 aa5.37□□□□□ -1.55
UBP9YER098W FAF1P40546 346 aaPredicted RBP5.37□□□□□ -1.55
UBP9YER098W STB1P42845 420 aa5.37□□□□□ -1.55
UBP9YER098W IRC6P43615 237 aa5.37□□□□□ -1.55
UBP9YER098W YBP2P53169 641 aa5.37□□□□□ -1.55
UBP9YER098W ACS1Q01574 713 aa5.37□□□□□ -1.55
UBP9YER098W MUB1Q03162 620 aa5.37□□□□□ -1.55
UBP9YER098W SGO1Q08490 590 aa5.37□□□□□ -1.55
UBP9YER098W HOS1Q12214 470 aa5.37□□□□□ -1.55
UBP9YER098W PFK2P16862 959 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
UBP9YER098W REC107P21651 314 aa5.37□□□□□ -1.55
UBP9YER098W RME1P32338 300 aaKnown RBP5.37□□□□□ -1.55
UBP9YER098W MVD1P32377 396 aaKnown RBP5.37□□□□□ -1.55
UBP9YER098W YKL050CP35736 922 aa5.37□□□□□ -1.55
UBP9YER098W SRL3P36167 246 aa5.37□□□□□ -1.55
UBP9YER098W MRPL36P36531 177 aa5.37□□□□□ -1.55
UBP9YER098W KTR3P38130 404 aaPredicted RBP5.37□□□□□ -1.55
UBP9YER098W TIF4631P39935 952 aaKnown RBP5.37□□□□□ -1.55
UBP9YER098W YNL195CP40168 261 aa5.37□□□□□ -1.55
UBP9YER098W FYV8P46949 817 aaKnown RBP5.37□□□□□ -1.55
UBP9YER098W PEF1P53238 335 aa5.37□□□□□ -1.55
UBP9YER098W SQS1P53866 767 aaKnown RBP5.37□□□□□ -1.55
UBP9YER098W NSE5Q03718 556 aa5.37□□□□□ -1.55
UBP9YER098W MGR3Q04472 501 aa5.37□□□□□ -1.55
UBP9YER098W TRI1Q05024 226 aa5.37□□□□□ -1.55
UBP9YER098W VPS36Q06696 566 aa5.37□□□□□ -1.55
UBP9YER098W AAD4Q07747 329 aa5.37□□□□□ -1.55
UBP9YER098W HMI1Q12039 706 aa5.37□□□□□ -1.55
UBP9YER098W HIF1Q12373 385 aa5.37□□□□□ -1.55
UBP9YER098W TY1B-NL2Q99337 1749 aaKnown RBP5.37□□□□□ -1.55
UBP9YER098W MATALPHA2P0CY08 210 aa5.36□□□□□ -1.55
UBP9YER098W HMLALPHA2P0CY09 210 aa5.36□□□□□ -1.55
UBP9YER098W TAL1P15019 335 aaKnown RBP5.36□□□□□ -1.55
UBP9YER098W SPO16P17122 198 aa5.36□□□□□ -1.55
UBP9YER098W ADE2P21264 571 aaKnown RBP5.36□□□□□ -1.55
UBP9YER098W SRB4P32569 687 aa5.36□□□□□ -1.55
UBP9YER098W TEF4P36008 412 aaKnown RBP5.36□□□□□ -1.55
UBP9YER098W EFM2P38347 419 aa5.36□□□□□ -1.55
UBP9YER098W TPA1P40032 644 aaKnown RBP5.36□□□□□ -1.55
UBP9YER098W PXA1P41909 870 aa5.36□□□□□ -1.55
UBP9YER098W GPD2P41911 440 aaKnown RBP5.36□□□□□ -1.55
UBP9YER098W MCM6P53091 1017 aaKnown RBP5.36□□□□□ -1.55
UBP9YER098W SOV1Q04748 898 aa5.36□□□□□ -1.55
UBP9YER098W CWH43P25618 953 aa5.36□□□□□ -1.55
UBP9YER098W SSE1P32589 693 aaKnown RBP5.36□□□□□ -1.55
UBP9YER098W FRD1P32614 470 aaKnown RBP5.36□□□□□ -1.55
UBP9YER098W MTC7P32633 139 aa5.36□□□□□ -1.55
UBP9YER098W RMA1P36001 430 aaKnown RBP5.36□□□□□ -1.55
UBP9YER098W PIM1P36775 1133 aa5.36□□□□□ -1.55
UBP9YER098W MND2P40577 368 aa5.36□□□□□ -1.55
UBP9YER098W BRO1P48582 844 aa5.36□□□□□ -1.55
UBP9YER098W URH1Q04179 340 aa5.36□□□□□ -1.55
UBP9YER098W PIG1Q06216 648 aa5.36□□□□□ -1.55
UBP9YER098W RPC37P36121 282 aa5.35□□□□□ -1.55
UBP9YER098W SPP381P38282 291 aaPredicted RBP5.35□□□□□ -1.55
UBP9YER098W ZDS2P54786 942 aa5.35□□□□□ -1.55
UBP9YER098W SYF1Q04048 859 aaPredicted RBP5.35□□□□□ -1.55
UBP9YER098W YMR114CQ04471 368 aaKnown RBP5.35□□□□□ -1.55
UBP9YER098W RRP9Q06506 573 aaKnown RBP5.35□□□□□ -1.55
UBP9YER098W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
UBP9YER098W NOP12Q08208 459 aaKnown RBP5.35□□□□□ -1.55
UBP9YER098W APC1P53886 1748 aa5.35□□□□□ -1.55
UBP9YER098W PCK1P10963 549 aa5.35□□□□□ -1.55
UBP9YER098W RPN2P32565 945 aaKnown RBP5.35□□□□□ -1.55
UBP9YER098W MRE11P32829 692 aa5.35□□□□□ -1.55
UBP9YER098W PXA2P34230 853 aa5.35□□□□□ -1.55
UBP9YER098W CTM1P38818 585 aa5.35□□□□□ -1.55
UBP9YER098W PRM2P40534 656 aa5.35□□□□□ -1.55
UBP9YER098W MDR1P53258 950 aa5.35□□□□□ -1.55
UBP9YER098W YKR005CQ02203 525 aa5.35□□□□□ -1.55
UBP9YER098W USA1Q03714 838 aa5.35□□□□□ -1.55
UBP9YER098W MFB1Q04922 465 aa5.35□□□□□ -1.55
UBP9YER098W HPF1Q05164 967 aa5.35□□□□□ -1.55
UBP9YER098W PCD1Q12524 340 aa5.35□□□□□ -1.55
UBP9YER098W PWP1P21304 576 aaKnown RBP5.34□□□□□ -1.55
UBP9YER098W PEX5P35056 612 aa5.34□□□□□ -1.55
UBP9YER098W ATG19P35193 415 aa5.34□□□□□ -1.55
UBP9YER098W NUP133P36161 1157 aa5.34□□□□□ -1.55
UBP9YER098W RTS1P38903 757 aa5.34□□□□□ -1.55
UBP9YER098W SHC1P39000 512 aa5.34□□□□□ -1.55
UBP9YER098W KHA1P40309 873 aa5.34□□□□□ -1.55
UBP9YER098W YIR042CP40586 236 aa5.34□□□□□ -1.55
UBP9YER098W PSP1P50896 841 aaKnown RBP5.34□□□□□ -1.55
UBP9YER098W TEL2P53038 688 aa5.34□□□□□ -1.55
UBP9YER098W MLC1P53141 149 aa5.34□□□□□ -1.55
UBP9YER098W COX18P53239 316 aa5.34□□□□□ -1.55
UBP9YER098W ASI2P53895 289 aa5.34□□□□□ -1.55
UBP9YER098W ARG5,6Q01217 863 aa5.34□□□□□ -1.55
UBP9YER098W SSY1Q03770 852 aa5.34□□□□□ -1.55
UBP9YER098W VBA4Q04602 768 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms