RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	PXA1	P41909	870 aa		6.55	□□□□□ -1.36
VMA3	YEL027W	CTK3	P46963	296 aa	Predicted RBP	6.55	□□□□□ -1.36
VMA3	YEL027W	KTR5	P53966	522 aa	Predicted RBP	6.55	□□□□□ -1.36
VMA3	YEL027W	PIN2	Q12057	282 aa		6.55	□□□□□ -1.36
VMA3	YEL027W	PER33	Q12144	273 aa		6.55	□□□□□ -1.36
VMA3	YEL027W	YLR046C	Q12253	270 aa		6.55	□□□□□ -1.36
VMA3	YEL027W	ILV2	P07342	687 aa	Known RBP	6.54	□□□□□ -1.36
VMA3	YEL027W	SST2	P11972	698 aa	Known RBP	6.54	□□□□□ -1.36
VMA3	YEL027W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
VMA3	YEL027W	MRPL8	P22353	238 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	AAT2	P23542	418 aa	Known RBP	6.54	□□□□□ -1.36
VMA3	YEL027W	YCL068C	P25593	260 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	GEX1	P25596	615 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	DEP1	P31385	405 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	GEX2	P36173	615 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	SPC97	P38863	823 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	BAT1	P38891	393 aa	Known RBP	6.54	□□□□□ -1.36
VMA3	YEL027W	AMA1	P50082	593 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	STR3	P53101	465 aa	Known RBP	6.54	□□□□□ -1.36
VMA3	YEL027W	NPY1	P53164	384 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	GND2	P53319	492 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	TEP1	P53916	434 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	SLT2	Q00772	484 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	HEL2	Q05580	639 aa	Known RBP	6.54	□□□□□ -1.36
VMA3	YEL027W	SFH1	Q06168	426 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	CMS1	Q07897	291 aa	Known RBP	6.54	□□□□□ -1.36
VMA3	YEL027W	TRE2	Q08693	809 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	PEX11	Q12462	236 aa		6.54	□□□□□ -1.36
VMA3	YEL027W	TEF1	P02994	458 aa	Known RBP	6.53	□□□□□ -1.36
VMA3	YEL027W	SEC63	P14906	663 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	AMS1	P22855	1083 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	RML2	P32611	393 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	TFB1	P32776	642 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	LIP5	P32875	414 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	SRX1	P36077	127 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	YFL012W	P43580	148 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	BUD13	P46947	266 aa	Predicted RBP	6.53	□□□□□ -1.36
VMA3	YEL027W	AIM14	P53109	570 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	TIM13	P53299	105 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	IPI3	P53877	555 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	NOP15	P53927	220 aa	Predicted RBP	6.53	□□□□□ -1.36
VMA3	YEL027W	AQR1	P53943	586 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	RPL34A	P87262	121 aa	Predicted RBP	6.53	□□□□□ -1.36
VMA3	YEL027W	PIR1	Q03178	341 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	YDL129W	Q07555	291 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	VHS3	Q08438	674 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	YOR223W	Q12015	292 aa		6.53	□□□□□ -1.36
VMA3	YEL027W	SCH9	P11792	824 aa	Known RBP	6.52	□□□□□ -1.37
VMA3	YEL027W	CLN1	P20437	546 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	KIP2	P28743	706 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	SET3	P36124	751 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	TFA2	P36145	328 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	ETR1	P38071	380 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	YHR078W	P38799	552 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	REV7	P38927	245 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	SER33	P40510	469 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	COQ5	P49017	307 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	LSC1	P53598	329 aa	Known RBP	6.52	□□□□□ -1.37
VMA3	YEL027W	PRM1	P53835	661 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	EFM6	P53970	246 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	ORC3	P54790	616 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	REG1	Q00816	1014 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	OMS1	Q06668	471 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	YET3	Q07451	203 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	OPI10	Q08202	246 aa		6.52	□□□□□ -1.37
VMA3	YEL027W	RNA1	P11745	407 aa	Known RBP	6.51	□□□□□ -1.37
VMA3	YEL027W	INO1	P11986	533 aa		6.51	□□□□□ -1.37
VMA3	YEL027W	ATP12	P22135	325 aa		6.51	□□□□□ -1.37
VMA3	YEL027W	MNE1	P24720	663 aa		6.51	□□□□□ -1.37
VMA3	YEL027W	CLB1	P24868	471 aa		6.51	□□□□□ -1.37
VMA3	YEL027W	YSP3	P25036	478 aa		6.51	□□□□□ -1.37
VMA3	YEL027W	MRP21	P38175	177 aa		6.51	□□□□□ -1.37
VMA3	YEL027W	MED8	P38304	223 aa		6.51	□□□□□ -1.37
VMA3	YEL027W	RGI2	P40188	164 aa		6.51	□□□□□ -1.37
VMA3	YEL027W	SIP4	P46954	829 aa		6.51	□□□□□ -1.37
VMA3	YEL027W	CCT8	P47079	568 aa	Known RBP	6.51	□□□□□ -1.37
VMA3	YEL027W	NUP100	Q02629	959 aa		6.51	□□□□□ -1.37
VMA3	YEL027W	NHX1	Q04121	633 aa		6.51	□□□□□ -1.37
VMA3	YEL027W	GSF2	Q04697	403 aa	Known RBP	6.51	□□□□□ -1.37
VMA3	YEL027W	BUD20	Q08004	166 aa	Predicted RBP	6.51	□□□□□ -1.37
VMA3	YEL027W	SLD7	Q08457	257 aa		6.51	□□□□□ -1.37
VMA3	YEL027W	ACC1	Q00955	2233 aa	Known RBP	6.51	□□□□□ -1.37
VMA3	YEL027W	SSC1	P0CS90	654 aa	Known RBP	6.5	□□□□□ -1.37
VMA3	YEL027W	SRV2	P17555	526 aa	Known RBP	6.5	□□□□□ -1.37
VMA3	YEL027W	CHL1	P22516	861 aa	Predicted RBP	6.5	□□□□□ -1.37
VMA3	YEL027W	DCC1	P25559	380 aa		6.5	□□□□□ -1.37
VMA3	YEL027W	YCR051W	P25631	222 aa		6.5	□□□□□ -1.37
VMA3	YEL027W	HRR25	P29295	494 aa	Known RBP	6.5	□□□□□ -1.37
VMA3	YEL027W	RIM1	P32445	135 aa	Known RBP	6.5	□□□□□ -1.37
VMA3	YEL027W	DCW1	P36091	449 aa		6.5	□□□□□ -1.37
VMA3	YEL027W	WSC4	P38739	605 aa		6.5	□□□□□ -1.37
VMA3	YEL027W	FAA3	P39002	694 aa		6.5	□□□□□ -1.37
VMA3	YEL027W	SEO1	P39709	593 aa		6.5	□□□□□ -1.37
VMA3	YEL027W	ECM1	P39715	212 aa		6.5	□□□□□ -1.37
VMA3	YEL027W	SSP120	P39931	234 aa	Known RBP	6.5	□□□□□ -1.37
VMA3	YEL027W	SLX8	P40072	274 aa		6.5	□□□□□ -1.37
VMA3	YEL027W	DSN1	P40568	576 aa		6.5	□□□□□ -1.37
VMA3	YEL027W	REF2	P42073	533 aa	Predicted RBP	6.5	□□□□□ -1.37
VMA3	YEL027W	TRS31	Q03337	283 aa		6.5	□□□□□ -1.37
VMA3	YEL027W	BUD22	Q04347	519 aa	Known RBP	6.5	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms