RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	HXT4	P32467	576 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	TOD6	P34219	525 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	YBR056W	P38081	501 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	DUG2	P38149	878 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	MRX3	P38172	270 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	YBR259W	P38338	688 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	RPP1	P38786	293 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	PMC1	P38929	1173 aa	Predicted RBP	4.58	□□□□□ -1.68
UBC8	YEL012W	BUL1	P48524	976 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	ORC5	P50874	479 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	SLD3	P53135	668 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	SPC105	P53148	917 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	CWC21	Q03375	135 aa	Known RBP	4.58	□□□□□ -1.68
UBC8	YEL012W	NSE5	Q03718	556 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	MCM21	Q06675	368 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	STP4	Q07351	490 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	NSE1	Q07913	336 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	PEX15	Q08215	383 aa		4.58	□□□□□ -1.68
UBC8	YEL012W	ATP1	P07251	545 aa	Known RBP	4.57	□□□□□ -1.68
UBC8	YEL012W	YEL076C-A	P0CX16	216 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	YLR464W	P0CX17	216 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	RNQ1	P25367	405 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	COT1	P32798	439 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	SIP3	P38717	1229 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	YEL076C	P39971	216 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	EMP65	P40085	556 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	YNL195C	P40168	261 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	SPO22	P40511	975 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	DAS1	P47005	663 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	RNR4	P49723	345 aa	Known RBP	4.57	□□□□□ -1.68
UBC8	YEL012W	NRG1	Q03125	231 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	TMN2	Q04562	672 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	CDD1	Q06549	142 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	ENB1	Q08299	606 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	SMC6	Q12749	1114 aa		4.57	□□□□□ -1.68
UBC8	YEL012W	GAL1	P04385	528 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	STE11	P23561	717 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	NGG1	P32494	702 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	SKG6	P32900	734 aa	Predicted RBP	4.56	□□□□□ -1.68
UBC8	YEL012W	NIC96	P34077	839 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	UBP5	P39944	805 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	BFA1	P47113	574 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	TOF1	P53840	1238 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	CBK1	P53894	756 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	STP1	Q00947	519 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	ADA2	Q02336	434 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	YMR210W	Q03649	449 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	FUS2	Q05670	677 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	ECM7	Q06200	448 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	VPS36	Q06696	566 aa		4.56	□□□□□ -1.68
UBC8	YEL012W	GET3	Q12154	354 aa	Known RBP	4.56	□□□□□ -1.68
UBC8	YEL012W	PDH1	Q12428	516 aa	Known RBP	4.56	□□□□□ -1.68
UBC8	YEL012W	HRP1	Q99383	534 aa	Known RBP	4.56	□□□□□ -1.68
UBC8	YEL012W	POL2	P21951	2222 aa	Known RBP	4.56	□□□□□ -1.68
UBC8	YEL012W	HSP82	P02829	709 aa	Known RBP	4.55	□□□□□ -1.68
UBC8	YEL012W	HOM2	P13663	365 aa	Known RBP	4.55	□□□□□ -1.68
UBC8	YEL012W	PFK1	P16861	987 aa	Known RBP	4.55	□□□□□ -1.68
UBC8	YEL012W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
UBC8	YEL012W	MF(ALPHA)2	P32435	120 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	ELM1	P32801	640 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	LYS9	P38999	446 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	GET2	P40056	285 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	FKH2	P41813	862 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	IRC5	P43610	853 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	REC102	Q02721	264 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	VTC3	Q02725	835 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	HER2	Q03557	464 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	EIS1	Q05050	843 aa	Known RBP	4.55	□□□□□ -1.68
UBC8	YEL012W	RGC1	Q06108	1083 aa	Known RBP	4.55	□□□□□ -1.68
UBC8	YEL012W	YDL057W	Q07379	328 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	NGL1	Q08213	363 aa	Known RBP	4.55	□□□□□ -1.68
UBC8	YEL012W	VHS3	Q08438	674 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	LEA1	Q08963	238 aa	Predicted RBP	4.55	□□□□□ -1.68
UBC8	YEL012W	HRT3	Q12347	344 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	TRM13	Q12383	476 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	CEX1	Q12453	761 aa		4.55	□□□□□ -1.68
UBC8	YEL012W	GAL80	P04387	435 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	FRS1	P15624	595 aa	Known RBP	4.54	□□□□□ -1.68
UBC8	YEL012W	FRS2	P15625	503 aa	Known RBP	4.54	□□□□□ -1.68
UBC8	YEL012W	RNR1	P21524	888 aa	Known RBP	4.54	□□□□□ -1.68
UBC8	YEL012W	DCG1	P32460	244 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	VPH1	P32563	840 aa	Known RBP	4.54	□□□□□ -1.68
UBC8	YEL012W	PET127	P32606	800 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	TRZ1	P36159	838 aa	Predicted RBP	4.54	□□□□□ -1.68
UBC8	YEL012W	MMS4	P38257	691 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	OPY1	P38271	328 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	SFB3	P38810	929 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	BUD8	P41698	603 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	VTC2	P43585	828 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	POL31	P46957	487 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	NOP9	P47077	666 aa	Known RBP	4.54	□□□□□ -1.68
UBC8	YEL012W	CEG1	Q01159	459 aa	Predicted RBP	4.54	□□□□□ -1.68
UBC8	YEL012W	OMS1	Q06668	471 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	YPQ1	Q12010	308 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	TIP41	Q12199	356 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	CTF3	Q12748	733 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	GCN1	P33892	2672 aa	Known RBP	4.54	□□□□□ -1.68
UBC8	YEL012W	IRA1	P18963	3092 aa		4.54	□□□□□ -1.68
UBC8	YEL012W	TRP4	P07285	380 aa	Predicted RBP	4.53	□□□□□ -1.68
UBC8	YEL012W	RPC53	P25441	422 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms