RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	PSP1	P50896	841 aa	Known RBP	4.67	□□□□□ -1.66
TFB3	YDR460W	MRM2	P53123	320 aa		4.67	□□□□□ -1.66
TFB3	YDR460W	YVH1	Q02256	364 aa	Known RBP	4.67	□□□□□ -1.66
TFB3	YDR460W	MUB1	Q03162	620 aa		4.67	□□□□□ -1.66
TFB3	YDR460W	SRT1	Q03175	343 aa		4.67	□□□□□ -1.66
TFB3	YDR460W	ABZ2	Q03266	374 aa		4.67	□□□□□ -1.66
TFB3	YDR460W	NSE3	Q05541	303 aa		4.67	□□□□□ -1.66
TFB3	YDR460W	RIM20	Q12033	661 aa		4.67	□□□□□ -1.66
TFB3	YDR460W	MDM20	Q12387	796 aa	Known RBP	4.67	□□□□□ -1.66
TFB3	YDR460W	ZRT2	Q12436	422 aa		4.67	□□□□□ -1.66
TFB3	YDR460W	ATG11	Q12527	1178 aa		4.67	□□□□□ -1.66
TFB3	YDR460W	YOR111W	Q99210	232 aa		4.67	□□□□□ -1.66
TFB3	YDR460W	CHO2	P05374	869 aa	Known RBP	4.66	□□□□□ -1.66
TFB3	YDR460W	YER152C	P10356	443 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	CBP3	P21560	335 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	DBF2	P22204	572 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	SWI4	P25302	1093 aa	Known RBP	4.66	□□□□□ -1.66
TFB3	YDR460W	SPS22	P25380	463 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	KRE2	P27809	442 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	ACP1	P32463	125 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	YBL010C	P32788	280 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	RPT5	P33297	434 aa	Known RBP	4.66	□□□□□ -1.66
TFB3	YDR460W	WHI3	P34761	661 aa	Known RBP	4.66	□□□□□ -1.66
TFB3	YDR460W	AST1	P35183	429 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	BCD1	P38772	366 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	CCT2	P39076	527 aa	Known RBP	4.66	□□□□□ -1.66
TFB3	YDR460W	ERP2	P39704	215 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	GPB2	P39717	880 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	YER186C	P40101	306 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	CIT3	P43635	486 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
TFB3	YDR460W	STB4	P50104	949 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	CUE3	P53137	624 aa	Known RBP	4.66	□□□□□ -1.66
TFB3	YDR460W	REX2	P54964	269 aa	Known RBP	4.66	□□□□□ -1.66
TFB3	YDR460W	ATP25	Q03153	612 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	EMI2	Q04409	500 aa	Known RBP	4.66	□□□□□ -1.66
TFB3	YDR460W	ENT2	Q05785	613 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	PDR8	Q06149	701 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	DXO1	Q06349	442 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	ATG29	Q12092	213 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	YDR061W	Q12298	539 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	RTR2	Q12378	196 aa		4.66	□□□□□ -1.66
TFB3	YDR460W	CAF20	P12962	161 aa	Known RBP	4.65	□□□□□ -1.67
TFB3	YDR460W	ATR1	P13090	542 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	CPR3	P25719	182 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	FUN30	P31380	1131 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	CYM1	P32898	989 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	VAM7	P32912	316 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	PXA2	P34230	853 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	YBR184W	P38299	523 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	GOS1	P38736	223 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	RPN3	P40016	523 aa	Known RBP	4.65	□□□□□ -1.67
TFB3	YDR460W	PCI8	P40512	444 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	MNT3	P40549	630 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	CCT8	P47079	568 aa	Known RBP	4.65	□□□□□ -1.67
TFB3	YDR460W	GPI8	P49018	411 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	IMA1	P53051	589 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	MLC1	P53141	149 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	YGR125W	P53273	1036 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	SNF12	P53628	566 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	SHR3	Q02774	210 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	VPS64	Q03944	604 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	DCS1	Q06151	350 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	DBP9	Q06218	594 aa	Known RBP	4.65	□□□□□ -1.67
TFB3	YDR460W	VTA1	Q06263	330 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	YAP7	Q08182	245 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	YOR059C	Q08448	450 aa	Known RBP	4.65	□□□□□ -1.67
TFB3	YDR460W	ALE1	Q08548	619 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	AIM41	Q12032	185 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	HUA2	Q12134	243 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	YLR122C	Q12312	125 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	YPT6	Q99260	215 aa		4.65	□□□□□ -1.67
TFB3	YDR460W	UTP10	P42945	1769 aa	Known RBP	4.64	□□□□□ -1.67
TFB3	YDR460W	CHS2	P14180	963 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	KGD2	P19262	463 aa	Predicted RBP	4.64	□□□□□ -1.67
TFB3	YDR460W	HSP60	P19882	572 aa	Known RBP	4.64	□□□□□ -1.67
TFB3	YDR460W	PWP2	P25635	923 aa	Known RBP	4.64	□□□□□ -1.67
TFB3	YDR460W	SSE2	P32590	693 aa	Known RBP	4.64	□□□□□ -1.67
TFB3	YDR460W	YSC84	P32793	468 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	APL2	P36000	726 aa	Predicted RBP	4.64	□□□□□ -1.67
TFB3	YDR460W	NTR2	P36118	322 aa	Predicted RBP	4.64	□□□□□ -1.67
TFB3	YDR460W	ECM21	P38167	1117 aa	Known RBP	4.64	□□□□□ -1.67
TFB3	YDR460W	APD1	P38281	316 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	MSS4	P38994	779 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	GEM1	P39722	662 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	SSO2	P39926	295 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	YER034W	P40022	185 aa	Known RBP	4.64	□□□□□ -1.67
TFB3	YDR460W	UTP25	P40498	721 aa	Known RBP	4.64	□□□□□ -1.67
TFB3	YDR460W	CIN5	P40917	295 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	ROK1	P45818	564 aa	Predicted RBP	4.64	□□□□□ -1.67
TFB3	YDR460W	TIM54	P47045	478 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	YJR008W	P47085	338 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	EMC2	P47133	292 aa	Known RBP	4.64	□□□□□ -1.67
TFB3	YDR460W	PAN2	P53010	1115 aa	Predicted RBP	4.64	□□□□□ -1.67
TFB3	YDR460W	TNA1	P53322	534 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	ORC4	P54791	529 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	RAD30	Q04049	632 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	COX20	Q04935	205 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	YLR407W	Q06070	228 aa		4.64	□□□□□ -1.67
TFB3	YDR460W	ARR2	Q06597	130 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms