RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C MSY1P48527 492 aa3.21□□□□□ -1.9
SNU56YDR240C TEP1P53916 434 aa3.21□□□□□ -1.9
SNU56YDR240C MTG1Q03151 367 aaPredicted RBP3.21□□□□□ -1.9
SNU56YDR240C YDR109CQ04585 715 aa3.21□□□□□ -1.9
SNU56YDR240C YMR034CQ05131 434 aaPredicted RBP3.21□□□□□ -1.9
SNU56YDR240C ECI1Q05871 280 aa3.21□□□□□ -1.9
SNU56YDR240C PET122P10355 254 aa3.2□□□□□ -1.9
SNU56YDR240C MRP2P10663 115 aaPredicted RBP3.2□□□□□ -1.9
SNU56YDR240C YKL133CP36066 463 aa3.2□□□□□ -1.9
SNU56YDR240C MET30P39014 640 aa3.2□□□□□ -1.9
SNU56YDR240C YIL169CP40442 995 aa3.2□□□□□ -1.9
SNU56YDR240C ASG1P40467 964 aa3.2□□□□□ -1.9
SNU56YDR240C BET4Q00618 327 aa3.2□□□□□ -1.9
SNU56YDR240C BRE1Q07457 700 aaKnown RBP3.2□□□□□ -1.9
SNU56YDR240C NDD1Q08887 554 aa3.2□□□□□ -1.9
SNU56YDR240C MIS1P09440 975 aaKnown RBP3.19□□□□□ -1.9
SNU56YDR240C POL3P15436 1097 aa3.19□□□□□ -1.9
SNU56YDR240C RIT1P23796 513 aa3.19□□□□□ -1.9
SNU56YDR240C APM3P38153 483 aa3.19□□□□□ -1.9
SNU56YDR240C FSH1P38777 243 aaKnown RBP3.19□□□□□ -1.9
SNU56YDR240C TAN1P53072 289 aaPredicted RBP3.19□□□□□ -1.9
SNU56YDR240C PEX8P53248 589 aa3.19□□□□□ -1.9
SNU56YDR240C CPR6P53691 371 aaKnown RBP3.19□□□□□ -1.9
SNU56YDR240C SND1Q04007 877 aa3.19□□□□□ -1.9
SNU56YDR240C MLC2Q06580 163 aa3.19□□□□□ -1.9
SNU56YDR240C SUL2Q12325 893 aa3.19□□□□□ -1.9
SNU56YDR240C PIF1P07271 859 aa3.18□□□□□ -1.9
SNU56YDR240C LRE1P25579 583 aaKnown RBP3.18□□□□□ -1.9
SNU56YDR240C GCD7P32502 381 aaPredicted RBP3.18□□□□□ -1.9
SNU56YDR240C POS5Q06892 414 aa3.18□□□□□ -1.9
SNU56YDR240C GPN2Q08726 347 aaPredicted RBP3.18□□□□□ -1.9
SNU56YDR240C MPD2Q99316 277 aa3.18□□□□□ -1.9
SNU56YDR240C ADE3P07245 946 aaKnown RBP3.17□□□□□ -1.9
SNU56YDR240C GPA1P08539 472 aa3.17□□□□□ -1.9
SNU56YDR240C SUI3P09064 285 aaKnown RBP3.17□□□□□ -1.9
SNU56YDR240C PCT1P13259 424 aa3.17□□□□□ -1.9
SNU56YDR240C MNN2P38069 597 aa3.17□□□□□ -1.9
SNU56YDR240C QRI7P43122 407 aa3.17□□□□□ -1.9
SNU56YDR240C TAM41P53230 385 aa3.17□□□□□ -1.9
SNU56YDR240C YLR455WQ06188 304 aa3.17□□□□□ -1.9
SNU56YDR240C RPL42AP0CX27 106 aaKnown RBP3.16□□□□□ -1.9
SNU56YDR240C RPL42BP0CX28 106 aaKnown RBP3.16□□□□□ -1.9
SNU56YDR240C YCR006CP25350 157 aa3.16□□□□□ -1.9
SNU56YDR240C ARP2P32381 391 aaKnown RBP3.16□□□□□ -1.9
SNU56YDR240C SAD1P43589 448 aa3.16□□□□□ -1.9
SNU56YDR240C YGL036WP53185 909 aaPredicted RBP3.16□□□□□ -1.9
SNU56YDR240C DCP2P53550 970 aaKnown RBP3.16□□□□□ -1.9
SNU56YDR240C ADE16P54113 591 aaKnown RBP3.16□□□□□ -1.9
SNU56YDR240C MET14Q02196 202 aa3.16□□□□□ -1.9
SNU56YDR240C ARP9Q05123 467 aa3.16□□□□□ -1.9
SNU56YDR240C YML003WP0CF16 290 aa3.16□□□□□ -1.9
SNU56YDR240C VRG4P40107 337 aa3.16□□□□□ -1.9
SNU56YDR240C YLR049CQ12110 428 aa3.16□□□□□ -1.9
SNU56YDR240C SPO16P17122 198 aa3.15□□□□□ -1.91
SNU56YDR240C SWI4P25302 1093 aaKnown RBP3.15□□□□□ -1.91
SNU56YDR240C VPS27P40343 622 aaKnown RBP3.15□□□□□ -1.91
SNU56YDR240C FAF1P40546 346 aaPredicted RBP3.15□□□□□ -1.91
SNU56YDR240C YNL181WP53878 407 aa3.15□□□□□ -1.91
SNU56YDR240C IZH1Q03419 316 aa3.15□□□□□ -1.91
SNU56YDR240C ECM16Q04217 1267 aaKnown RBP3.15□□□□□ -1.91
SNU56YDR240C FMP42Q04991 504 aa3.15□□□□□ -1.91
SNU56YDR240C NRT1Q08485 598 aa3.15□□□□□ -1.91
SNU56YDR240C FRE3Q08905 711 aa3.15□□□□□ -1.91
SNU56YDR240C YLR112WQ12130 139 aa3.15□□□□□ -1.91
SNU56YDR240C PHO2P07269 559 aa3.14□□□□□ -1.91
SNU56YDR240C MSS18P08593 268 aa3.14□□□□□ -1.91
SNU56YDR240C YSP3P25036 478 aa3.14□□□□□ -1.91
SNU56YDR240C MSH1P25846 959 aa3.14□□□□□ -1.91
SNU56YDR240C PPZ1P26570 692 aa3.14□□□□□ -1.91
SNU56YDR240C RFA2P26754 273 aaKnown RBP3.14□□□□□ -1.91
SNU56YDR240C PTP2P29461 750 aa3.14□□□□□ -1.91
SNU56YDR240C BZZ1P38822 633 aa3.14□□□□□ -1.91
SNU56YDR240C SPC72P39723 622 aa3.14□□□□□ -1.91
SNU56YDR240C YND1P40009 630 aa3.14□□□□□ -1.91
SNU56YDR240C IML2P47031 731 aa3.14□□□□□ -1.91
SNU56YDR240C ZAP1P47043 880 aa3.14□□□□□ -1.91
SNU56YDR240C VAM6Q07468 1049 aa3.14□□□□□ -1.91
SNU56YDR240C SWT1Q12104 458 aa3.14□□□□□ -1.91
SNU56YDR240C TAH18Q12181 623 aa3.14□□□□□ -1.91
SNU56YDR240C GAL1P04385 528 aa3.13□□□□□ -1.91
SNU56YDR240C ATP4P05626 244 aa3.13□□□□□ -1.91
SNU56YDR240C STE50P25344 346 aa3.13□□□□□ -1.91
SNU56YDR240C NUP120P35729 1037 aa3.13□□□□□ -1.91
SNU56YDR240C EFM2P38347 419 aa3.13□□□□□ -1.91
SNU56YDR240C YIL161WP40449 235 aaKnown RBP3.13□□□□□ -1.91
SNU56YDR240C HIS6P40545 261 aa3.13□□□□□ -1.91
SNU56YDR240C RPN11P43588 306 aaKnown RBP3.13□□□□□ -1.91
SNU56YDR240C YGL260WP53056 76 aa3.13□□□□□ -1.91
SNU56YDR240C PAP2P53632 584 aaKnown RBP3.13□□□□□ -1.91
SNU56YDR240C MOT3P54785 490 aaKnown RBP3.13□□□□□ -1.91
SNU56YDR240C DIG1Q03063 452 aaKnown RBP3.13□□□□□ -1.91
SNU56YDR240C TRS130Q03660 1102 aa3.13□□□□□ -1.91
SNU56YDR240C YMR254CQ04838 102 aa3.13□□□□□ -1.91
SNU56YDR240C YMR317WQ04893 1140 aa3.13□□□□□ -1.91
SNU56YDR240C UTP21Q06078 939 aaPredicted RBP3.13□□□□□ -1.91
SNU56YDR240C YTH1Q06102 208 aaPredicted RBP3.13□□□□□ -1.91
SNU56YDR240C SWA2Q06677 668 aa3.13□□□□□ -1.91
SNU56YDR240C GEX2P36173 615 aa3.12□□□□□ -1.91
SNU56YDR240C LEU5P38702 357 aa3.12□□□□□ -1.91
SNU56YDR240C MRX1P40050 688 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms