RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C TAH18Q12181 623 aa4.37□□□□□ -1.71
SHU2YDR078C COX1P00401 534 aa4.36□□□□□ -1.71
SHU2YDR078C DMC1P25453 334 aa4.36□□□□□ -1.71
SHU2YDR078C HES1P35843 434 aa4.36□□□□□ -1.71
SHU2YDR078C KTR3P38130 404 aaPredicted RBP4.36□□□□□ -1.71
SHU2YDR078C YBR225WP38321 900 aa4.36□□□□□ -1.71
SHU2YDR078C SLZ1P40167 298 aa4.36□□□□□ -1.71
SHU2YDR078C SGM1P47166 707 aa4.36□□□□□ -1.71
SHU2YDR078C COG2P53271 262 aa4.36□□□□□ -1.71
SHU2YDR078C SPC19Q03954 165 aa4.36□□□□□ -1.71
SHU2YDR078C MFB1Q04922 465 aa4.36□□□□□ -1.71
SHU2YDR078C YML053CQ04978 212 aa4.36□□□□□ -1.71
SHU2YDR078C RIX7Q07844 837 aaKnown RBP4.36□□□□□ -1.71
SHU2YDR078C YPL191CQ08930 360 aa4.36□□□□□ -1.71
SHU2YDR078C NOP58Q12499 511 aaKnown RBP4.36□□□□□ -1.71
SHU2YDR078C YBR126W-AQ8TGU7 68 aa4.36□□□□□ -1.71
SHU2YDR078C AI5_ALPHAQ9ZZX1 630 aa4.36□□□□□ -1.71
SHU2YDR078C FOB1O13329 566 aa4.35□□□□□ -1.71
SHU2YDR078C SEC53P07283 254 aaKnown RBP4.35□□□□□ -1.71
SHU2YDR078C SUI3P09064 285 aaKnown RBP4.35□□□□□ -1.71
SHU2YDR078C CDC43P18898 376 aa4.35□□□□□ -1.71
SHU2YDR078C KIN3P22209 435 aa4.35□□□□□ -1.71
SHU2YDR078C MRPL9P31334 269 aa4.35□□□□□ -1.71
SHU2YDR078C YBL029WP38201 376 aa4.35□□□□□ -1.71
SHU2YDR078C MUP3P38734 546 aa4.35□□□□□ -1.71
SHU2YDR078C FLC2P39719 783 aa4.35□□□□□ -1.71
SHU2YDR078C IME4P41833 600 aa4.35□□□□□ -1.71
SHU2YDR078C UBX6P47049 396 aa4.35□□□□□ -1.71
SHU2YDR078C MSY1P48527 492 aa4.35□□□□□ -1.71
SHU2YDR078C ASN1P49089 572 aaKnown RBP4.35□□□□□ -1.71
SHU2YDR078C ARE2P53629 642 aaKnown RBP4.35□□□□□ -1.71
SHU2YDR078C INN1P53901 409 aa4.35□□□□□ -1.71
SHU2YDR078C WAR1Q03631 944 aa4.35□□□□□ -1.71
SHU2YDR078C RAD33Q04231 177 aa4.35□□□□□ -1.71
SHU2YDR078C YOR019WQ99248 730 aa4.35□□□□□ -1.71
SHU2YDR078C CET1O13297 549 aaPredicted RBP4.34□□□□□ -1.71
SHU2YDR078C GCN4P03069 281 aa4.34□□□□□ -1.71
SHU2YDR078C RPL7AP05737 244 aaKnown RBP4.34□□□□□ -1.71
SHU2YDR078C STE12P13574 688 aa4.34□□□□□ -1.71
SHU2YDR078C PMA2P19657 947 aa4.34□□□□□ -1.71
SHU2YDR078C YCK1P23291 538 aa4.34□□□□□ -1.71
SHU2YDR078C YSP3P25036 478 aa4.34□□□□□ -1.71
SHU2YDR078C RRP43P25359 394 aaPredicted RBP4.34□□□□□ -1.71
SHU2YDR078C CDC15P27636 974 aa4.34□□□□□ -1.71
SHU2YDR078C LAC1P28496 418 aa4.34□□□□□ -1.71
SHU2YDR078C NFU1P32860 256 aa4.34□□□□□ -1.71
SHU2YDR078C VBA2P38358 474 aaKnown RBP4.34□□□□□ -1.71
SHU2YDR078C NPR2P39923 615 aa4.34□□□□□ -1.71
SHU2YDR078C MRPL19P53875 158 aa4.34□□□□□ -1.71
SHU2YDR078C FCP1Q03254 732 aa4.34□□□□□ -1.71
SHU2YDR078C TAF11Q04226 346 aa4.34□□□□□ -1.71
SHU2YDR078C PLM2Q04383 521 aa4.34□□□□□ -1.71
SHU2YDR078C YDR109CQ04585 715 aa4.34□□□□□ -1.71
SHU2YDR078C SKG3Q06315 1026 aa4.34□□□□□ -1.71
SHU2YDR078C CRN1Q06440 651 aa4.34□□□□□ -1.71
SHU2YDR078C CIR2Q08822 631 aa4.34□□□□□ -1.71
SHU2YDR078C NMD4Q12129 218 aa4.34□□□□□ -1.71
SHU2YDR078C RPL7BQ12213 244 aaKnown RBP4.34□□□□□ -1.71
SHU2YDR078C AHA1Q12449 350 aaKnown RBP4.34□□□□□ -1.71
SHU2YDR078C KAR3P17119 729 aa4.33□□□□□ -1.72
SHU2YDR078C PGS1P25578 521 aa4.33□□□□□ -1.72
SHU2YDR078C RTS1P38903 757 aa4.33□□□□□ -1.72
SHU2YDR078C SAP1P39955 897 aaKnown RBP4.33□□□□□ -1.72
SHU2YDR078C PHM8P40025 321 aa4.33□□□□□ -1.72
SHU2YDR078C JHD1P40034 492 aa4.33□□□□□ -1.72
SHU2YDR078C ATF1P40353 525 aa4.33□□□□□ -1.72
SHU2YDR078C SEC24P40482 926 aaKnown RBP4.33□□□□□ -1.72
SHU2YDR078C OPT1P40897 799 aa4.33□□□□□ -1.72
SHU2YDR078C YFL015CP43578 164 aa4.33□□□□□ -1.72
SHU2YDR078C RMD8P43620 662 aa4.33□□□□□ -1.72
SHU2YDR078C MRX6P48564 524 aa4.33□□□□□ -1.72
SHU2YDR078C GND2P53319 492 aa4.33□□□□□ -1.72
SHU2YDR078C DCP2P53550 970 aaKnown RBP4.33□□□□□ -1.72
SHU2YDR078C VPS75P53853 264 aa4.33□□□□□ -1.72
SHU2YDR078C YAT1P80235 687 aa4.33□□□□□ -1.72
SHU2YDR078C NGL3Q03210 505 aa4.33□□□□□ -1.72
SHU2YDR078C HRD3Q05787 833 aa4.33□□□□□ -1.72
SHU2YDR078C SWA2Q06677 668 aa4.33□□□□□ -1.72
SHU2YDR078C CTI6Q08923 506 aa4.33□□□□□ -1.72
SHU2YDR078C MRH1Q12117 320 aaPredicted RBP4.33□□□□□ -1.72
SHU2YDR078C SCM3Q12334 223 aa4.33□□□□□ -1.72
SHU2YDR078C YBR085C-AO43137 85 aa4.32□□□□□ -1.72
SHU2YDR078C SES1P07284 462 aaKnown RBP4.32□□□□□ -1.72
SHU2YDR078C YJU2P28320 278 aaPredicted RBP4.32□□□□□ -1.72
SHU2YDR078C ARF3P40994 183 aaRIP-Chip data4.32□□□□□ -1.72not detected
SHU2YDR078C TDA10P42938 290 aa4.32□□□□□ -1.72
SHU2YDR078C SWP82P43554 623 aa4.32□□□□□ -1.72
SHU2YDR078C VTC2P43585 828 aa4.32□□□□□ -1.72
SHU2YDR078C DSD1P53095 428 aa4.32□□□□□ -1.72
SHU2YDR078C YRB30P53107 440 aaPredicted RBP4.32□□□□□ -1.72
SHU2YDR078C ADE16P54113 591 aaKnown RBP4.32□□□□□ -1.72
SHU2YDR078C AAT1Q01802 451 aa4.32□□□□□ -1.72
SHU2YDR078C INA17Q02888 182 aa4.32□□□□□ -1.72
SHU2YDR078C TMN2Q04562 672 aa4.32□□□□□ -1.72
SHU2YDR078C ARG7Q04728 441 aa4.32□□□□□ -1.72
SHU2YDR078C YLR287CQ05881 355 aa4.32□□□□□ -1.72
SHU2YDR078C GPN2Q08726 347 aaPredicted RBP4.32□□□□□ -1.72
SHU2YDR078C RCN2Q12044 265 aa4.32□□□□□ -1.72
SHU2YDR078C ERP4Q12450 207 aa4.32□□□□□ -1.72
SHU2YDR078C YMR084WA2P2R3 262 aa4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms