RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeast

Gene PRP11, Length 801 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP11	YDL043C	PHO12	P38693	467 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	SMC2	P38989	1170 aa	Known RBP	4.08	□□□□□ -1.76
PRP11	YDL043C	SHC1	P39000	512 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	FMP52	P40008	231 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	MET18	P40469	1032 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	LYS14	P40971	790 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	VTC2	P43585	828 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	ARC1	P46672	376 aa	Known RBP	4.08	□□□□□ -1.76
PRP11	YDL043C	COG1	P53079	417 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	YGR016W	P53209	190 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	FHN1	P53279	174 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	IST1	P53843	298 aa	Predicted RBP	4.08	□□□□□ -1.76
PRP11	YDL043C	REX2	P54964	269 aa	Known RBP	4.08	□□□□□ -1.76
PRP11	YDL043C	PNG1	Q02890	363 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	TY2A-DR2	Q03483	438 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	TDA9	Q04545	1251 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	RCO1	Q04779	684 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	YLR352W	Q06479	807 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	FRE5	Q08908	694 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	MLH3	Q12083	715 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	TY2A-B	Q12260	438 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	TY2A-OR2	Q12293	438 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	TY2A-DR1	Q12392	438 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	TY2A-OR1	Q12439	438 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	TY2A-DR3	Q99303	438 aa		4.08	□□□□□ -1.76
PRP11	YDL043C	SSK22	P25390	1331 aa	Predicted RBP	4.07	□□□□□ -1.76
PRP11	YDL043C	KSS1	P14681	368 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	HNM1	P19807	563 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	ERG4	P25340	473 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	AAD3	P25612	363 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	FUB1	P25659	250 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	BUD14	P27637	709 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	CAP1	P28495	268 aa	Known RBP	4.07	□□□□□ -1.76
PRP11	YDL043C	YKL050C	P35736	922 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	HSM3	P38348	480 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	YER034W	P40022	185 aa	Known RBP	4.07	□□□□□ -1.76
PRP11	YDL043C	IAH1	P41734	238 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	IRC6	P43615	237 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	TAM41	P53230	385 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	MRPL19	P53875	158 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	EFR3	Q03653	782 aa	Known RBP	4.07	□□□□□ -1.76
PRP11	YDL043C	FUS2	Q05670	677 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	SSQ1	Q05931	657 aa	Predicted RBP	4.07	□□□□□ -1.76
PRP11	YDL043C	ARV1	Q06541	321 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	TAH18	Q12181	623 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	RIO1	Q12196	484 aa	Known RBP	4.07	□□□□□ -1.76
PRP11	YDL043C	SCM3	Q12334	223 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	YRM1	Q12340	786 aa		4.07	□□□□□ -1.76
PRP11	YDL043C	JIP3	O13555	125 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	ATP2	P00830	511 aa	Known RBP	4.06	□□□□□ -1.76
PRP11	YDL043C	PMA1	P05030	918 aa	Known RBP	4.06	□□□□□ -1.76
PRP11	YDL043C	RPL19A	P0CX82	189 aa	Known RBP	4.06	□□□□□ -1.76
PRP11	YDL043C	RPL19B	P0CX83	189 aa	Predicted RBP	4.06	□□□□□ -1.76
PRP11	YDL043C	ABF1	P14164	731 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	THR1	P17423	357 aa	Known RBP	4.06	□□□□□ -1.76
PRP11	YDL043C	OLE1	P21147	510 aa	Known RBP	4.06	□□□□□ -1.76
PRP11	YDL043C	EFT1	P32324	842 aa	Known RBP	4.06	□□□□□ -1.76
PRP11	YDL043C	MRP20	P32387	263 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	DPH5	P32469	300 aa	Predicted RBP	4.06	□□□□□ -1.76
PRP11	YDL043C	SAC6	P32599	642 aa	Known RBP	4.06	□□□□□ -1.76
PRP11	YDL043C	PTR2	P32901	601 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	RXT2	P38255	430 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	MED8	P38304	223 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	MTW1	P39731	289 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	MAM1	P40065	302 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	SKP2	P42843	763 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	LSG1	P53145	640 aa	Known RBP	4.06	□□□□□ -1.76
PRP11	YDL043C	YNL144C	P53907	740 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	TIM10	P87108	93 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	VPS60	Q03390	229 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	RRN11	Q04712	507 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	ORM2	Q06144	216 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	VIP1	Q06685	1146 aa	Known RBP	4.06	□□□□□ -1.76
PRP11	YDL043C	YDL086W	Q07505	273 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	SEC39	Q12745	709 aa		4.06	□□□□□ -1.76
PRP11	YDL043C	TUB2	P02557	457 aa	Known RBP	4.05	□□□□□ -1.76
PRP11	YDL043C	CDC24	P11433	854 aa	Predicted RBP	4.05	□□□□□ -1.76
PRP11	YDL043C	SPO16	P17122	198 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	SGF29	P25554	259 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	PGS1	P25578	521 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	URK1	P27515	501 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	ELF1	P36053	145 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	UBP13	P38187	747 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	TDP1	P38319	544 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	YBR225W	P38321	900 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	SDH8	P38345	138 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	ERC1	P38767	581 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	YHR097C	P38809	366 aa	Known RBP	4.05	□□□□□ -1.76
PRP11	YDL043C	PSD1	P39006	500 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	NPR2	P39923	615 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	FMP10	P40098	244 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	GCD10	P41814	478 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	ASE1	P50275	885 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	DUO1	P53168	247 aa	Known RBP	4.05	□□□□□ -1.76
PRP11	YDL043C	RSC1	P53236	928 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	YGR151C	P53287	111 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	DCP2	P53550	970 aa	Known RBP	4.05	□□□□□ -1.76
PRP11	YDL043C	LSC1	P53598	329 aa	Known RBP	4.05	□□□□□ -1.76
PRP11	YDL043C	YNL050C	P53952	270 aa		4.05	□□□□□ -1.76
PRP11	YDL043C	REG1	Q00816	1014 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms