RNA–Protein interactions for RNA: YDL036C

PUS9, Transcript of Mitochondrial tRNA:pseudouridine synthase, yeast

Gene PUS9, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUS9	YDL036C	COQ6	P53318	479 aa		4.87	□□□□□ -1.63
PUS9	YDL036C	YNL092W	P53934	400 aa		4.87	□□□□□ -1.63
PUS9	YDL036C	PRS5	Q12265	496 aa	Known RBP	4.87	□□□□□ -1.63
PUS9	YDL036C	MDM20	Q12387	796 aa	Known RBP	4.87	□□□□□ -1.63
PUS9	YDL036C	ZPS1	Q12512	249 aa		4.87	□□□□□ -1.63
PUS9	YDL036C	CHO2	P05374	869 aa	Known RBP	4.86	□□□□□ -1.63
PUS9	YDL036C	YML003W	P0CF16	290 aa		4.86	□□□□□ -1.63
PUS9	YDL036C	MET8	P15807	274 aa		4.86	□□□□□ -1.63
PUS9	YDL036C	PRE8	P23639	250 aa		4.86	□□□□□ -1.63
PUS9	YDL036C	FMP10	P40098	244 aa		4.86	□□□□□ -1.63
PUS9	YDL036C	PFK26	P40433	827 aa	Known RBP	4.86	□□□□□ -1.63
PUS9	YDL036C	DJP1	P40564	432 aa		4.86	□□□□□ -1.63
PUS9	YDL036C	STB2	P46679	850 aa		4.86	□□□□□ -1.63
PUS9	YDL036C	AAD10	P47182	288 aa		4.86	□□□□□ -1.63
PUS9	YDL036C	SPC19	Q03954	165 aa		4.86	□□□□□ -1.63
PUS9	YDL036C	YDL242W	Q07746	117 aa		4.86	□□□□□ -1.63
PUS9	YDL036C	HUA2	Q12134	243 aa		4.86	□□□□□ -1.63
PUS9	YDL036C	YOR111W	Q99210	232 aa		4.86	□□□□□ -1.63
PUS9	YDL036C	AMD2	P22580	549 aa		4.85	□□□□□ -1.63
PUS9	YDL036C	SIP1	P32578	815 aa		4.85	□□□□□ -1.63
PUS9	YDL036C	TFC3	P34111	1160 aa		4.85	□□□□□ -1.63
PUS9	YDL036C	RPF2	P36160	344 aa	Known RBP	4.85	□□□□□ -1.63
PUS9	YDL036C	YMC2	P38087	329 aa		4.85	□□□□□ -1.63
PUS9	YDL036C	YGR079W	P53249	370 aa		4.85	□□□□□ -1.63
PUS9	YDL036C	MPS1	P54199	764 aa		4.85	□□□□□ -1.63
PUS9	YDL036C	YSA1	Q01976	231 aa		4.85	□□□□□ -1.63
PUS9	YDL036C	UBP16	Q02863	499 aa		4.85	□□□□□ -1.63
PUS9	YDL036C	MUB1	Q03162	620 aa		4.85	□□□□□ -1.63
PUS9	YDL036C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
PUS9	YDL036C	BAG7	Q12128	409 aa		4.85	□□□□□ -1.63
PUS9	YDL036C	CPA2	P03965	1118 aa	Known RBP	4.84	□□□□□ -1.63
PUS9	YDL036C	ERG11	P10614	530 aa		4.84	□□□□□ -1.63
PUS9	YDL036C	OLE1	P21147	510 aa	Known RBP	4.84	□□□□□ -1.63
PUS9	YDL036C	RNR3	P21672	869 aa	Known RBP	4.84	□□□□□ -1.63
PUS9	YDL036C	SGF29	P25554	259 aa		4.84	□□□□□ -1.63
PUS9	YDL036C	MTG2	P38860	518 aa		4.84	□□□□□ -1.63
PUS9	YDL036C	FUN12	P39730	1002 aa	Known RBP	4.84	□□□□□ -1.63
PUS9	YDL036C	MIT1	P40002	666 aa		4.84	□□□□□ -1.63
PUS9	YDL036C	SLZ1	P40167	298 aa		4.84	□□□□□ -1.63
PUS9	YDL036C	LTP1	P40347	161 aa		4.84	□□□□□ -1.63
PUS9	YDL036C	DUO1	P53168	247 aa	Known RBP	4.84	□□□□□ -1.63
PUS9	YDL036C	CPR8	P53728	308 aa		4.84	□□□□□ -1.63
PUS9	YDL036C	YML119W	Q03208	357 aa		4.84	□□□□□ -1.63
PUS9	YDL036C	TDA9	Q04545	1251 aa		4.84	□□□□□ -1.63
PUS9	YDL036C	ENT4	Q07872	247 aa		4.84	□□□□□ -1.63
PUS9	YDL036C	PSK2	Q08217	1101 aa		4.84	□□□□□ -1.63
PUS9	YDL036C	TAH18	Q12181	623 aa		4.84	□□□□□ -1.63
PUS9	YDL036C	YBR126W-A	Q8TGU7	68 aa		4.84	□□□□□ -1.63
PUS9	YDL036C	FOB1	O13329	566 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	CDC15	P27636	974 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	SRB5	P32585	307 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	HES1	P35843	434 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	ALY1	P36117	915 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	YBL029W	P38201	376 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	YBR225W	P38321	900 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	XBP1	P40489	647 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	IRC6	P43615	237 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	SGM1	P47166	707 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	YGL117W	P53133	265 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	COG2	P53271	262 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	VIP1	Q06685	1146 aa	Known RBP	4.83	□□□□□ -1.64
PUS9	YDL036C	YPL191C	Q08930	360 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	LCB4	Q12246	624 aa		4.83	□□□□□ -1.64
PUS9	YDL036C	TPK2	P06245	380 aa		4.82	□□□□□ -1.64
PUS9	YDL036C	SEC53	P07283	254 aa	Known RBP	4.82	□□□□□ -1.64
PUS9	YDL036C	RFA2	P26754	273 aa	Known RBP	4.82	□□□□□ -1.64
PUS9	YDL036C	MRPL9	P31334	269 aa		4.82	□□□□□ -1.64
PUS9	YDL036C	ERC1	P38767	581 aa		4.82	□□□□□ -1.64
PUS9	YDL036C	UBX6	P47049	396 aa		4.82	□□□□□ -1.64
PUS9	YDL036C	NPA3	P47122	385 aa		4.82	□□□□□ -1.64
PUS9	YDL036C	MRK1	P50873	501 aa		4.82	□□□□□ -1.64
PUS9	YDL036C	PIL1	P53252	339 aa	Known RBP	4.82	□□□□□ -1.64
PUS9	YDL036C	YNR061C	P53747	219 aa		4.82	□□□□□ -1.64
PUS9	YDL036C	FCP1	Q03254	732 aa		4.82	□□□□□ -1.64
PUS9	YDL036C	RAD30	Q04049	632 aa		4.82	□□□□□ -1.64
PUS9	YDL036C	NOP58	Q12499	511 aa	Known RBP	4.82	□□□□□ -1.64
PUS9	YDL036C	COX1	P00401	534 aa		4.81	□□□□□ -1.64
PUS9	YDL036C	GCN4	P03069	281 aa		4.81	□□□□□ -1.64
PUS9	YDL036C	SUI3	P09064	285 aa	Known RBP	4.81	□□□□□ -1.64
PUS9	YDL036C	GDA1	P32621	518 aa		4.81	□□□□□ -1.64
PUS9	YDL036C	RGT1	P32862	1170 aa		4.81	□□□□□ -1.64
PUS9	YDL036C	KTR3	P38130	404 aa	Predicted RBP	4.81	□□□□□ -1.64
PUS9	YDL036C	IME4	P41833	600 aa		4.81	□□□□□ -1.64
PUS9	YDL036C	MSY1	P48527	492 aa		4.81	□□□□□ -1.64
PUS9	YDL036C	DCP2	P53550	970 aa	Known RBP	4.81	□□□□□ -1.64
PUS9	YDL036C	ARE2	P53629	642 aa	Known RBP	4.81	□□□□□ -1.64
PUS9	YDL036C	MRPL19	P53875	158 aa		4.81	□□□□□ -1.64
PUS9	YDL036C	INN1	P53901	409 aa		4.81	□□□□□ -1.64
PUS9	YDL036C	TIM10	P87108	93 aa		4.81	□□□□□ -1.64
PUS9	YDL036C	WAR1	Q03631	944 aa		4.81	□□□□□ -1.64
PUS9	YDL036C	SLK19	Q08581	821 aa	Known RBP	4.81	□□□□□ -1.64
PUS9	YDL036C	NMD4	Q12129	218 aa		4.81	□□□□□ -1.64
PUS9	YDL036C	SCM3	Q12334	223 aa		4.81	□□□□□ -1.64
PUS9	YDL036C	AI5_ALPHA	Q9ZZX1	630 aa		4.81	□□□□□ -1.64
PUS9	YDL036C	PGS1	P25578	521 aa		4.8	□□□□□ -1.64
PUS9	YDL036C	VBA2	P38358	474 aa	Known RBP	4.8	□□□□□ -1.64
PUS9	YDL036C	MUP3	P38734	546 aa		4.8	□□□□□ -1.64
PUS9	YDL036C	FLC2	P39719	783 aa		4.8	□□□□□ -1.64
PUS9	YDL036C	OPT1	P40897	799 aa		4.8	□□□□□ -1.64
PUS9	YDL036C	ASN1	P49089	572 aa	Known RBP	4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms