RNA–Protein interactions for RNA: YDL006W

PTC1, Transcript of Type 2C protein phosphatase (PP2C), yeastyeast

Gene PTC1, Length 846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTC1YDL006W CLB4P24871 460 aa5.07□□□□□ -1.6
PTC1YDL006W SWC3P31376 625 aa5.07□□□□□ -1.6
PTC1YDL006W EMP70P32802 667 aa5.07□□□□□ -1.6
PTC1YDL006W MRPL36P36531 177 aa5.07□□□□□ -1.6
PTC1YDL006W ASN1P49089 572 aaKnown RBP5.07□□□□□ -1.6
PTC1YDL006W YGL082WP53155 381 aa5.07□□□□□ -1.6
PTC1YDL006W ARC35P53731 342 aaKnown RBP5.07□□□□□ -1.6
PTC1YDL006W APM1Q00776 475 aaPredicted RBP5.07□□□□□ -1.6
PTC1YDL006W YPL108WQ02872 168 aaPredicted RBP5.07□□□□□ -1.6
PTC1YDL006W CSI1Q04368 295 aa5.07□□□□□ -1.6
PTC1YDL006W RAD24P32641 659 aa5.06□□□□□ -1.6
PTC1YDL006W YBR138CP38277 524 aa5.06□□□□□ -1.6
PTC1YDL006W YNG2P38806 282 aaKnown RBP5.06□□□□□ -1.6
PTC1YDL006W ARB1P40024 610 aaKnown RBP5.06□□□□□ -1.6
PTC1YDL006W BST1P43571 1029 aa5.06□□□□□ -1.6
PTC1YDL006W MRPL13Q02204 264 aa5.06□□□□□ -1.6
PTC1YDL006W TRS130Q03660 1102 aa5.06□□□□□ -1.6
PTC1YDL006W YMR084WA2P2R3 262 aa5.05□□□□□ -1.6
PTC1YDL006W RPS19AP07280 144 aaKnown RBP5.05□□□□□ -1.6
PTC1YDL006W RPS19BP07281 144 aaPredicted RBP5.05□□□□□ -1.6
PTC1YDL006W NCP1P16603 691 aaKnown RBP5.05□□□□□ -1.6
PTC1YDL006W RNR3P21672 869 aaKnown RBP5.05□□□□□ -1.6
PTC1YDL006W SWI4P25302 1093 aaKnown RBP5.05□□□□□ -1.6
PTC1YDL006W SAT4P25333 603 aaKnown RBP5.05□□□□□ -1.6
PTC1YDL006W ILV6P25605 309 aaKnown RBP5.05□□□□□ -1.6
PTC1YDL006W UGP1P32861 499 aaKnown RBP5.05□□□□□ -1.6
PTC1YDL006W LNP1P38878 278 aa5.05□□□□□ -1.6
PTC1YDL006W LAS21P40367 830 aa5.05□□□□□ -1.6
PTC1YDL006W OPT1P40897 799 aa5.05□□□□□ -1.6
PTC1YDL006W ECM16Q04217 1267 aaKnown RBP5.05□□□□□ -1.6
PTC1YDL006W CRF1Q04930 467 aa5.05□□□□□ -1.6
PTC1YDL006W YBR255C-AQ3E776 120 aa5.05□□□□□ -1.6
PTC1YDL006W YER175W-AQ8TGU4 54 aa5.05□□□□□ -1.6
PTC1YDL006W RIM15P43565 1770 aa5.05□□□□□ -1.6
PTC1YDL006W SWI1P09547 1314 aa5.04□□□□□ -1.6
PTC1YDL006W CHO2P05374 869 aaKnown RBP5.04□□□□□ -1.6
PTC1YDL006W SUP35P05453 685 aaKnown RBP5.04□□□□□ -1.6
PTC1YDL006W RPL7AP05737 244 aaKnown RBP5.04□□□□□ -1.6
PTC1YDL006W LPD1P09624 499 aaKnown RBP5.04□□□□□ -1.6
PTC1YDL006W PET122P10355 254 aa5.04□□□□□ -1.6
PTC1YDL006W STE12P13574 688 aa5.04□□□□□ -1.6
PTC1YDL006W PMA2P19657 947 aa5.04□□□□□ -1.6
PTC1YDL006W UBC1P21734 215 aaKnown RBP5.04□□□□□ -1.6
PTC1YDL006W PDE1P22434 369 aa5.04□□□□□ -1.6
PTC1YDL006W SPO11P23179 398 aa5.04□□□□□ -1.6
PTC1YDL006W ARP2P32381 391 aaKnown RBP5.04□□□□□ -1.6
PTC1YDL006W PSY4P38193 441 aa5.04□□□□□ -1.6
PTC1YDL006W PAC2P39937 518 aa5.04□□□□□ -1.6
PTC1YDL006W SMK1P41808 388 aa5.04□□□□□ -1.6
PTC1YDL006W ERR3P42222 437 aa5.04□□□□□ -1.6
PTC1YDL006W GTR1Q00582 310 aa5.04□□□□□ -1.6
PTC1YDL006W GIS1Q03833 894 aa5.04□□□□□ -1.6
PTC1YDL006W CTI6Q08923 506 aa5.04□□□□□ -1.6
PTC1YDL006W ICL2Q12031 575 aa5.04□□□□□ -1.6
PTC1YDL006W RPL7BQ12213 244 aaKnown RBP5.04□□□□□ -1.6
PTC1YDL006W SUT2Q12286 268 aa5.04□□□□□ -1.6
PTC1YDL006W YPK1P12688 680 aaKnown RBP5.03□□□□□ -1.6
PTC1YDL006W ADY2P25613 283 aa5.03□□□□□ -1.6
PTC1YDL006W EXO84P38261 753 aa5.03□□□□□ -1.6
PTC1YDL006W PSF2P40359 213 aa5.03□□□□□ -1.6
PTC1YDL006W YNL092WP53934 400 aa5.03□□□□□ -1.6
PTC1YDL006W ARG7Q04728 441 aa5.03□□□□□ -1.6
PTC1YDL006W TFC6Q06339 672 aa5.03□□□□□ -1.6
PTC1YDL006W ULA1Q12059 462 aa5.03□□□□□ -1.6
PTC1YDL006W NUC1P08466 329 aa5.02□□□□□ -1.61
PTC1YDL006W IML2P47031 731 aa5.02□□□□□ -1.61
PTC1YDL006W CTF18P49956 741 aa5.02□□□□□ -1.61
PTC1YDL006W YML131WQ03102 365 aa5.02□□□□□ -1.61
PTC1YDL006W GTB1Q04924 702 aa5.02□□□□□ -1.61
PTC1YDL006W CSR1Q06705 408 aaKnown RBP5.02□□□□□ -1.61
PTC1YDL006W DIB1Q06819 143 aaPredicted RBP5.02□□□□□ -1.61
PTC1YDL006W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.02□□□□□ -1.61not detected
PTC1YDL006W SUL2Q12325 893 aa5.02□□□□□ -1.61
PTC1YDL006W RPA135P22138 1203 aaKnown RBP5.01□□□□□ -1.61
PTC1YDL006W GCD7P32502 381 aaPredicted RBP5.01□□□□□ -1.61
PTC1YDL006W ARO9P38840 513 aaPredicted RBP5.01□□□□□ -1.61
PTC1YDL006W SKP2P42843 763 aa5.01□□□□□ -1.61
PTC1YDL006W WAR1Q03631 944 aa5.01□□□□□ -1.61
PTC1YDL006W VAM6Q07468 1049 aa5.01□□□□□ -1.61
PTC1YDL006W NCB2Q92317 146 aa5.01□□□□□ -1.61
PTC1YDL006W SSK22P25390 1331 aaPredicted RBP5□□□□□ -1.61
PTC1YDL006W AMD2P22580 549 aa5□□□□□ -1.61
PTC1YDL006W MRPL9P31334 269 aa5□□□□□ -1.61
PTC1YDL006W RPT3P33298 428 aaKnown RBP5□□□□□ -1.61
PTC1YDL006W TDA10P42938 290 aa5□□□□□ -1.61
PTC1YDL006W YFL015CP43578 164 aa5□□□□□ -1.61
PTC1YDL006W COG2P53271 262 aa5□□□□□ -1.61
PTC1YDL006W FCP1Q03254 732 aa5□□□□□ -1.61
PTC1YDL006W ATG23Q06671 453 aa5□□□□□ -1.61
PTC1YDL006W IRC3Q06683 689 aa5□□□□□ -1.61
PTC1YDL006W YDL242WQ07746 117 aa5□□□□□ -1.61
PTC1YDL006W RIX7Q07844 837 aaKnown RBP5□□□□□ -1.61
PTC1YDL006W PCL8Q08966 492 aa5□□□□□ -1.61
PTC1YDL006W LCB4Q12246 624 aa5□□□□□ -1.61
PTC1YDL006W SNU66Q12420 587 aaPredicted RBP5□□□□□ -1.61
PTC1YDL006W ADE5,7P07244 802 aaKnown RBP4.99□□□□□ -1.61
PTC1YDL006W HEM1P09950 548 aaPredicted RBP4.99□□□□□ -1.61
PTC1YDL006W RAD16P31244 790 aa4.99□□□□□ -1.61
PTC1YDL006W YMC1P32331 307 aa4.99□□□□□ -1.61
PTC1YDL006W SSH4P32343 579 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms