RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	YBR225W	P38321	900 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	MTG2	P38860	518 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	STN1	P38960	494 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	GIP2	P40036	548 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	YER186C	P40101	306 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	YIL165C	P40446	119 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	DPH1	P40487	425 aa	Known RBP	6.25	□□□□□ -1.41
RSA4	YCR072C	BIR1	P47134	954 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	OCA1	P50946	238 aa	Predicted RBP	6.25	□□□□□ -1.41
RSA4	YCR072C	RMR1	P53060	241 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	ZIP2	P53061	704 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	USE1	P53146	245 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	ELA1	P53861	379 aa	Predicted RBP	6.25	□□□□□ -1.41
RSA4	YCR072C	SNZ1	Q03148	297 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	SPC19	Q03954	165 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	RAD30	Q04049	632 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	BUD22	Q04347	519 aa	Known RBP	6.25	□□□□□ -1.41
RSA4	YCR072C	URC2	Q04411	772 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	CWC2	Q12046	339 aa	Predicted RBP	6.25	□□□□□ -1.41
RSA4	YCR072C	VPS54	Q12071	889 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	YIL002W-A	Q3E7Z5	69 aa		6.25	□□□□□ -1.41
RSA4	YCR072C	MF(ALPHA)1	P01149	165 aa		6.24	□□□□□ -1.41
RSA4	YCR072C	SWI4	P25302	1093 aa	Known RBP	6.24	□□□□□ -1.41
RSA4	YCR072C	RSC6	P25632	483 aa		6.24	□□□□□ -1.41
RSA4	YCR072C	PRP19	P32523	503 aa	Known RBP	6.24	□□□□□ -1.41
RSA4	YCR072C	VPS51	P36116	164 aa		6.24	□□□□□ -1.41
RSA4	YCR072C	NTR2	P36118	322 aa	Predicted RBP	6.24	□□□□□ -1.41
RSA4	YCR072C	SDH8	P38345	138 aa		6.24	□□□□□ -1.41
RSA4	YCR072C	RIM4	P38741	713 aa		6.24	□□□□□ -1.41
RSA4	YCR072C	GEM1	P39722	662 aa		6.24	□□□□□ -1.41
RSA4	YCR072C	GPP2	P40106	250 aa	Known RBP	6.24	□□□□□ -1.41
RSA4	YCR072C	IRC5	P43610	853 aa		6.24	□□□□□ -1.41
RSA4	YCR072C	BNA3	P47039	444 aa	Known RBP	6.24	□□□□□ -1.41
RSA4	YCR072C	MDE1	P47095	244 aa		6.24	□□□□□ -1.41
RSA4	YCR072C	MTQ2	Q03920	221 aa	Predicted RBP	6.24	□□□□□ -1.41
RSA4	YCR072C	SMD2	Q06217	110 aa	Known RBP	6.24	□□□□□ -1.41
RSA4	YCR072C	VPS36	Q06696	566 aa		6.24	□□□□□ -1.41
RSA4	YCR072C	APM4	Q99186	491 aa		6.24	□□□□□ -1.41
RSA4	YCR072C	VCX1	Q99385	411 aa		6.24	□□□□□ -1.41
RSA4	YCR072C	IPP1	P00817	287 aa	Known RBP	6.23	□□□□□ -1.41
RSA4	YCR072C	HSF1	P10961	833 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	HMG2	P12684	1045 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	6.23	□□□□□ -1.41	not detected
RSA4	YCR072C	VPS3	P23643	1011 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	AGP1	P25376	633 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	CRM1	P30822	1084 aa	Known RBP	6.23	□□□□□ -1.41
RSA4	YCR072C	PTR2	P32901	601 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	MOT2	P34909	587 aa	Known RBP	6.23	□□□□□ -1.41
RSA4	YCR072C	CLG1	P35190	452 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	RPC25	P35718	212 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	RSM22	P36056	628 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	ETR1	P38071	380 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	CCT3	P39077	534 aa	Known RBP	6.23	□□□□□ -1.41
RSA4	YCR072C	OAF1	P39720	1047 aa	Predicted RBP	6.23	□□□□□ -1.41
RSA4	YCR072C	NMD5	P46970	1048 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	UTP8	P53276	713 aa	Known RBP	6.23	□□□□□ -1.41
RSA4	YCR072C	IMP4	P53941	290 aa	Known RBP	6.23	□□□□□ -1.41
RSA4	YCR072C	MLC2	Q06580	163 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	RSC3	Q06639	885 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	ADY3	Q07732	790 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	ALE1	Q08548	619 aa		6.23	□□□□□ -1.41
RSA4	YCR072C	PUS7	Q08647	676 aa	Known RBP	6.23	□□□□□ -1.41
RSA4	YCR072C	ERG11	P10614	530 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	KRR1	P25586	316 aa	Predicted RBP	6.22	□□□□□ -1.41
RSA4	YCR072C	PGM1	P33401	570 aa	Known RBP	6.22	□□□□□ -1.41
RSA4	YCR072C	LRG1	P35688	1017 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	MCD4	P36051	919 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	RCK2	P38623	610 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	DIA4	P38705	446 aa	Predicted RBP	6.22	□□□□□ -1.41
RSA4	YCR072C	HXT8	P40886	569 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	ERR3	P42222	437 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	MEP3	P53390	489 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	ZRG17	P53735	605 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	ORC4	P54791	529 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	DIG1	Q03063	452 aa	Known RBP	6.22	□□□□□ -1.41
RSA4	YCR072C	FMN1	Q03778	218 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	RVB1	Q03940	463 aa	Known RBP	6.22	□□□□□ -1.41
RSA4	YCR072C	YDR286C	Q05530	114 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	GIC2	Q06648	383 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	YAP7	Q08182	245 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	SGT1	Q08446	395 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	RCN2	Q12044	265 aa		6.22	□□□□□ -1.41
RSA4	YCR072C	RTC5	Q12108	567 aa	Known RBP	6.22	□□□□□ -1.41
RSA4	YCR072C	GET3	Q12154	354 aa	Known RBP	6.22	□□□□□ -1.41
RSA4	YCR072C	ILV2	P07342	687 aa	Known RBP	6.21	□□□□□ -1.42
RSA4	YCR072C	MSD1	P15179	658 aa	Known RBP	6.21	□□□□□ -1.42
RSA4	YCR072C	DBP3	P20447	523 aa	Known RBP	6.21	□□□□□ -1.42
RSA4	YCR072C	DBP5	P20449	482 aa	Known RBP	6.21	□□□□□ -1.42
RSA4	YCR072C	AAD3	P25612	363 aa		6.21	□□□□□ -1.42
RSA4	YCR072C	ZIP1	P31111	875 aa		6.21	□□□□□ -1.42
RSA4	YCR072C	DPH2	P32461	534 aa		6.21	□□□□□ -1.42
RSA4	YCR072C	UBP11	P36026	717 aa		6.21	□□□□□ -1.42
RSA4	YCR072C	KAP104	P38217	918 aa	Known RBP	6.21	□□□□□ -1.42
RSA4	YCR072C	RFS1	P38234	210 aa	Known RBP	6.21	□□□□□ -1.42
RSA4	YCR072C	YBR138C	P38277	524 aa		6.21	□□□□□ -1.42
RSA4	YCR072C	DSS1	P39112	969 aa		6.21	□□□□□ -1.42
RSA4	YCR072C	MBP1	P39678	833 aa		6.21	□□□□□ -1.42
RSA4	YCR072C	SSP120	P39931	234 aa	Known RBP	6.21	□□□□□ -1.42
RSA4	YCR072C	DDI1	P40087	428 aa		6.21	□□□□□ -1.42
RSA4	YCR072C	TMA108	P40462	946 aa		6.21	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms