RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B CDC23P16522 626 aa2.04□□□□□ -2.08
HTL1YCR020W-B SEC1P30619 724 aaKnown RBP2.04□□□□□ -2.08
HTL1YCR020W-B YGL081WP53156 320 aa2.04□□□□□ -2.08
HTL1YCR020W-B YGR079WP53249 370 aa2.04□□□□□ -2.08
HTL1YCR020W-B EAF7P53911 425 aaKnown RBP2.04□□□□□ -2.08
HTL1YCR020W-B SMA1Q02651 245 aa2.04□□□□□ -2.08
HTL1YCR020W-B ICL2Q12031 575 aa2.04□□□□□ -2.08
HTL1YCR020W-B YLR049CQ12110 428 aa2.04□□□□□ -2.08
HTL1YCR020W-B GPA1P08539 472 aa2.03□□□□□ -2.08
HTL1YCR020W-B ADH4P10127 382 aa2.03□□□□□ -2.08
HTL1YCR020W-B MRP2P10663 115 aaPredicted RBP2.03□□□□□ -2.08
HTL1YCR020W-B SAN1P22470 610 aa2.03□□□□□ -2.08
HTL1YCR020W-B MGR1P25573 417 aa2.03□□□□□ -2.08
HTL1YCR020W-B RAD24P32641 659 aa2.03□□□□□ -2.08
HTL1YCR020W-B TRS65P32893 560 aa2.03□□□□□ -2.08
HTL1YCR020W-B HES1P35843 434 aa2.03□□□□□ -2.08
HTL1YCR020W-B SDS22P36047 338 aa2.03□□□□□ -2.08
HTL1YCR020W-B YBR071WP38243 211 aa2.03□□□□□ -2.08
HTL1YCR020W-B SAW1P39735 261 aa2.03□□□□□ -2.08
HTL1YCR020W-B YJR120WP47157 116 aa2.03□□□□□ -2.08
HTL1YCR020W-B YRB30P53107 440 aaPredicted RBP2.03□□□□□ -2.08
HTL1YCR020W-B CUL3P53202 744 aa2.03□□□□□ -2.08
HTL1YCR020W-B YDR415CQ04033 374 aaPredicted RBP2.03□□□□□ -2.08
HTL1YCR020W-B CRD1Q07560 283 aa2.03□□□□□ -2.08
HTL1YCR020W-B SLX4Q12098 748 aa2.03□□□□□ -2.08
HTL1YCR020W-B RVB2Q12464 471 aaKnown RBP2.03□□□□□ -2.08
HTL1YCR020W-B GUK1P15454 187 aaKnown RBP2.02□□□□□ -2.09
HTL1YCR020W-B PRO3P32263 286 aaKnown RBP2.02□□□□□ -2.09
HTL1YCR020W-B TFC4P33339 1025 aa2.02□□□□□ -2.09
HTL1YCR020W-B EFM2P38347 419 aa2.02□□□□□ -2.09
HTL1YCR020W-B YEN1P40028 759 aa2.02□□□□□ -2.09
HTL1YCR020W-B YJL070CP40361 888 aa2.02□□□□□ -2.09
HTL1YCR020W-B IMA5P40884 581 aa2.02□□□□□ -2.09
HTL1YCR020W-B ROK1P45818 564 aaPredicted RBP2.02□□□□□ -2.09
HTL1YCR020W-B ATG27P46989 271 aa2.02□□□□□ -2.09
HTL1YCR020W-B IML2P47031 731 aa2.02□□□□□ -2.09
HTL1YCR020W-B IMP4P53941 290 aaKnown RBP2.02□□□□□ -2.09
HTL1YCR020W-B FCP1Q03254 732 aa2.02□□□□□ -2.09
HTL1YCR020W-B PHM6Q05637 104 aa2.02□□□□□ -2.09
HTL1YCR020W-B UTP21Q06078 939 aaPredicted RBP2.02□□□□□ -2.09
HTL1YCR020W-B AAD4Q07747 329 aa2.02□□□□□ -2.09
HTL1YCR020W-B BAR1P12630 587 aa2.01□□□□□ -2.09
HTL1YCR020W-B PDA1P16387 420 aaKnown RBP2.01□□□□□ -2.09
HTL1YCR020W-B PDR3P33200 976 aa2.01□□□□□ -2.09
HTL1YCR020W-B KRE9P39005 276 aa2.01□□□□□ -2.09
HTL1YCR020W-B SWD1P39706 426 aa2.01□□□□□ -2.09
HTL1YCR020W-B YNL181WP53878 407 aa2.01□□□□□ -2.09
HTL1YCR020W-B ADE16P54113 591 aaKnown RBP2.01□□□□□ -2.09
HTL1YCR020W-B RSA1Q08932 381 aa2.01□□□□□ -2.09
HTL1YCR020W-B TMA17Q12513 150 aa2.01□□□□□ -2.09
HTL1YCR020W-B PMS1P14242 873 aa2□□□□□ -2.09
HTL1YCR020W-B YLF2P38746 405 aa2□□□□□ -2.09
HTL1YCR020W-B UBP12P39538 1254 aa2□□□□□ -2.09
HTL1YCR020W-B YPL108WQ02872 168 aaPredicted RBP2□□□□□ -2.09
HTL1YCR020W-B SMA2Q04658 369 aa2□□□□□ -2.09
HTL1YCR020W-B MCP2Q06567 569 aa2□□□□□ -2.09
HTL1YCR020W-B CYB2P00175 591 aa1.99□□□□□ -2.09
HTL1YCR020W-B RPN2P32565 945 aaKnown RBP1.99□□□□□ -2.09
HTL1YCR020W-B RIM2P38127 377 aa1.99□□□□□ -2.09
HTL1YCR020W-B LEU5P38702 357 aa1.99□□□□□ -2.09
HTL1YCR020W-B ASK10P48361 1146 aa1.99□□□□□ -2.09
HTL1YCR020W-B MSY1P48527 492 aa1.99□□□□□ -2.09
HTL1YCR020W-B COG6P53959 839 aa1.99□□□□□ -2.09
HTL1YCR020W-B YLR455WQ06188 304 aa1.99□□□□□ -2.09
HTL1YCR020W-B DAP1Q12091 152 aa1.99□□□□□ -2.09
HTL1YCR020W-B BSC1Q12140 328 aa1.99□□□□□ -2.09
HTL1YCR020W-B RFA2P26754 273 aaKnown RBP1.98□□□□□ -2.09
HTL1YCR020W-B URK1P27515 501 aa1.98□□□□□ -2.09
HTL1YCR020W-B YPK3P38070 525 aa1.98□□□□□ -2.09
HTL1YCR020W-B EXO84P38261 753 aa1.98□□□□□ -2.09
HTL1YCR020W-B CAB2P40506 365 aa1.98□□□□□ -2.09
HTL1YCR020W-B PEX14P53112 341 aa1.98□□□□□ -2.09
HTL1YCR020W-B SGF73P53165 657 aa1.98□□□□□ -2.09
HTL1YCR020W-B PFA5Q03289 374 aa1.98□□□□□ -2.09
HTL1YCR020W-B CSR2Q12734 1121 aa1.98□□□□□ -2.09
HTL1YCR020W-B CPR3P25719 182 aa1.97□□□□□ -2.09
HTL1YCR020W-B MSH1P25846 959 aa1.97□□□□□ -2.09
HTL1YCR020W-B ADE17P38009 592 aaKnown RBP1.97□□□□□ -2.09
HTL1YCR020W-B ENP1P38333 483 aaKnown RBP1.97□□□□□ -2.09
HTL1YCR020W-B TAM41P53230 385 aa1.97□□□□□ -2.09
HTL1YCR020W-B ASI1P54074 624 aa1.97□□□□□ -2.09
HTL1YCR020W-B ATG21Q02887 496 aa1.97□□□□□ -2.09
HTL1YCR020W-B EKI1Q03764 534 aa1.97□□□□□ -2.09
HTL1YCR020W-B GTB1Q04924 702 aa1.97□□□□□ -2.09
HTL1YCR020W-B REV1P12689 985 aa1.96□□□□□ -2.1
HTL1YCR020W-B GCD7P32502 381 aaPredicted RBP1.96□□□□□ -2.1
HTL1YCR020W-B UBP13P38187 747 aa1.96□□□□□ -2.1
HTL1YCR020W-B AZF1P41696 914 aa1.96□□□□□ -2.1
HTL1YCR020W-B MAD3P47074 515 aa1.96□□□□□ -2.1
HTL1YCR020W-B PUS4P48567 403 aaKnown RBP1.96□□□□□ -2.1
HTL1YCR020W-B MTG1Q03151 367 aaPredicted RBP1.96□□□□□ -2.1
HTL1YCR020W-B STP3Q05937 343 aa1.96□□□□□ -2.1
HTL1YCR020W-B YBR298C-AQ8TGK4 73 aa1.96□□□□□ -2.1
HTL1YCR020W-B PCT1P13259 424 aa1.95□□□□□ -2.1
HTL1YCR020W-B TKL1P23254 680 aaKnown RBP1.95□□□□□ -2.1
HTL1YCR020W-B STV1P37296 890 aa1.95□□□□□ -2.1
HTL1YCR020W-B YHR218WP38899 603 aa1.95□□□□□ -2.1
HTL1YCR020W-B DJP1P40564 432 aa1.95□□□□□ -2.1
HTL1YCR020W-B CNM67P53865 581 aaKnown RBP1.95□□□□□ -2.1
HTL1YCR020W-B CTL1Q03220 320 aaKnown RBP1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms