RNA–Protein interactions for RNA: YCR004C

YCP4, Transcript of Protein of unknown function, yeastyeast

Gene YCP4, Length 744 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCP4YCR004C HXT16P47185 567 aa8.35□□□□□ -1.07
YCP4YCR004C HXT15P54854 567 aa8.35□□□□□ -1.07
YCP4YCR004C SYH1Q02875 849 aaKnown RBP8.35□□□□□ -1.07
YCP4YCR004C SIZ1Q04195 904 aa8.35□□□□□ -1.07
YCP4YCR004C HBT1Q07653 1046 aaKnown RBP8.35□□□□□ -1.07
YCP4YCR004C PLB3Q08108 686 aa8.35□□□□□ -1.07
YCP4YCR004C YOL073CQ08232 322 aa8.35□□□□□ -1.07
YCP4YCR004C SFL1P20134 766 aa8.34□□□□□ -1.07
YCP4YCR004C EPT1P22140 391 aa8.34□□□□□ -1.07
YCP4YCR004C EMC1P25574 760 aa8.34□□□□□ -1.07
YCP4YCR004C PRE3P38624 215 aa8.34□□□□□ -1.07
YCP4YCR004C SPC72P39723 622 aa8.34□□□□□ -1.07
YCP4YCR004C ELO3P40319 345 aa8.34□□□□□ -1.07
YCP4YCR004C RGD2P43556 714 aa8.34□□□□□ -1.07
YCP4YCR004C BUD13P46947 266 aaPredicted RBP8.34□□□□□ -1.07
YCP4YCR004C SUR7P54003 302 aa8.34□□□□□ -1.07
YCP4YCR004C CDC14Q00684 551 aa8.34□□□□□ -1.07
YCP4YCR004C ATG16Q03818 150 aa8.34□□□□□ -1.07
YCP4YCR004C CIA1Q05583 330 aa8.34□□□□□ -1.07
YCP4YCR004C BSC6Q08280 497 aa8.34□□□□□ -1.07
YCP4YCR004C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
YCP4YCR004C APA1P16550 321 aaKnown RBP8.33□□□□□ -1.08
YCP4YCR004C AEP1P32493 518 aa8.33□□□□□ -1.08
YCP4YCR004C SPS19P32573 292 aaKnown RBP8.33□□□□□ -1.08
YCP4YCR004C IML3P38265 245 aa8.33□□□□□ -1.08
YCP4YCR004C CYC2P38909 366 aa8.33□□□□□ -1.08
YCP4YCR004C PMC1P38929 1173 aaPredicted RBP8.33□□□□□ -1.08
YCP4YCR004C YMR124WP39523 943 aaKnown RBP8.33□□□□□ -1.08
YCP4YCR004C STR3P53101 465 aaKnown RBP8.33□□□□□ -1.08
YCP4YCR004C YGR021WP53212 290 aa8.33□□□□□ -1.08
YCP4YCR004C ARX1Q03862 593 aaKnown RBP8.33□□□□□ -1.08
YCP4YCR004C STP3Q05937 343 aa8.33□□□□□ -1.08
YCP4YCR004C DIC1Q06143 298 aa8.33□□□□□ -1.08
YCP4YCR004C PUF3Q07807 879 aaKnown RBP RIP-Chip data8.33□□□□□ -1.08not detected
YCP4YCR004C YDR262WQ12331 272 aa8.33□□□□□ -1.08
YCP4YCR004C SPO12P17123 173 aa8.32□□□□□ -1.08
YCP4YCR004C YCR015CP25616 317 aa8.32□□□□□ -1.08
YCP4YCR004C RFA2P26754 273 aaKnown RBP8.32□□□□□ -1.08
YCP4YCR004C PLC1P32383 869 aa8.32□□□□□ -1.08
YCP4YCR004C ARA1P38115 344 aa8.32□□□□□ -1.08
YCP4YCR004C HIS2P38635 335 aa8.32□□□□□ -1.08
YCP4YCR004C RTT107P38850 1070 aa8.32□□□□□ -1.08
YCP4YCR004C FAU1P40099 211 aa8.32□□□□□ -1.08
YCP4YCR004C DJP1P40564 432 aa8.32□□□□□ -1.08
YCP4YCR004C VHS1Q03785 461 aa8.32□□□□□ -1.08
YCP4YCR004C YMR160WQ03823 816 aa8.32□□□□□ -1.08
YCP4YCR004C THI7Q05998 598 aa8.32□□□□□ -1.08
YCP4YCR004C CPA1P07258 411 aaKnown RBP8.31□□□□□ -1.08
YCP4YCR004C SLY1P22213 666 aa8.31□□□□□ -1.08
YCP4YCR004C RAD5P32849 1169 aaPredicted RBP8.31□□□□□ -1.08
YCP4YCR004C BLI1P35727 113 aa8.31□□□□□ -1.08
YCP4YCR004C DED81P38707 554 aaKnown RBP8.31□□□□□ -1.08
YCP4YCR004C FLC2P39719 783 aa8.31□□□□□ -1.08
YCP4YCR004C TES1P41903 349 aaKnown RBP8.31□□□□□ -1.08
YCP4YCR004C ALK1P43633 760 aaKnown RBP8.31□□□□□ -1.08
YCP4YCR004C PMT3P47190 753 aa8.31□□□□□ -1.08
YCP4YCR004C SAP4P53036 818 aa8.31□□□□□ -1.08
YCP4YCR004C COG1P53079 417 aa8.31□□□□□ -1.08
YCP4YCR004C NGL3Q03210 505 aa8.31□□□□□ -1.08
YCP4YCR004C FRT1Q99332 602 aa8.31□□□□□ -1.08
YCP4YCR004C PDC5P16467 563 aaKnown RBP8.3□□□□□ -1.08
YCP4YCR004C PET309P32522 965 aaPredicted RBP8.3□□□□□ -1.08
YCP4YCR004C SPT16P32558 1035 aaKnown RBP8.3□□□□□ -1.08
YCP4YCR004C CYM1P32898 989 aa8.3□□□□□ -1.08
YCP4YCR004C MIC60P36112 540 aa8.3□□□□□ -1.08
YCP4YCR004C GMH1P36125 273 aa8.3□□□□□ -1.08
YCP4YCR004C PCL5P38794 229 aa8.3□□□□□ -1.08
YCP4YCR004C SLX8P40072 274 aa8.3□□□□□ -1.08
YCP4YCR004C RGI2P40188 164 aa8.3□□□□□ -1.08
YCP4YCR004C SIW14P53965 281 aa8.3□□□□□ -1.08
YCP4YCR004C SSL2Q00578 843 aa8.3□□□□□ -1.08
YCP4YCR004C RCO1Q04779 684 aa8.3□□□□□ -1.08
YCP4YCR004C MCP2Q06567 569 aa8.3□□□□□ -1.08
YCP4YCR004C FRE7Q12333 620 aa8.3□□□□□ -1.08
YCP4YCR004C GPR1Q12361 961 aa8.3□□□□□ -1.08
YCP4YCR004C YBR056W-AI2HB52 66 aa8.29□□□□□ -1.08
YCP4YCR004C TUB3P09734 445 aaKnown RBP8.29□□□□□ -1.08
YCP4YCR004C PMS1P14242 873 aa8.29□□□□□ -1.08
YCP4YCR004C ACO1P19414 778 aaKnown RBP RIP-Chip data8.29□□□□□ -1.08not detected
YCP4YCR004C CLN1P20437 546 aa8.29□□□□□ -1.08
YCP4YCR004C YSP3P25036 478 aa8.29□□□□□ -1.08
YCP4YCR004C TAF14P35189 244 aa8.29□□□□□ -1.08
YCP4YCR004C EMC3P36039 253 aa8.29□□□□□ -1.08
YCP4YCR004C ECM2P38241 364 aaKnown RBP8.29□□□□□ -1.08
YCP4YCR004C RRT2P38332 387 aa8.29□□□□□ -1.08
YCP4YCR004C DIA4P38705 446 aaPredicted RBP8.29□□□□□ -1.08
YCP4YCR004C SAW1P39735 261 aa8.29□□□□□ -1.08
YCP4YCR004C RPL34BP40525 121 aaKnown RBP8.29□□□□□ -1.08
YCP4YCR004C IRR1P40541 1150 aa8.29□□□□□ -1.08
YCP4YCR004C SSU1P41930 458 aa8.29□□□□□ -1.08
YCP4YCR004C TY4A-JP47023 414 aa8.29□□□□□ -1.08
YCP4YCR004C HST3P53687 447 aa8.29□□□□□ -1.08
YCP4YCR004C FRE4P53746 719 aa8.29□□□□□ -1.08
YCP4YCR004C NPL3Q01560 414 aaKnown RBP RIP-Chip data8.29□□□□□ -1.08not detected
YCP4YCR004C RLI1Q03195 608 aaKnown RBP8.29□□□□□ -1.08
YCP4YCR004C ARP9Q05123 467 aa8.29□□□□□ -1.08
YCP4YCR004C YLR001CQ07895 862 aa8.29□□□□□ -1.08
YCP4YCR004C NRT1Q08485 598 aa8.29□□□□□ -1.08
YCP4YCR004C SMF3Q12078 473 aaPredicted RBP8.29□□□□□ -1.08
YCP4YCR004C ATG9Q12142 997 aa8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms