RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W VPS38Q05919 439 aa5.07□□□□□ -1.6
SIF2YBR103W MCM21Q06675 368 aa5.07□□□□□ -1.6
SIF2YBR103W YDL057WQ07379 328 aa5.07□□□□□ -1.6
SIF2YBR103W NOP6Q07623 225 aaKnown RBP5.07□□□□□ -1.6
SIF2YBR103W GPN2Q08726 347 aaPredicted RBP5.07□□□□□ -1.6
SIF2YBR103W YOR352WQ08816 343 aa5.07□□□□□ -1.6
SIF2YBR103W YPL277CQ08989 487 aa5.07□□□□□ -1.6
SIF2YBR103W PCD1Q12524 340 aa5.07□□□□□ -1.6
SIF2YBR103W RPB2P08518 1224 aaKnown RBP5.06□□□□□ -1.6
SIF2YBR103W GPA1P08539 472 aa5.06□□□□□ -1.6
SIF2YBR103W CMP2P14747 604 aa5.06□□□□□ -1.6
SIF2YBR103W MSS116P15424 664 aaKnown RBP5.06□□□□□ -1.6
SIF2YBR103W SFL1P20134 766 aa5.06□□□□□ -1.6
SIF2YBR103W AEP2P22136 580 aa5.06□□□□□ -1.6
SIF2YBR103W PCL2P25693 308 aa5.06□□□□□ -1.6
SIF2YBR103W STE13P33894 931 aa5.06□□□□□ -1.6
SIF2YBR103W HCS1P34243 683 aa5.06□□□□□ -1.6
SIF2YBR103W UTP11P34247 250 aaPredicted RBP5.06□□□□□ -1.6
SIF2YBR103W DRE2P36152 348 aa5.06□□□□□ -1.6
SIF2YBR103W MRX3P38172 270 aa5.06□□□□□ -1.6
SIF2YBR103W HEK2P38199 381 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
SIF2YBR103W YHL026CP38740 315 aa5.06□□□□□ -1.6
SIF2YBR103W RIM4P38741 713 aa5.06□□□□□ -1.6
SIF2YBR103W SMC2P38989 1170 aaKnown RBP5.06□□□□□ -1.6
SIF2YBR103W HXT6P39003 570 aaKnown RBP5.06□□□□□ -1.6
SIF2YBR103W HXT7P39004 570 aa5.06□□□□□ -1.6
SIF2YBR103W YJR096WP47137 282 aa5.06□□□□□ -1.6
SIF2YBR103W RNR4P49723 345 aaKnown RBP5.06□□□□□ -1.6
SIF2YBR103W MNP1P53163 194 aaPredicted RBP5.06□□□□□ -1.6
SIF2YBR103W EFM5P53200 248 aaKnown RBP5.06□□□□□ -1.6
SIF2YBR103W YNL134CP53912 376 aaKnown RBP5.06□□□□□ -1.6
SIF2YBR103W SRP1Q02821 542 aaKnown RBP5.06□□□□□ -1.6
SIF2YBR103W HAS1Q03532 505 aaKnown RBP5.06□□□□□ -1.6
SIF2YBR103W RSM24Q03976 319 aa5.06□□□□□ -1.6
SIF2YBR103W DOT1Q04089 582 aaKnown RBP5.06□□□□□ -1.6
SIF2YBR103W DYN3Q04949 312 aa5.06□□□□□ -1.6
SIF2YBR103W ENT2Q05785 613 aa5.06□□□□□ -1.6
SIF2YBR103W YTM1Q12024 460 aaPredicted RBP5.06□□□□□ -1.6
SIF2YBR103W OSW2Q12202 724 aa5.06□□□□□ -1.6
SIF2YBR103W BBP1Q12365 385 aa5.06□□□□□ -1.6
SIF2YBR103W GLN3P18494 730 aa5.05□□□□□ -1.6
SIF2YBR103W PRP4P20053 465 aaKnown RBP5.05□□□□□ -1.6
SIF2YBR103W KIN3P22209 435 aa5.05□□□□□ -1.6
SIF2YBR103W DPB2P24482 689 aaPredicted RBP5.05□□□□□ -1.6
SIF2YBR103W HSP30P25619 332 aa5.05□□□□□ -1.6
SIF2YBR103W GSY2P27472 705 aa5.05□□□□□ -1.6
SIF2YBR103W PTP2P29461 750 aa5.05□□□□□ -1.6
SIF2YBR103W NAM7P30771 971 aaKnown RBP5.05□□□□□ -1.6
SIF2YBR103W SIN4P32259 974 aa5.05□□□□□ -1.6
SIF2YBR103W SSE1P32589 693 aaKnown RBP5.05□□□□□ -1.6
SIF2YBR103W MRE11P32829 692 aa5.05□□□□□ -1.6
SIF2YBR103W NIC96P34077 839 aa5.05□□□□□ -1.6
SIF2YBR103W RSM22P36056 628 aa5.05□□□□□ -1.6
SIF2YBR103W VPS51P36116 164 aa5.05□□□□□ -1.6
SIF2YBR103W JNM1P36224 373 aa5.05□□□□□ -1.6
SIF2YBR103W MUM2P38236 366 aa5.05□□□□□ -1.6
SIF2YBR103W STB5P38699 743 aa5.05□□□□□ -1.6
SIF2YBR103W VMA22P38784 181 aa5.05□□□□□ -1.6
SIF2YBR103W YHR218WP38899 603 aa5.05□□□□□ -1.6
SIF2YBR103W CKB2P38930 258 aa5.05□□□□□ -1.6
SIF2YBR103W OPT1P40897 799 aa5.05□□□□□ -1.6
SIF2YBR103W DUG1P43616 481 aaKnown RBP5.05□□□□□ -1.6
SIF2YBR103W TMA22P47089 198 aaPredicted RBP5.05□□□□□ -1.6
SIF2YBR103W TEL2P53038 688 aa5.05□□□□□ -1.6
SIF2YBR103W KAP114P53067 1004 aa5.05□□□□□ -1.6
SIF2YBR103W CUL3P53202 744 aa5.05□□□□□ -1.6
SIF2YBR103W TAM41P53230 385 aa5.05□□□□□ -1.6
SIF2YBR103W YLR287CQ05881 355 aa5.05□□□□□ -1.6
SIF2YBR103W MDM36Q06820 579 aa5.05□□□□□ -1.6
SIF2YBR103W TCO89Q08921 799 aa5.05□□□□□ -1.6
SIF2YBR103W UIP4Q08926 304 aa5.05□□□□□ -1.6
SIF2YBR103W TAF10Q12030 206 aa5.05□□□□□ -1.6
SIF2YBR103W TAF3Q12297 353 aa5.05□□□□□ -1.6
SIF2YBR103W YDR034W-BQ6Q5X2 51 aa5.05□□□□□ -1.6
SIF2YBR103W COX4P04037 155 aa5.05□□□□□ -1.6
SIF2YBR103W THR1P17423 357 aaKnown RBP5.05□□□□□ -1.6
SIF2YBR103W MSB1P21339 1137 aaKnown RBP5.05□□□□□ -1.6
SIF2YBR103W REC107P21651 314 aa5.05□□□□□ -1.6
SIF2YBR103W UBA1P22515 1024 aaKnown RBP5.05□□□□□ -1.6
SIF2YBR103W CNA1P23287 553 aa5.05□□□□□ -1.6
SIF2YBR103W APL1P27351 700 aa5.05□□□□□ -1.6
SIF2YBR103W SKG6P32900 734 aaPredicted RBP5.05□□□□□ -1.6
SIF2YBR103W SLA2P33338 968 aa5.05□□□□□ -1.6
SIF2YBR103W YKT6P36015 200 aaKnown RBP5.05□□□□□ -1.6
SIF2YBR103W YKR015CP36111 568 aa5.05□□□□□ -1.6
SIF2YBR103W APD1P38281 316 aa5.05□□□□□ -1.6
SIF2YBR103W HSE1P38753 452 aa5.05□□□□□ -1.6
SIF2YBR103W YAR028WP39548 234 aa5.05□□□□□ -1.6
SIF2YBR103W FAF1P40546 346 aaPredicted RBP5.05□□□□□ -1.6
SIF2YBR103W SNL1P40548 159 aa5.05□□□□□ -1.6
SIF2YBR103W AXL1P40851 1208 aa5.05□□□□□ -1.6
SIF2YBR103W APS3P47064 194 aa5.05□□□□□ -1.6
SIF2YBR103W GCV1P48015 400 aa5.05□□□□□ -1.6
SIF2YBR103W YPT11P48559 417 aa5.05□□□□□ -1.6
SIF2YBR103W YNL058CP53947 316 aa5.05□□□□□ -1.6
SIF2YBR103W YLR455WQ06188 304 aa5.05□□□□□ -1.6
SIF2YBR103W ARR2Q06597 130 aa5.05□□□□□ -1.6
SIF2YBR103W VAC14Q06708 880 aa5.05□□□□□ -1.6
SIF2YBR103W OPY2Q06810 360 aa5.05□□□□□ -1.6
SIF2YBR103W TMA16Q08687 178 aa5.05□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms