RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C RBA50Q04418 439 aa2.42□□□□□ -2.02
CLN3YAL040C CIA1Q05583 330 aa2.42□□□□□ -2.02
CLN3YAL040C COQ9Q05779 260 aa2.42□□□□□ -2.02
CLN3YAL040C YCG1Q06680 1035 aa2.42□□□□□ -2.02
CLN3YAL040C ACF2Q12168 779 aa2.42□□□□□ -2.02
CLN3YAL040C ERG11P10614 530 aa2.41□□□□□ -2.02
CLN3YAL040C RPL4AP10664 362 aaKnown RBP2.41□□□□□ -2.02
CLN3YAL040C PCK1P10963 549 aa2.41□□□□□ -2.02
CLN3YAL040C TCP1P12612 559 aaKnown RBP2.41□□□□□ -2.02
CLN3YAL040C HMG1P12683 1054 aa2.41□□□□□ -2.02
CLN3YAL040C COX11P19516 300 aaKnown RBP2.41□□□□□ -2.02
CLN3YAL040C KRR1P25586 316 aaPredicted RBP2.41□□□□□ -2.02
CLN3YAL040C AAR2P32357 355 aaPredicted RBP2.41□□□□□ -2.02
CLN3YAL040C DAL3P32459 195 aa2.41□□□□□ -2.02
CLN3YAL040C STE14P32584 239 aa2.41□□□□□ -2.02
CLN3YAL040C MUD1P32605 298 aaKnown RBP2.41□□□□□ -2.02
CLN3YAL040C BEM3P32873 1128 aa2.41□□□□□ -2.02
CLN3YAL040C AFR1P33304 620 aa2.41□□□□□ -2.02
CLN3YAL040C EMC3P36039 253 aa2.41□□□□□ -2.02
CLN3YAL040C TVP38P36164 337 aa2.41□□□□□ -2.02
CLN3YAL040C APE3P37302 537 aaKnown RBP2.41□□□□□ -2.02
CLN3YAL040C YBR238CP38330 731 aaKnown RBP2.41□□□□□ -2.02
CLN3YAL040C EFM2P38347 419 aa2.41□□□□□ -2.02
CLN3YAL040C KSP1P38691 1029 aaKnown RBP2.41□□□□□ -2.02
CLN3YAL040C SMF1P38925 575 aa2.41□□□□□ -2.02
CLN3YAL040C CAJ1P39101 391 aa2.41□□□□□ -2.02
CLN3YAL040C NOP16P40007 231 aaKnown RBP2.41□□□□□ -2.02
CLN3YAL040C ERR3P42222 437 aa2.41□□□□□ -2.02
CLN3YAL040C QRI1P43123 477 aaKnown RBP2.41□□□□□ -2.02
CLN3YAL040C GYP8P43570 497 aa2.41□□□□□ -2.02
CLN3YAL040C RPL4BP49626 362 aaKnown RBP2.41□□□□□ -2.02
CLN3YAL040C RTT102P53330 157 aa2.41□□□□□ -2.02
CLN3YAL040C YGR283CP53336 341 aaPredicted RBP2.41□□□□□ -2.02
CLN3YAL040C TIM8P57744 87 aa2.41□□□□□ -2.02
CLN3YAL040C SEC5P89102 971 aa2.41□□□□□ -2.02
CLN3YAL040C ECM9Q02202 377 aa2.41□□□□□ -2.02
CLN3YAL040C VTC3Q02725 835 aa2.41□□□□□ -2.02
CLN3YAL040C SKY1Q03656 742 aa2.41□□□□□ -2.02
CLN3YAL040C HLR1Q04429 423 aa2.41□□□□□ -2.02
CLN3YAL040C TMN2Q04562 672 aa2.41□□□□□ -2.02
CLN3YAL040C BLS1Q06071 122 aa2.41□□□□□ -2.02
CLN3YAL040C ATG33Q06485 197 aa2.41□□□□□ -2.02
CLN3YAL040C RSC3Q06639 885 aa2.41□□□□□ -2.02
CLN3YAL040C CSR1Q06705 408 aaKnown RBP2.41□□□□□ -2.02
CLN3YAL040C VHS3Q08438 674 aa2.41□□□□□ -2.02
CLN3YAL040C IES4Q08561 116 aa2.41□□□□□ -2.02
CLN3YAL040C SFI1Q12369 946 aa2.41□□□□□ -2.02
CLN3YAL040C TRM11Q12463 433 aa2.41□□□□□ -2.02
CLN3YAL040C TY1B-AO13527 1196 aaKnown RBP2.4□□□□□ -2.02
CLN3YAL040C MAS2P11914 482 aa2.4□□□□□ -2.02
CLN3YAL040C POX1P13711 748 aa2.4□□□□□ -2.02
CLN3YAL040C GFA1P14742 717 aaKnown RBP2.4□□□□□ -2.02
CLN3YAL040C PAH1P32567 862 aa2.4□□□□□ -2.02
CLN3YAL040C VMA8P32610 256 aaKnown RBP2.4□□□□□ -2.02
CLN3YAL040C YKR018CP36114 725 aa2.4□□□□□ -2.02
CLN3YAL040C UBP13P38187 747 aa2.4□□□□□ -2.02
CLN3YAL040C TSL1P38427 1098 aaKnown RBP2.4□□□□□ -2.02
CLN3YAL040C TCD1P38756 429 aa2.4□□□□□ -2.02
CLN3YAL040C SAP1P39955 897 aaKnown RBP2.4□□□□□ -2.02
CLN3YAL040C EAF5P39995 279 aa2.4□□□□□ -2.02
CLN3YAL040C DOT6P40059 670 aaKnown RBP2.4□□□□□ -2.02
CLN3YAL040C ATF1P40353 525 aa2.4□□□□□ -2.02
CLN3YAL040C ZAP1P47043 880 aa2.4□□□□□ -2.02
CLN3YAL040C UPF3P48412 387 aaKnown RBP2.4□□□□□ -2.02
CLN3YAL040C ASN1P49089 572 aaKnown RBP2.4□□□□□ -2.02
CLN3YAL040C HSH155P49955 971 aaKnown RBP2.4□□□□□ -2.02
CLN3YAL040C VID30P53076 958 aa2.4□□□□□ -2.02
CLN3YAL040C YGR016WP53209 190 aa2.4□□□□□ -2.02
CLN3YAL040C DAM1P53267 343 aa2.4□□□□□ -2.02
CLN3YAL040C BRE5P53741 515 aaKnown RBP2.4□□□□□ -2.02
CLN3YAL040C YNL146WP53906 100 aa2.4□□□□□ -2.02
CLN3YAL040C PRP3Q03338 469 aaPredicted RBP2.4□□□□□ -2.02
CLN3YAL040C SML1Q04964 104 aa2.4□□□□□ -2.02
CLN3YAL040C YLR297WQ05899 129 aa2.4□□□□□ -2.02
CLN3YAL040C VAC14Q06708 880 aa2.4□□□□□ -2.02
CLN3YAL040C YPR078CQ06813 372 aa2.4□□□□□ -2.02
CLN3YAL040C IRC10Q08118 586 aa2.4□□□□□ -2.02
CLN3YAL040C SMC5Q08204 1093 aa2.4□□□□□ -2.02
CLN3YAL040C YOL114CQ12322 202 aa2.4□□□□□ -2.02
CLN3YAL040C YPR071WQ12346 211 aa2.4□□□□□ -2.02
CLN3YAL040C ZPS1Q12512 249 aa2.4□□□□□ -2.02
CLN3YAL040C COX4P04037 155 aa2.39□□□□□ -2.03
CLN3YAL040C ADE4P04046 510 aaKnown RBP2.39□□□□□ -2.03
CLN3YAL040C HOP1P20050 605 aa2.39□□□□□ -2.03
CLN3YAL040C DAL2P25335 343 aa2.39□□□□□ -2.03
CLN3YAL040C BRF1P29056 596 aa2.39□□□□□ -2.03
CLN3YAL040C RAD16P31244 790 aa2.39□□□□□ -2.03
CLN3YAL040C SPC110P32380 944 aa2.39□□□□□ -2.03
CLN3YAL040C HXT1P32465 570 aa2.39□□□□□ -2.03
CLN3YAL040C VPH1P32563 840 aaKnown RBP2.39□□□□□ -2.03
CLN3YAL040C COT1P32798 439 aa2.39□□□□□ -2.03
CLN3YAL040C PEX2P32800 271 aa2.39□□□□□ -2.03
CLN3YAL040C NPL6P32832 435 aa2.39□□□□□ -2.03
CLN3YAL040C BCS1P32839 456 aa2.39□□□□□ -2.03
CLN3YAL040C PXA2P34230 853 aa2.39□□□□□ -2.03
CLN3YAL040C YKL100CP34248 587 aa2.39□□□□□ -2.03
CLN3YAL040C MRX3P38172 270 aa2.39□□□□□ -2.03
CLN3YAL040C VID24P38263 362 aa2.39□□□□□ -2.03
CLN3YAL040C AFG3P39925 761 aa2.39□□□□□ -2.03
CLN3YAL040C YEL025CP39991 1188 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 81.1 ms