RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 EIF6P56537 245 aaKnown RBP17.67■□□□□ 0.42
SCN8A-214ENST00000637709 PNOCQ13519 176 aa17.67■□□□□ 0.42
SCN8A-214ENST00000637709 TMTC3Q6ZXV5 915 aa17.67■□□□□ 0.42
SCN8A-214ENST00000637709 ANO8Q9HCE9 1232 aaPredicted RBP17.67■□□□□ 0.42
SCN8A-214ENST00000637709 NID2Q14112 1375 aa17.67■□□□□ 0.42
SCN8A-214ENST00000637709 DLEC1Q9Y238 1755 aa17.67■□□□□ 0.42
SCN8A-214ENST00000637709 FLT1P17948 1338 aa17.67■□□□□ 0.42
SCN8A-214ENST00000637709 SBK1Q52WX2 424 aa17.67■□□□□ 0.42
SCN8A-214ENST00000637709 GRAMD1CQ8IYS0 662 aa17.67■□□□□ 0.42
SCN8A-214ENST00000637709 PNMA1Q8ND90 353 aa17.67■□□□□ 0.42
SCN8A-214ENST00000637709 NAP1L5Q96NT1 182 aaPredicted RBP17.67■□□□□ 0.42
SCN8A-214ENST00000637709 CRAMP1Q96RY5 1269 aa17.67■□□□□ 0.42
SCN8A-214ENST00000637709 RNF26Q9BY78 433 aaPredicted RBP17.67■□□□□ 0.42
SCN8A-214ENST00000637709 KAT14Q9H8E8 782 aa17.67■□□□□ 0.42
SCN8A-214ENST00000637709 GSTO1P78417 241 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 LONRF3Q496Y0 759 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 AOPEPQ8N6M6 819 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 RASGRP4Q8TDF6 673 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 ATP6V0A2Q9Y487 856 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 PARP3Q9Y6F1 533 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 MYH1P12882 1939 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 CMA1P23946 247 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 CACNB3P54284 484 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 RHBDL3P58872 404 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 STX1AQ16623 288 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 DPP8Q6V1X1 898 aaPredicted RBP17.66■□□□□ 0.42
SCN8A-214ENST00000637709 DRC7Q8IY82 874 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 NLGN1Q8N2Q7 840 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 ZC3H12CQ9C0D7 883 aaKnown RBP17.66■□□□□ 0.42
SCN8A-214ENST00000637709 DAGLAQ9Y4D2 1042 aa17.66■□□□□ 0.42
SCN8A-214ENST00000637709 EN1Q05925 392 aaPredicted RBP17.65■□□□□ 0.42
SCN8A-214ENST00000637709 IQCB1Q15051 598 aa17.65■□□□□ 0.42
SCN8A-214ENST00000637709 DHX40Q8IX18 779 aaKnown RBP17.65■□□□□ 0.42
SCN8A-214ENST00000637709 ZNF444Q8N0Y2 327 aaPredicted RBP17.65■□□□□ 0.42
SCN8A-214ENST00000637709 PODXL2Q9NZ53 605 aa17.65■□□□□ 0.42
SCN8A-214ENST00000637709 TTF2Q9UNY4 1162 aaKnown RBP17.65■□□□□ 0.42
SCN8A-214ENST00000637709 RASA1P20936 1047 aa17.65■□□□□ 0.42
SCN8A-214ENST00000637709 ZNF174Q15697 407 aa17.65■□□□□ 0.42
SCN8A-214ENST00000637709 SLC35G1Q2M3R5 365 aa17.65■□□□□ 0.42
SCN8A-214ENST00000637709 SP8Q8IXZ3 490 aa17.65■□□□□ 0.42
SCN8A-214ENST00000637709 KIAA1468Q9P260 1216 aa17.65■□□□□ 0.42
SCN8A-214ENST00000637709 DDX60LQ5H9U9 1706 aaKnown RBP17.65■□□□□ 0.42
SCN8A-214ENST00000637709 KLRG2A4D1S0 409 aaPredicted RBP17.64■□□□□ 0.42
SCN8A-214ENST00000637709 G3V3G9 751 aa17.64■□□□□ 0.42
SCN8A-214ENST00000637709 EZH2Q15910 746 aaKnown RBP17.64■□□□□ 0.42
SCN8A-214ENST00000637709 DCAF8Q5TAQ9 597 aa17.64■□□□□ 0.42
SCN8A-214ENST00000637709 PHF20Q9BVI0 1012 aa17.64■□□□□ 0.42
SCN8A-214ENST00000637709 DDX4Q9NQI0 724 aaKnown RBP17.64■□□□□ 0.42
SCN8A-214ENST00000637709 LTBP1Q14766 1721 aa17.64■□□□□ 0.41
SCN8A-214ENST00000637709 GPR75-ASB3A0A0A6YYF3 556 aa17.64■□□□□ 0.41
SCN8A-214ENST00000637709 PRPF3O43395 683 aaKnown RBP17.64■□□□□ 0.41
SCN8A-214ENST00000637709 PTGS1P23219 599 aa17.64■□□□□ 0.41
SCN8A-214ENST00000637709 RXRBP28702 533 aa17.64■□□□□ 0.41
SCN8A-214ENST00000637709 CDK8P49336 464 aa17.64■□□□□ 0.41
SCN8A-214ENST00000637709 NPY5RQ15761 445 aa17.64■□□□□ 0.41
SCN8A-214ENST00000637709 ZNF772Q68DY9 489 aaPredicted RBP17.64■□□□□ 0.41
SCN8A-214ENST00000637709 MTA3Q9BTC8 594 aa17.64■□□□□ 0.41
SCN8A-214ENST00000637709 FOXP1Q9H334 677 aaPredicted RBP17.64■□□□□ 0.41
SCN8A-214ENST00000637709 KCNF1Q9H3M0 494 aa17.64■□□□□ 0.41
SCN8A-214ENST00000637709 BECN2A8MW95 431 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 GOLGA6L19H0YKK7 550 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 DDAH1O94760 285 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 LDHCP07864 332 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 KRT2P35908 639 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 PPP4CP60510 307 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 PTPN21Q16825 1174 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 HSP90AA4PQ58FG1 418 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 TYW1BQ6NUM6 668 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 PIK3AP1Q6ZUJ8 805 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 C15orf52Q6ZUT6 534 aaKnown RBP17.63■□□□□ 0.41
SCN8A-214ENST00000637709 AMOTL1Q8IY63 956 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 EYA3Q99504 573 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 PLSCR1O15162 318 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 CTAGE5O15320 804 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 PPP6R2O75170 966 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 RESP18Q5W5W9 173 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 KRI1Q8N9T8 703 aaKnown RBP17.63■□□□□ 0.41
SCN8A-214ENST00000637709 TMEM47Q9BQJ4 181 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 VAT1LQ9HCJ6 419 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 KCNH3Q9ULD8 1083 aa17.63■□□□□ 0.41
SCN8A-214ENST00000637709 FAM196BA6NMK8 535 aa17.62■□□□□ 0.41
SCN8A-214ENST00000637709 POLR2DO15514 142 aaKnown RBP17.62■□□□□ 0.41
SCN8A-214ENST00000637709 CASP1P29466 404 aa17.62■□□□□ 0.41
SCN8A-214ENST00000637709 NLRP5P59047 1200 aa17.62■□□□□ 0.41
SCN8A-214ENST00000637709 LRMPQ12912 555 aa17.62■□□□□ 0.41
SCN8A-214ENST00000637709 HS1BP3Q53T59 392 aa17.62■□□□□ 0.41
SCN8A-214ENST00000637709 USP17L2Q6R6M4 530 aa17.62■□□□□ 0.41
SCN8A-214ENST00000637709 HOMER1Q86YM7 354 aa17.62■□□□□ 0.41
SCN8A-214ENST00000637709 KIAA0825Q8IV33 1275 aa17.62■□□□□ 0.41
SCN8A-214ENST00000637709 RBM28Q9NW13 759 aaKnown RBP17.62■□□□□ 0.41
SCN8A-214ENST00000637709 FBXO2Q9UK22 296 aaPredicted RBP17.62■□□□□ 0.41
SCN8A-214ENST00000637709 CYTH3O43739 400 aa17.62■□□□□ 0.41
SCN8A-214ENST00000637709 PCP11498 1178 aaKnown RBP17.62■□□□□ 0.41
SCN8A-214ENST00000637709 NPR1P16066 1061 aa17.62■□□□□ 0.41
SCN8A-214ENST00000637709 ZRSR1Q15695 479 aaKnown RBP17.62■□□□□ 0.41
SCN8A-214ENST00000637709 METTL16Q86W50 562 aaKnown RBP17.62■□□□□ 0.41
SCN8A-214ENST00000637709 C2CD5Q86YS7 1000 aa17.62■□□□□ 0.41
SCN8A-214ENST00000637709 FOXP4Q8IVH2 680 aaPredicted RBP17.62■□□□□ 0.41
SCN8A-214ENST00000637709 EPSTI1Q96J88 318 aa17.62■□□□□ 0.41
SCN8A-214ENST00000637709 CSRNP2Q9H175 543 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms