RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 IREB2P48200 963 aaKnown RBP13.5□□□□□ -0.25
SLIRP-212ENST00000613856 VGLL4Q14135 290 aa13.5□□□□□ -0.25
SLIRP-212ENST00000613856 CCL15Q16663 113 aa13.5□□□□□ -0.25
SLIRP-212ENST00000613856 SPDYE2Q495Y8 402 aa13.5□□□□□ -0.25
SLIRP-212ENST00000613856 C12orf60Q5U649 245 aa13.5□□□□□ -0.25
SLIRP-212ENST00000613856 FKBP1CQ5VVH2 108 aa13.5□□□□□ -0.25
SLIRP-212ENST00000613856 RALYLQ86SE5 291 aaKnown RBP13.5□□□□□ -0.25
SLIRP-212ENST00000613856 HSCBQ8IWL3 235 aa13.5□□□□□ -0.25
SLIRP-212ENST00000613856 MB21D2Q8IYB1 491 aaPredicted RBP13.5□□□□□ -0.25
SLIRP-212ENST00000613856 IPO9Q96P70 1041 aaKnown RBP13.5□□□□□ -0.25
SLIRP-212ENST00000613856 TBC1D2Q9BYX2 928 aa13.5□□□□□ -0.25
SLIRP-212ENST00000613856 OSBPL5Q9H0X9 879 aaPredicted RBP13.5□□□□□ -0.25
SLIRP-212ENST00000613856 TDRD3Q9H7E2 651 aaKnown RBP13.5□□□□□ -0.25
SLIRP-212ENST00000613856 DDX4Q9NQI0 724 aaKnown RBP13.5□□□□□ -0.25
SLIRP-212ENST00000613856 TAOK2Q9UL54 1235 aa13.5□□□□□ -0.25
SLIRP-212ENST00000613856 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
SLIRP-212ENST00000613856 PPP2R3BQ9Y5P8 575 aa13.5□□□□□ -0.25
SLIRP-212ENST00000613856 ATRNL1Q5VV63 1379 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 NEDD4P46934 1319 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 MINDY4BA8MYZ0 360 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 ORC4O43929 436 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 ENTPD3O75355 529 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 CD2BP2O95400 341 aaKnown RBP13.49□□□□□ -0.25
SLIRP-212ENST00000613856 SLC3A2P08195 630 aaKnown RBP13.49□□□□□ -0.25
SLIRP-212ENST00000613856 CTDSPL2Q05D32 466 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 TRDNQ13061 729 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 SUPT20HL1Q3ZLR7 823 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 MFSD6Q6ZSS7 791 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 DHX32Q7L7V1 743 aaKnown RBP13.49□□□□□ -0.25
SLIRP-212ENST00000613856 FBXL16Q8N461 479 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 KRT23Q9C075 422 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 TMEM39BQ9GZU3 492 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 PDRG1Q9NUG6 133 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 TMOD2Q9NZR1 351 aa13.49□□□□□ -0.25
SLIRP-212ENST00000613856 CYP2D7A0A087X1C5 515 aa13.48□□□□□ -0.25
SLIRP-212ENST00000613856 K7ELQ4 463 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-212ENST00000613856 DLL1O00548 723 aa13.48□□□□□ -0.25
SLIRP-212ENST00000613856 CYP2D6P10635 497 aa13.48□□□□□ -0.25
SLIRP-212ENST00000613856 EXOSC10Q01780 885 aaKnown RBP13.48□□□□□ -0.25
SLIRP-212ENST00000613856 NFIAQ12857 509 aa13.48□□□□□ -0.25
SLIRP-212ENST00000613856 OTUD7BQ6GQQ9 843 aa13.48□□□□□ -0.25
SLIRP-212ENST00000613856 MTA3Q9BTC8 594 aa13.48□□□□□ -0.25
SLIRP-212ENST00000613856 AGXT2Q9BYV1 514 aa13.48□□□□□ -0.25
SLIRP-212ENST00000613856 ZNF70Q9UC06 446 aaPredicted RBP13.48□□□□□ -0.25
SLIRP-212ENST00000613856 FAM198AQ9UFP1 575 aa13.48□□□□□ -0.25
SLIRP-212ENST00000613856 TACC3Q9Y6A5 838 aa13.48□□□□□ -0.25
SLIRP-212ENST00000613856 ALPK3Q96L96 1907 aa13.48□□□□□ -0.25
SLIRP-212ENST00000613856 GREB1LQ9C091 1923 aaPredicted RBP13.47□□□□□ -0.25
SLIRP-212ENST00000613856 TCP10L2B9ZVM9 353 aa13.47□□□□□ -0.25
SLIRP-212ENST00000613856 SOX1O00570 391 aaPredicted RBP13.47□□□□□ -0.25
SLIRP-212ENST00000613856 MYO1BO43795 1136 aa13.47□□□□□ -0.25
SLIRP-212ENST00000613856 POLR3DP05423 398 aaPredicted RBP13.47□□□□□ -0.25
SLIRP-212ENST00000613856 CPA1P15085 419 aa13.47□□□□□ -0.25
SLIRP-212ENST00000613856 MCM5P33992 734 aa13.47□□□□□ -0.25
SLIRP-212ENST00000613856 CACNB3P54284 484 aa13.47□□□□□ -0.25
SLIRP-212ENST00000613856 AK2P54819 239 aa13.47□□□□□ -0.25
SLIRP-212ENST00000613856 PDE4BQ07343 736 aa13.47□□□□□ -0.25
SLIRP-212ENST00000613856 PICALMQ13492 652 aa13.47□□□□□ -0.25
SLIRP-212ENST00000613856 COL9A3Q14050 684 aaPredicted RBP13.47□□□□□ -0.25
SLIRP-212ENST00000613856 ANKRD1Q15327 319 aa13.47□□□□□ -0.25
SLIRP-212ENST00000613856 TTC6Q86TZ1 520 aa13.47□□□□□ -0.25
SLIRP-212ENST00000613856 EHD4Q9H223 541 aa13.47□□□□□ -0.25
SLIRP-212ENST00000613856 DHX36Q9H2U1 1008 aaKnown RBP13.47□□□□□ -0.25
SLIRP-212ENST00000613856 PRO3102Q9H379 93 aa13.47□□□□□ -0.25
SLIRP-212ENST00000613856 SAP30BPQ9UHR5 308 aaKnown RBP13.47□□□□□ -0.25
SLIRP-212ENST00000613856 A0A0C4DFX4 3053 aa13.47□□□□□ -0.25
SLIRP-212ENST00000613856 HLA-DOAP06340 250 aa13.46□□□□□ -0.25
SLIRP-212ENST00000613856 ANTXR2P58335 489 aa13.46□□□□□ -0.25
SLIRP-212ENST00000613856 LACTBP83111 547 aaPredicted RBP13.46□□□□□ -0.25
SLIRP-212ENST00000613856 C16orf86Q6ZW13 317 aa13.46□□□□□ -0.25
SLIRP-212ENST00000613856 NBPF11Q86T75 865 aa13.46□□□□□ -0.25
SLIRP-212ENST00000613856 FAM83AQ86UY5 434 aa13.46□□□□□ -0.25
SLIRP-212ENST00000613856 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.46□□□□□ -0.251e-8■■■■■ 34
SLIRP-212ENST00000613856 ESR2Q92731 530 aa13.46□□□□□ -0.25
SLIRP-212ENST00000613856 ZNF287Q9HBT7 754 aa13.46□□□□□ -0.25
SLIRP-212ENST00000613856 ZFYVE28Q9HCC9 887 aa13.46□□□□□ -0.25
SLIRP-212ENST00000613856 SNCAIPQ9Y6H5 919 aa13.46□□□□□ -0.25
SLIRP-212ENST00000613856 MGAMO43451 1857 aa13.46□□□□□ -0.26
SLIRP-212ENST00000613856 UNCXA6NJT0 531 aa13.45□□□□□ -0.26
SLIRP-212ENST00000613856 B4E1Z4 1266 aa13.45□□□□□ -0.26
SLIRP-212ENST00000613856 BTBD19C9JJ37 291 aa13.45□□□□□ -0.26
SLIRP-212ENST00000613856 SMIM22K7EJ46 135 aa13.45□□□□□ -0.26
SLIRP-212ENST00000613856 PRC1O43663 620 aa13.45□□□□□ -0.26
SLIRP-212ENST00000613856 PLCD1P51178 756 aa13.45□□□□□ -0.26
SLIRP-212ENST00000613856 EVX2Q03828 476 aa13.45□□□□□ -0.26
SLIRP-212ENST00000613856 GABPAQ06546 454 aa13.45□□□□□ -0.26
SLIRP-212ENST00000613856 TOB2Q14106 344 aaPredicted RBP13.45□□□□□ -0.26
SLIRP-212ENST00000613856 FAM151AQ8WW52 585 aa13.45□□□□□ -0.26
SLIRP-212ENST00000613856 DPF3Q92784 378 aa13.45□□□□□ -0.26
SLIRP-212ENST00000613856 LRCH3Q96II8 777 aa13.45□□□□□ -0.26
SLIRP-212ENST00000613856 TMEM87BQ96K49 555 aa13.45□□□□□ -0.26
SLIRP-212ENST00000613856 SWAP70Q9UH65 585 aa13.45□□□□□ -0.26
SLIRP-212ENST00000613856 TLR2O60603 784 aa13.44□□□□□ -0.26
SLIRP-212ENST00000613856 KDM4AO75164 1064 aa13.44□□□□□ -0.26
SLIRP-212ENST00000613856 MAP3K9P80192 1104 aa13.44□□□□□ -0.26
SLIRP-212ENST00000613856 TNFAIP1Q13829 316 aa13.44□□□□□ -0.26
SLIRP-212ENST00000613856 Q6ZUG5 572 aa13.44□□□□□ -0.26
SLIRP-212ENST00000613856 CYB5R4Q7L1T6 521 aa13.44□□□□□ -0.26
SLIRP-212ENST00000613856 UBE2Q1Q7Z7E8 422 aa13.44□□□□□ -0.26
SLIRP-212ENST00000613856 METTL16Q86W50 562 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms