RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SLFN12Q8IYM2 578 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 BAHD1Q8TBE0 780 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 ARMC5Q96C12 935 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 SLC9A7Q96T83 725 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 MIPEPQ99797 713 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 TM9SF2Q99805 663 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 FAM83CQ9BQN1 747 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 HIRIP3Q9BW71 556 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 TNKS2Q9H2K2 1166 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 C1GALT1Q9NS00 363 aa8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 R3HCC1Q9Y3T6 440 aaKnown RBP8.64□□□□□ -1.03
SMARCE1-219ENST00000583294 ACRP10323 421 aa8.63□□□□□ -1.03
SMARCE1-219ENST00000583294 RBL2Q08999 1139 aa8.63□□□□□ -1.03
SMARCE1-219ENST00000583294 ZYXQ15942 572 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-219ENST00000583294 TTC6Q86TZ1 520 aa8.63□□□□□ -1.03
SMARCE1-219ENST00000583294 CCDC74BQ96LY2 380 aa8.63□□□□□ -1.03
SMARCE1-219ENST00000583294 GSC2O15499 205 aa8.62□□□□□ -1.03
SMARCE1-219ENST00000583294 GBP1P32455 592 aa8.62□□□□□ -1.03
SMARCE1-219ENST00000583294 CD97P48960 835 aa8.62□□□□□ -1.03
SMARCE1-219ENST00000583294 NFIAQ12857 509 aa8.62□□□□□ -1.03
SMARCE1-219ENST00000583294 TNNI3KQ59H18 835 aa8.62□□□□□ -1.03
SMARCE1-219ENST00000583294 UNC5AQ6ZN44 842 aa8.62□□□□□ -1.03
SMARCE1-219ENST00000583294 ZDHHC13Q8IUH4 622 aa8.62□□□□□ -1.03
SMARCE1-219ENST00000583294 TOP6BLQ8N6T0 577 aa8.62□□□□□ -1.03
SMARCE1-219ENST00000583294 MFSD2AQ8NA29 543 aa8.62□□□□□ -1.03
SMARCE1-219ENST00000583294 RIN3Q8TB24 985 aa8.62□□□□□ -1.03
SMARCE1-219ENST00000583294 ACTR10Q9NZ32 417 aa8.62□□□□□ -1.03
SMARCE1-219ENST00000583294 A0A1W2PQH9 124 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 TNFRSF10CO14798 259 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 RGS13O14921 159 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 LEFTY1O75610 366 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 SLITRK5O94991 958 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 ADMP35318 185 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 LARP1BQ659C4 914 aaKnown RBP8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 RNF43Q68DV7 783 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 CDH24Q86UP0 819 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 SHISA5Q8N114 240 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 FBXL6Q8N531 539 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 CYB5D2Q8WUJ1 264 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 TBC1D32Q96NH3 1257 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 KRTAP9-2Q9BYQ4 174 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 PRDM10Q9NQV6 1147 aa8.61□□□□□ -1.03
SMARCE1-219ENST00000583294 RBAK-RBAKDNI3L0D1 243 aa8.6□□□□□ -1.03
SMARCE1-219ENST00000583294 KLF4O43474 513 aa8.6□□□□□ -1.03
SMARCE1-219ENST00000583294 FAM87AP0C7U9 286 aa8.6□□□□□ -1.03
SMARCE1-219ENST00000583294 INTS3Q68E01 1043 aaKnown RBP8.6□□□□□ -1.03
SMARCE1-219ENST00000583294 LETMD1Q6P1Q0 360 aa8.6□□□□□ -1.03
SMARCE1-219ENST00000583294 MFSD14AQ96MC6 490 aa8.6□□□□□ -1.03
SMARCE1-219ENST00000583294 TRIM55Q9BYV6 548 aa8.6□□□□□ -1.03
SMARCE1-219ENST00000583294 ST7Q9NRC1 585 aa8.6□□□□□ -1.03
SMARCE1-219ENST00000583294 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1-219ENST00000583294 UBOX5O94941 541 aa8.59□□□□□ -1.03
SMARCE1-219ENST00000583294 CASP7P55210 303 aa8.59□□□□□ -1.03
SMARCE1-219ENST00000583294 TAB3Q8N5C8 712 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1-219ENST00000583294 C19orf47Q8N9M1 422 aaKnown RBP8.59□□□□□ -1.03
SMARCE1-219ENST00000583294 PPP1R13LQ8WUF5 828 aa8.59□□□□□ -1.03
SMARCE1-219ENST00000583294 DUSP23Q9BVJ7 150 aa8.59□□□□□ -1.03
SMARCE1-219ENST00000583294 LNPKQ9C0E8 428 aa8.59□□□□□ -1.03
SMARCE1-219ENST00000583294 PCDHB10Q9UN67 800 aa8.59□□□□□ -1.03
SMARCE1-219ENST00000583294 LTBP3Q9NS15 1303 aa8.58□□□□□ -1.04
SMARCE1-219ENST00000583294 COBLO75128 1261 aa8.58□□□□□ -1.04
SMARCE1-219ENST00000583294 CHMP4BP1P59074 171 aa8.58□□□□□ -1.04
SMARCE1-219ENST00000583294 RAB33AQ14088 237 aa8.58□□□□□ -1.04
SMARCE1-219ENST00000583294 DPH6Q7L8W6 267 aa8.58□□□□□ -1.04
SMARCE1-219ENST00000583294 TMEM192Q8IY95 271 aa8.58□□□□□ -1.04
SMARCE1-219ENST00000583294 CELF2-AS1Q8N7Q2 184 aa8.58□□□□□ -1.04
SMARCE1-219ENST00000583294 GIMAP7Q8NHV1 300 aa8.58□□□□□ -1.04
SMARCE1-219ENST00000583294 SLC6A18Q96N87 628 aa8.58□□□□□ -1.04
SMARCE1-219ENST00000583294 FAM86C1Q9NVL1 165 aa8.58□□□□□ -1.04
SMARCE1-219ENST00000583294 CEP131Q9UPN4 1083 aa8.58□□□□□ -1.04
SMARCE1-219ENST00000583294 PRR19A6NJB7 356 aa8.57□□□□□ -1.04
SMARCE1-219ENST00000583294 U2SURPO15042 1029 aaKnown RBP8.57□□□□□ -1.04
SMARCE1-219ENST00000583294 SOGA3Q5TF21 947 aa8.57□□□□□ -1.04
SMARCE1-219ENST00000583294 ZAR1Q86SH2 424 aa8.57□□□□□ -1.04
SMARCE1-219ENST00000583294 DNAJB8Q8NHS0 232 aa8.57□□□□□ -1.04
SMARCE1-219ENST00000583294 MICAL1Q8TDZ2 1067 aa8.57□□□□□ -1.04
SMARCE1-219ENST00000583294 GATA6Q92908 595 aa8.57□□□□□ -1.04
SMARCE1-219ENST00000583294 DBNDD2Q9BQY9 259 aa8.57□□□□□ -1.04
SMARCE1-219ENST00000583294 TPX2Q9ULW0 747 aaKnown RBP8.57□□□□□ -1.04
SMARCE1-219ENST00000583294 KRTAP9-6A0A140TA67 174 aa8.56□□□□□ -1.04
SMARCE1-219ENST00000583294 FAM170BA6NMN3 283 aa8.56□□□□□ -1.04
SMARCE1-219ENST00000583294 EOMESO95936 686 aa8.56□□□□□ -1.04
SMARCE1-219ENST00000583294 SHKBP1Q8TBC3 707 aa8.56□□□□□ -1.04
SMARCE1-219ENST00000583294 ZNF512BQ96KM6 892 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-219ENST00000583294 SLC12A7Q9Y666 1083 aa8.56□□□□□ -1.04
SMARCE1-219ENST00000583294 CNTNAP4Q9C0A0 1308 aa8.55□□□□□ -1.04
SMARCE1-219ENST00000583294 CCDC85CA6NKD9 419 aa8.55□□□□□ -1.04
SMARCE1-219ENST00000583294 B2RBV5 119 aa8.55□□□□□ -1.04
SMARCE1-219ENST00000583294 CLEC3AO75596 197 aa8.55□□□□□ -1.04
SMARCE1-219ENST00000583294 DDAH1O94760 285 aa8.55□□□□□ -1.04
SMARCE1-219ENST00000583294 CCNFP41002 786 aa8.55□□□□□ -1.04
SMARCE1-219ENST00000583294 FXNQ16595 210 aa8.55□□□□□ -1.04
SMARCE1-219ENST00000583294 CCDC144BQ3MJ40 725 aa8.55□□□□□ -1.04
SMARCE1-219ENST00000583294 TDRD10Q5VZ19 366 aaKnown RBP8.55□□□□□ -1.04
SMARCE1-219ENST00000583294 OGFOD3Q6PK18 319 aa8.55□□□□□ -1.04
SMARCE1-219ENST00000583294 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.55□□□□□ -1.04
SMARCE1-219ENST00000583294 KIAA1324LA8MWY0 1029 aaPredicted RBP8.54□□□□□ -1.04
SMARCE1-219ENST00000583294 WDR64B1ANS9 1081 aa8.54□□□□□ -1.04
SMARCE1-219ENST00000583294 TP53P04637 393 aaPredicted RBP8.54□□□□□ -1.04
SMARCE1-219ENST00000583294 F13BP05160 661 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms