RNA–Protein interactions for RNA: ENST00000574639.1

TFAP4-204, Transcript of transcription factor AP-4, human

TSL 5

Gene TFAP4, Length 595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TFAP4-204	ENST00000574639	CYP2D6	P10635	497 aa		13.64	□□□□□ -0.23
TFAP4-204	ENST00000574639	MNX1	P50219	401 aa	Predicted RBP	13.64	□□□□□ -0.23
TFAP4-204	ENST00000574639	ABCB5	Q2M3G0	1257 aa		13.64	□□□□□ -0.23
TFAP4-204	ENST00000574639	KIAA1755	Q5JYT7	1200 aa		13.64	□□□□□ -0.23
TFAP4-204	ENST00000574639	MAP3K21	Q5TCX8	1036 aa		13.64	□□□□□ -0.23
TFAP4-204	ENST00000574639	CATSPERG	Q6ZRH7	1159 aa		13.64	□□□□□ -0.23
TFAP4-204	ENST00000574639	U2AF1L4	Q8WU68	220 aa	Known RBP	13.64	□□□□□ -0.23
TFAP4-204	ENST00000574639	LRRCC1	Q9C099	1032 aa		13.64	□□□□□ -0.23
TFAP4-204	ENST00000574639	RNF208	Q9H0X6	261 aa		13.64	□□□□□ -0.23
TFAP4-204	ENST00000574639	ARMT1	Q9H993	441 aa		13.64	□□□□□ -0.23
TFAP4-204	ENST00000574639	TAOK2	Q9UL54	1235 aa		13.64	□□□□□ -0.23
TFAP4-204	ENST00000574639	RANBP2	P49792	3224 aa	Known RBP	13.63	□□□□□ -0.23
TFAP4-204	ENST00000574639	TRIM32	Q13049	653 aa		13.63	□□□□□ -0.23
TFAP4-204	ENST00000574639	SEPT2	Q15019	361 aa		13.63	□□□□□ -0.23
TFAP4-204	ENST00000574639	C12orf60	Q5U649	245 aa		13.63	□□□□□ -0.23
TFAP4-204	ENST00000574639	SLC44A5	Q8NCS7	719 aa		13.63	□□□□□ -0.23
TFAP4-204	ENST00000574639	NKX2-3	Q8TAU0	364 aa		13.63	□□□□□ -0.23
TFAP4-204	ENST00000574639	COA7	Q96BR5	231 aa		13.63	□□□□□ -0.23
TFAP4-204	ENST00000574639	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.63	□□□□□ -0.23
TFAP4-204	ENST00000574639	PUS7L	Q9H0K6	701 aa	Known RBP	13.63	□□□□□ -0.23
TFAP4-204	ENST00000574639	PORCN	Q9H237	461 aa		13.63	□□□□□ -0.23
TFAP4-204	ENST00000574639	MCM9	Q9NXL9	1143 aa		13.63	□□□□□ -0.23
TFAP4-204	ENST00000574639	TMOD4	Q9NZQ9	345 aa		13.63	□□□□□ -0.23
TFAP4-204	ENST00000574639	XRCC5	P13010	732 aa	Known RBP	13.62	□□□□□ -0.23
TFAP4-204	ENST00000574639	ERVK-9	P63128	1117 aa		13.62	□□□□□ -0.23
TFAP4-204	ENST00000574639	ERVK-24	P63145	666 aa		13.62	□□□□□ -0.23
TFAP4-204	ENST00000574639	UBXN2A	P68543	259 aa		13.62	□□□□□ -0.23
TFAP4-204	ENST00000574639	MORN1	Q5T089	497 aa		13.62	□□□□□ -0.23
TFAP4-204	ENST00000574639	GPRC5A	Q8NFJ5	357 aa		13.62	□□□□□ -0.23
TFAP4-204	ENST00000574639	TRIB2	Q92519	343 aa		13.62	□□□□□ -0.23
TFAP4-204	ENST00000574639	DYNLL2	Q96FJ2	89 aa		13.62	□□□□□ -0.23
TFAP4-204	ENST00000574639	ATP8A2	Q9NTI2	1148 aa		13.62	□□□□□ -0.23
TFAP4-204	ENST00000574639	SALL3	Q9BXA9	1300 aa		13.62	□□□□□ -0.23
TFAP4-204	ENST00000574639	CYP2D7	A0A087X1C5	515 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	USP17L15	C9J2P7	530 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	USP17L13	C9JLJ4	530 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	USP17L11	C9JVI0	530 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	USP17L18	D6R9N7	530 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	USP17L22	D6RA61	530 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	USP17L17	D6RBQ6	530 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	USP17L19	D6RCP7	530 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	USP17L20	D6RJB6	530 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	MBD4	O95243	580 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	POLR3D	P05423	398 aa	Predicted RBP	13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	CAPN2	P17655	700 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	VCAM1	P19320	739 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	USP17L24	Q0WX57	530 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	HABP4	Q5JVS0	413 aa	Known RBP	13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	STRBP	Q96SI9	672 aa	Known RBP	13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	PRO3102	Q9H379	93 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	ECHDC1	Q9NTX5	307 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	BTBD7	Q9P203	1132 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	RABGAP1	Q9Y3P9	1069 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	SZT2	Q5T011	3432 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	ZNF236	Q9UL36	1845 aa		13.61	□□□□□ -0.23
TFAP4-204	ENST00000574639	MYH4	Q9Y623	1939 aa		13.6	□□□□□ -0.23
TFAP4-204	ENST00000574639	SMCHD1	A6NHR9	2005 aa		13.6	□□□□□ -0.23
TFAP4-204	ENST00000574639	USP14	P54578	494 aa		13.6	□□□□□ -0.23
TFAP4-204	ENST00000574639	IRX3	P78415	501 aa	Predicted RBP	13.6	□□□□□ -0.23
TFAP4-204	ENST00000574639	RAB3GAP1	Q15042	981 aa		13.6	□□□□□ -0.23
TFAP4-204	ENST00000574639	CTR9	Q6PD62	1173 aa		13.6	□□□□□ -0.23
TFAP4-204	ENST00000574639	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
TFAP4-204	ENST00000574639	TRIM34	Q9BYJ4	488 aa		13.6	□□□□□ -0.23
TFAP4-204	ENST00000574639	DNAH12	Q6ZR08	3092 aa		13.6	□□□□□ -0.23
TFAP4-204	ENST00000574639	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	GSG1L2	A8MUP6	293 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	USP17L12	C9JPN9	530 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	USP17L21	D6R901	530 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639		H0YGN5	161 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	HMGCR	P04035	888 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	AKR1B1	P15121	316 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	CDK8	P49336	464 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	C16orf86	Q6ZW13	317 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	GPR142	Q7Z601	462 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	KBTBD3	Q8NAB2	608 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	PI4K2B	Q8TCG2	481 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	OSBP2	Q969R2	916 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	DEFB118	Q96PH6	123 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	BIN2	Q9UBW5	565 aa	Predicted RBP	13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	SWAP70	Q9UH65	585 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	ADAMTS5	Q9UNA0	930 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	RPTOR	Q8N122	1335 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	PLXNA1	Q9UIW2	1896 aa		13.59	□□□□□ -0.23
TFAP4-204	ENST00000574639	MAPK4	P31152	587 aa		13.58	□□□□□ -0.24
TFAP4-204	ENST00000574639	ZYX	Q15942	572 aa	Known RBP	13.58	□□□□□ -0.24
TFAP4-204	ENST00000574639	SBK1	Q52WX2	424 aa		13.58	□□□□□ -0.24
TFAP4-204	ENST00000574639	TMEM179	Q6ZVK1	233 aa		13.58	□□□□□ -0.24
TFAP4-204	ENST00000574639	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.58	□□□□□ -0.24
TFAP4-204	ENST00000574639	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
TFAP4-204	ENST00000574639	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.58	□□□□□ -0.24	1e-5	■■■□□ 18
TFAP4-204	ENST00000574639	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.58	□□□□□ -0.24
TFAP4-204	ENST00000574639	CABP5	Q9NP86	173 aa		13.58	□□□□□ -0.24
TFAP4-204	ENST00000574639	COLQ	Q9Y215	455 aa	Predicted RBP	13.58	□□□□□ -0.24
TFAP4-204	ENST00000574639	TMX2	Q9Y320	296 aa		13.58	□□□□□ -0.24
TFAP4-204	ENST00000574639	HOXC6	P09630	235 aa		13.57	□□□□□ -0.24
TFAP4-204	ENST00000574639	CYP2B6	P20813	491 aa		13.57	□□□□□ -0.24
TFAP4-204	ENST00000574639	CACNB2	Q08289	660 aa	Predicted RBP	13.57	□□□□□ -0.24
TFAP4-204	ENST00000574639	CCL14	Q16627	93 aa		13.57	□□□□□ -0.24
TFAP4-204	ENST00000574639	TSHZ3	Q63HK5	1081 aa		13.57	□□□□□ -0.24

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