RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 PCMTD2Q9NV79 361 aa5.75□□□□□ -1.49
LRP6-207ENST00000545658 TFCP2L1Q9NZI6 479 aa5.75□□□□□ -1.49
LRP6-207ENST00000545658 CD2APQ9Y5K6 639 aa5.75□□□□□ -1.49
LRP6-207ENST00000545658 NHSQ6T4R5 1651 aa5.75□□□□□ -1.49
LRP6-207ENST00000545658 AKAP12Q02952 1782 aa5.75□□□□□ -1.49
LRP6-207ENST00000545658 WDR17Q8IZU2 1322 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 USP6P35125 1406 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 TNS2Q63HR2 1409 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 QSER1Q2KHR3 1735 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 KRTAP4-8A0A0G2JLE6 195 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 ZBTB7CA1YPR0 619 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 SOX1O00570 391 aaPredicted RBP5.74□□□□□ -1.49
LRP6-207ENST00000545658 IGLV1-40P01703 118 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 IKBKEQ14164 716 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 VN1R5Q7Z5H4 357 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 SLC51AQ86UW1 340 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 TRIM42Q8IWZ5 723 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 GJD3Q8N144 294 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 MYRFLQ96LU7 910 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 ARID3AQ99856 593 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 C7orf69Q9H7B7 122 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 POLR3AO14802 1390 aaPredicted RBP5.74□□□□□ -1.49
LRP6-207ENST00000545658 WNK3Q9BYP7 1800 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 ARHGEF28Q8N1W1 1705 aaKnown RBP5.74□□□□□ -1.49
LRP6-207ENST00000545658 ACEP12821 1306 aa5.74□□□□□ -1.49
LRP6-207ENST00000545658 LOC105371045A0A1W2PR82 267 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 HMX2A2RU54 273 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 BMP3P12645 472 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 PREPP48147 710 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 FSTL1Q12841 308 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 UVSSAQ2YD98 709 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 ANKRD34AQ69YU3 496 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 FDX2Q6P4F2 183 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 USP26Q9BXU7 913 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 RNF208Q9H0X6 261 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 KCNF1Q9H3M0 494 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 ZFYVE28Q9HCC9 887 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 NMRK2Q9NPI5 230 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 TRAK1Q9UPV9 953 aa5.73□□□□□ -1.49
LRP6-207ENST00000545658 METTL12A8MUP2 240 aa5.72□□□□□ -1.49
LRP6-207ENST00000545658 H3BRB1 525 aa5.72□□□□□ -1.49
LRP6-207ENST00000545658 GSC2O15499 205 aa5.72□□□□□ -1.49
LRP6-207ENST00000545658 ICMTO60725 284 aa5.72□□□□□ -1.49
LRP6-207ENST00000545658 SERPINB4P48594 390 aa5.72□□□□□ -1.49
LRP6-207ENST00000545658 PEAR1Q5VY43 1037 aaPredicted RBP5.72□□□□□ -1.49
LRP6-207ENST00000545658 GLYCTKQ8IVS8 523 aa5.72□□□□□ -1.49
LRP6-207ENST00000545658 FAM20CQ8IXL6 584 aa5.72□□□□□ -1.49
LRP6-207ENST00000545658 TUT1Q9H6E5 874 aaKnown RBP5.72□□□□□ -1.49
LRP6-207ENST00000545658 USTQ9Y2C2 406 aa5.72□□□□□ -1.49
LRP6-207ENST00000545658 IGSF1Q8N6C5 1336 aa5.72□□□□□ -1.49
LRP6-207ENST00000545658 ITSN1Q15811 1721 aa5.71□□□□□ -1.49
LRP6-207ENST00000545658 CICQ96RK0 1608 aaPredicted RBP5.71□□□□□ -1.5
LRP6-207ENST00000545658 ABCC6O95255 1503 aa5.71□□□□□ -1.5
LRP6-207ENST00000545658 GAS2O43903 313 aaKnown RBP5.71□□□□□ -1.5
LRP6-207ENST00000545658 TGFB1P01137 390 aa5.71□□□□□ -1.5
LRP6-207ENST00000545658 NFIAQ12857 509 aa5.71□□□□□ -1.5
LRP6-207ENST00000545658 B4GALNT3Q6L9W6 998 aa5.71□□□□□ -1.5
LRP6-207ENST00000545658 BEND4Q6ZU67 534 aa5.71□□□□□ -1.5
LRP6-207ENST00000545658 COL23A1Q86Y22 540 aaPredicted RBP5.71□□□□□ -1.5
LRP6-207ENST00000545658 C16orf71Q8IYS4 520 aaPredicted RBP5.71□□□□□ -1.5
LRP6-207ENST00000545658 BHLHE41Q9C0J9 482 aaPredicted RBP5.71□□□□□ -1.5
LRP6-207ENST00000545658 BRPF3Q9ULD4 1205 aa5.71□□□□□ -1.5
LRP6-207ENST00000545658 PPIP5K1Q6PFW1 1433 aa5.71□□□□□ -1.5
LRP6-207ENST00000545658 BTAF1O14981 1849 aa5.71□□□□□ -1.5
LRP6-207ENST00000545658 TUBGCP6Q96RT7 1819 aa5.71□□□□□ -1.5
LRP6-207ENST00000545658 ADGRB1O14514 1584 aa5.71□□□□□ -1.5
LRP6-207ENST00000545658 TRPM1Q7Z4N2 1603 aa5.7□□□□□ -1.5
LRP6-207ENST00000545658 CCDC7Q96M83 1385 aa5.7□□□□□ -1.5
LRP6-207ENST00000545658 SLIT3O75094 1523 aa5.7□□□□□ -1.5
LRP6-207ENST00000545658 MED26O95402 600 aa5.7□□□□□ -1.5
LRP6-207ENST00000545658 GSTM4Q03013 218 aa5.7□□□□□ -1.5
LRP6-207ENST00000545658 RNF43Q68DV7 783 aa5.7□□□□□ -1.5
LRP6-207ENST00000545658 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.7□□□□□ -1.5
LRP6-207ENST00000545658 ZDHHC13Q8IUH4 622 aa5.7□□□□□ -1.5
LRP6-207ENST00000545658 CLEC10AQ8IUN9 316 aa5.7□□□□□ -1.5
LRP6-207ENST00000545658 C12orf50Q8NA57 414 aaPredicted RBP5.7□□□□□ -1.5
LRP6-207ENST00000545658 FAM83CQ9BQN1 747 aa5.7□□□□□ -1.5
LRP6-207ENST00000545658 EGFL7Q9UHF1 273 aa5.7□□□□□ -1.5
LRP6-207ENST00000545658 CPSF1Q10570 1443 aaKnown RBP5.7□□□□□ -1.5
LRP6-207ENST00000545658 COL18A1P39060 1754 aa5.7□□□□□ -1.5
LRP6-207ENST00000545658 LOC100289279A0A1B0GTE1 492 aa5.69□□□□□ -1.5
LRP6-207ENST00000545658 A0A1W2PP55 124 aa5.69□□□□□ -1.5
LRP6-207ENST00000545658 MEGF11A6BM72 1044 aa5.69□□□□□ -1.5
LRP6-207ENST00000545658 COBLO75128 1261 aa5.69□□□□□ -1.5
LRP6-207ENST00000545658 DLGAP3O95886 979 aa5.69□□□□□ -1.5
LRP6-207ENST00000545658 ESRRAP11474 423 aaPredicted RBP5.69□□□□□ -1.5
LRP6-207ENST00000545658 USPL1Q5W0Q7 1092 aa5.69□□□□□ -1.5
LRP6-207ENST00000545658 DBNDD2Q9BQY9 259 aa5.69□□□□□ -1.5
LRP6-207ENST00000545658 CDK19Q9BWU1 502 aa5.69□□□□□ -1.5
LRP6-207ENST00000545658 LIN7BQ9HAP6 207 aa5.69□□□□□ -1.5
LRP6-207ENST00000545658 C10orf71Q711Q0 1435 aa5.68□□□□□ -1.5
LRP6-207ENST00000545658 MAP4P27816 1152 aaKnown RBP5.68□□□□□ -1.5
LRP6-207ENST00000545658 CD97P48960 835 aa5.68□□□□□ -1.5
LRP6-207ENST00000545658 ECM1Q16610 540 aa5.68□□□□□ -1.5
LRP6-207ENST00000545658 SPRED3Q2MJR0 410 aa5.68□□□□□ -1.5
LRP6-207ENST00000545658 SGO2Q562F6 1265 aa5.68□□□□□ -1.5
LRP6-207ENST00000545658 ARHGEF25Q86VW2 580 aa5.68□□□□□ -1.5
LRP6-207ENST00000545658 GALNT12Q8IXK2 581 aa5.68□□□□□ -1.5
LRP6-207ENST00000545658 SMC1BQ8NDV3 1235 aa5.68□□□□□ -1.5
LRP6-207ENST00000545658 SHKBP1Q8TBC3 707 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms