RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 AEBP2Q6ZN18 517 aaPredicted RBP19.44■□□□□ 0.7
LRP6-207ENST00000545658 CHIC1Q5VXU3 224 aa18.64■□□□□ 0.57
LRP6-207ENST00000545658 SENP3Q9H4L4 574 aaPredicted RBP16.54■□□□□ 0.24
LRP6-207ENST00000545658 PHF23Q9BUL5 403 aaPredicted RBP16.37■□□□□ 0.21
LRP6-207ENST00000545658 FOXD1Q16676 465 aa15.4■□□□□ 0.06
LRP6-207ENST00000545658 PLPPR3Q6T4P5 718 aa14.98□□□□□ -0.01
LRP6-207ENST00000545658 POTEDQ86YR6 584 aa14.97□□□□□ -0.01
LRP6-207ENST00000545658 PPP6R1Q9UPN7 881 aa14.57□□□□□ -0.08
LRP6-207ENST00000545658 ADRA2BP18089 450 aa14.55□□□□□ -0.08
LRP6-207ENST00000545658 PIAS4Q8N2W9 510 aaPredicted RBP14.46□□□□□ -0.09
LRP6-207ENST00000545658 MSH5O43196 834 aa14.32□□□□□ -0.12
LRP6-207ENST00000545658 MAPK8IP2Q13387 824 aaPredicted RBP13.32□□□□□ -0.28
LRP6-207ENST00000545658 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
LRP6-207ENST00000545658 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
LRP6-207ENST00000545658 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
LRP6-207ENST00000545658 CNKSR2Q8WXI2 1034 aa12.87□□□□□ -0.35
LRP6-207ENST00000545658 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
LRP6-207ENST00000545658 HOXD11P31277 338 aaPredicted RBP12.72□□□□□ -0.37
LRP6-207ENST00000545658 RNF216Q9NWF9 866 aaPredicted RBP12.69□□□□□ -0.38
LRP6-207ENST00000545658 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
LRP6-207ENST00000545658 NPM3O75607 178 aaKnown RBP12.54□□□□□ -0.4
LRP6-207ENST00000545658 CACNB1Q02641 598 aaPredicted RBP12.52□□□□□ -0.41
LRP6-207ENST00000545658 KCNA4P22459 653 aa12.5□□□□□ -0.41
LRP6-207ENST00000545658 RNF39Q9H2S5 420 aa12.24□□□□□ -0.45
LRP6-207ENST00000545658 DNAJC5BQ9UF47 199 aa12.19□□□□□ -0.46
LRP6-207ENST00000545658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.18□□□□□ -0.468e-7■■■■□ 21.6
LRP6-207ENST00000545658 C1QBPQ07021 282 aaKnown RBP12.06□□□□□ -0.48
LRP6-207ENST00000545658 SLC4A2P04920 1241 aa11.92□□□□□ -0.5
LRP6-207ENST00000545658 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
LRP6-207ENST00000545658 SLC4A1APQ9BWU0 796 aaKnown RBP11.85□□□□□ -0.51
LRP6-207ENST00000545658 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
LRP6-207ENST00000545658 CAPN15O75808 1086 aa11.69□□□□□ -0.54
LRP6-207ENST00000545658 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.63□□□□□ -0.55
LRP6-207ENST00000545658 HNRNPUL2Q1KMD3 747 aaKnown RBP11.63□□□□□ -0.55
LRP6-207ENST00000545658 MYCNP04198 464 aaPredicted RBP11.59□□□□□ -0.55
LRP6-207ENST00000545658 APLP2Q06481 763 aa11.59□□□□□ -0.55
LRP6-207ENST00000545658 POTEHQ6S545 545 aa11.58□□□□□ -0.56
LRP6-207ENST00000545658 SAMD1Q6SPF0 538 aaPredicted RBP11.58□□□□□ -0.56
LRP6-207ENST00000545658 FOXD4L1Q9NU39 408 aa11.58□□□□□ -0.56
LRP6-207ENST00000545658 TRHP20396 242 aaPredicted RBP11.57□□□□□ -0.56
LRP6-207ENST00000545658 DSG3P32926 999 aa11.54□□□□□ -0.56
LRP6-207ENST00000545658 ZBTB22O15209 634 aa11.49□□□□□ -0.57
LRP6-207ENST00000545658 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
LRP6-207ENST00000545658 ABCB7O75027 752 aa11.45□□□□□ -0.58
LRP6-207ENST00000545658 ATF5Q9Y2D1 282 aaPredicted RBP11.34□□□□□ -0.59
LRP6-207ENST00000545658 POLA2Q14181 598 aa11.28□□□□□ -0.6
LRP6-207ENST00000545658 ATXN8OSP0DMR3 200 aa11.17□□□□□ -0.62
LRP6-207ENST00000545658 EHMT2Q96KQ7 1210 aa11.16□□□□□ -0.62
LRP6-207ENST00000545658 CSRNP3Q8WYN3 585 aa11.14□□□□□ -0.63
LRP6-207ENST00000545658 ZBTB12Q9Y330 459 aaPredicted RBP11.03□□□□□ -0.64
LRP6-207ENST00000545658 RBM42Q9BTD8 480 aaKnown RBP10.99□□□□□ -0.65
LRP6-207ENST00000545658 OSCARQ8IYS5 282 aa10.91□□□□□ -0.66
LRP6-207ENST00000545658 FBLN2P98095 1184 aa10.88□□□□□ -0.67
LRP6-207ENST00000545658 MKRN4PQ13434 485 aaPredicted RBP10.8□□□□□ -0.68
LRP6-207ENST00000545658 AKT1S1Q96B36 256 aa10.78□□□□□ -0.68
LRP6-207ENST00000545658 SPDYE2BA6NHP3 402 aa10.71□□□□□ -0.69
LRP6-207ENST00000545658 SPDYE6P0CI01 402 aa10.71□□□□□ -0.69
LRP6-207ENST00000545658 SPDYE2Q495Y8 402 aa10.71□□□□□ -0.69
LRP6-207ENST00000545658 REM2Q8IYK8 340 aaPredicted RBP10.71□□□□□ -0.69
LRP6-207ENST00000545658 CHRDL2Q6WN34 429 aa10.69□□□□□ -0.7
LRP6-207ENST00000545658 ZNF692Q9BU19 519 aaPredicted RBP10.65□□□□□ -0.7
LRP6-207ENST00000545658 PITPNM1O00562 1244 aa10.59□□□□□ -0.71
LRP6-207ENST00000545658 SSUH2Q9Y2M2 353 aa10.58□□□□□ -0.72
LRP6-207ENST00000545658 SP7Q8TDD2 431 aaPredicted RBP10.52□□□□□ -0.73
LRP6-207ENST00000545658 PABPN1Q86U42 306 aaKnown RBP eCLIP10.5□□□□□ -0.73
LRP6-207ENST00000545658 CLEC11AQ9Y240 323 aa10.5□□□□□ -0.73
LRP6-207ENST00000545658 PIP4P2Q8N4L2 257 aa10.49□□□□□ -0.73
LRP6-207ENST00000545658 SPDYE1Q8NFV5 336 aaPredicted RBP10.48□□□□□ -0.73
LRP6-207ENST00000545658 FXR2P51116 673 aaKnown RBP eCLIP10.43□□□□□ -0.74
LRP6-207ENST00000545658 SPDYE4A6NLX3 237 aa10.42□□□□□ -0.74
LRP6-207ENST00000545658 PRR29P0C7W0 189 aa10.34□□□□□ -0.75
LRP6-207ENST00000545658 PRKAR2AP13861 404 aaKnown RBP10.33□□□□□ -0.76
LRP6-207ENST00000545658 HAX1O00165 279 aa10.27□□□□□ -0.77
LRP6-207ENST00000545658 CHADLQ6NUI6 762 aa10.27□□□□□ -0.77
LRP6-207ENST00000545658 STAG3Q9UJ98 1225 aa10.22□□□□□ -0.77
LRP6-207ENST00000545658 EVX2Q03828 476 aa10.15□□□□□ -0.78
LRP6-207ENST00000545658 PROM2Q8N271 834 aa10.13□□□□□ -0.79
LRP6-207ENST00000545658 FKBP8Q14318 412 aa10.12□□□□□ -0.79
LRP6-207ENST00000545658 FARP1Q9Y4F1 1045 aaPredicted RBP10.12□□□□□ -0.79
LRP6-207ENST00000545658 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
LRP6-207ENST00000545658 C19orf67A6NJJ6 358 aa10.09□□□□□ -0.79
LRP6-207ENST00000545658 NISCHQ9Y2I1 1504 aa10.05□□□□□ -0.8
LRP6-207ENST00000545658 CD44P16070 742 aaKnown RBP10.01□□□□□ -0.81
LRP6-207ENST00000545658 MNX1P50219 401 aaPredicted RBP9.94□□□□□ -0.82
LRP6-207ENST00000545658 NPM1P06748 294 aaKnown RBP eCLIP9.93□□□□□ -0.82
LRP6-207ENST00000545658 MIER1Q8N108 512 aa9.93□□□□□ -0.82
LRP6-207ENST00000545658 GABBR2O75899 941 aa9.92□□□□□ -0.82
LRP6-207ENST00000545658 ZRANB1Q9UGI0 708 aa9.92□□□□□ -0.82
LRP6-207ENST00000545658 PLEKHG5O94827 1062 aa9.89□□□□□ -0.83
LRP6-207ENST00000545658 PLCD3Q8N3E9 789 aa9.88□□□□□ -0.83
LRP6-207ENST00000545658 PAK3O75914 559 aaPredicted RBP9.87□□□□□ -0.83
LRP6-207ENST00000545658 LHX8Q68G74 356 aa9.86□□□□□ -0.83
LRP6-207ENST00000545658 PLSCR2Q9NRY7 297 aa9.86□□□□□ -0.83
LRP6-207ENST00000545658 ZNF579Q8NAF0 562 aaKnown RBP9.83□□□□□ -0.84
LRP6-207ENST00000545658 PHF12Q96QT6 1004 aa9.81□□□□□ -0.84
LRP6-207ENST00000545658 FBXO3Q9UK99 471 aa9.81□□□□□ -0.84
LRP6-207ENST00000545658 TSPYL2Q9H2G4 693 aaPredicted RBP9.8□□□□□ -0.84
LRP6-207ENST00000545658 CLCN6P51797 869 aa9.77□□□□□ -0.85
LRP6-207ENST00000545658 GALR2O43603 387 aaPredicted RBP9.74□□□□□ -0.85
LRP6-207ENST00000545658 RASEFQ8IZ41 740 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 228.9 ms