RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 PRR36Q9H6K5 1346 aa11.48□□□□□ -0.57
CSDE1-213ENST00000530784 ARAP1Q96P48 1450 aa11.48□□□□□ -0.57
CSDE1-213ENST00000530784 ROBO2Q9HCK4 1378 aa11.47□□□□□ -0.57
CSDE1-213ENST00000530784 BNIP3Q12983 259 aa11.47□□□□□ -0.57
CSDE1-213ENST00000530784 IFI16Q16666 785 aaKnown RBP11.47□□□□□ -0.57
CSDE1-213ENST00000530784 CWF19L2Q2TBE0 894 aaKnown RBP11.47□□□□□ -0.57
CSDE1-213ENST00000530784 TMEM201Q5SNT2 666 aa11.47□□□□□ -0.57
CSDE1-213ENST00000530784 LRRC3Q9BY71 257 aa11.47□□□□□ -0.57
CSDE1-213ENST00000530784 REV1Q9UBZ9 1251 aa11.47□□□□□ -0.57
CSDE1-213ENST00000530784 MAGI1Q96QZ7 1491 aaPredicted RBP11.46□□□□□ -0.57
CSDE1-213ENST00000530784 HTR3BO95264 441 aa11.46□□□□□ -0.57
CSDE1-213ENST00000530784 CDH24Q86UP0 819 aa11.46□□□□□ -0.57
CSDE1-213ENST00000530784 FLCNQ8NFG4 579 aa11.46□□□□□ -0.57
CSDE1-213ENST00000530784 RNF34Q969K3 372 aa11.46□□□□□ -0.57
CSDE1-213ENST00000530784 BRMS1Q9HCU9 246 aa11.46□□□□□ -0.57
CSDE1-213ENST00000530784 UBP1Q9NZI7 540 aa11.46□□□□□ -0.57
CSDE1-213ENST00000530784 KIAA1522Q9P206 1035 aaPredicted RBP11.46□□□□□ -0.57
CSDE1-213ENST00000530784 MAPK8IP1Q9UQF2 711 aa11.46□□□□□ -0.57
CSDE1-213ENST00000530784 SLC5A6Q9Y289 635 aa11.46□□□□□ -0.57
CSDE1-213ENST00000530784 GRIN2BQ13224 1484 aa11.45□□□□□ -0.58
CSDE1-213ENST00000530784 GNAT3A8MTJ3 354 aa11.45□□□□□ -0.58
CSDE1-213ENST00000530784 PRR33A8MZF0 331 aa11.45□□□□□ -0.58
CSDE1-213ENST00000530784 NKPD1Q17RQ9 610 aa11.45□□□□□ -0.58
CSDE1-213ENST00000530784 ZNF394Q53GI3 561 aa11.45□□□□□ -0.58
CSDE1-213ENST00000530784 ZNF574Q6ZN55 896 aaPredicted RBP11.45□□□□□ -0.58
CSDE1-213ENST00000530784 SPRED2Q7Z698 418 aa11.45□□□□□ -0.58
CSDE1-213ENST00000530784 FAM13CQ8NE31 585 aa11.45□□□□□ -0.58
CSDE1-213ENST00000530784 FBXL18Q96ME1 805 aa11.45□□□□□ -0.58
CSDE1-213ENST00000530784 TNKS2Q9H2K2 1166 aa11.45□□□□□ -0.58
CSDE1-213ENST00000530784 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
CSDE1-213ENST00000530784 CLASP1Q7Z460 1538 aa11.45□□□□□ -0.58
CSDE1-213ENST00000530784 TMEM265A0A087WTH1 108 aa11.44□□□□□ -0.58
CSDE1-213ENST00000530784 SFRP5Q5T4F7 317 aa11.44□□□□□ -0.58
CSDE1-213ENST00000530784 USP48Q86UV5 1035 aa11.44□□□□□ -0.58
CSDE1-213ENST00000530784 WFDC3Q8IUB2 231 aa11.44□□□□□ -0.58
CSDE1-213ENST00000530784 SPACA3Q8IXA5 215 aa11.44□□□□□ -0.58
CSDE1-213ENST00000530784 TP53INP2Q8IXH6 220 aa11.44□□□□□ -0.58
CSDE1-213ENST00000530784 STK11IPQ8N1F8 1099 aa11.44□□□□□ -0.58
CSDE1-213ENST00000530784 MISP3Q96FF7 219 aa11.44□□□□□ -0.58
CSDE1-213ENST00000530784 PAK6Q9NQU5 681 aaPredicted RBP11.44□□□□□ -0.58
CSDE1-213ENST00000530784 PCDHGB7Q9Y5F8 929 aa11.44□□□□□ -0.58
CSDE1-213ENST00000530784 CHURC1-FNTBB4DL54 471 aa11.43□□□□□ -0.58
CSDE1-213ENST00000530784 SCAMP3O14828 347 aaKnown RBP11.43□□□□□ -0.58
CSDE1-213ENST00000530784 PRKCQQ04759 706 aa11.43□□□□□ -0.58
CSDE1-213ENST00000530784 SPON2Q9BUD6 331 aa11.43□□□□□ -0.58
CSDE1-213ENST00000530784 KLHL3Q9UH77 587 aa11.43□□□□□ -0.58
CSDE1-213ENST00000530784 VAV3Q9UKW4 847 aa11.43□□□□□ -0.58
CSDE1-213ENST00000530784 SYNJ2O15056 1496 aa11.43□□□□□ -0.58
CSDE1-213ENST00000530784 DNAJA2O60884 412 aa11.42□□□□□ -0.58
CSDE1-213ENST00000530784 CD96P40200 585 aa11.42□□□□□ -0.58
CSDE1-213ENST00000530784 YARSP54577 528 aaKnown RBP11.42□□□□□ -0.58
CSDE1-213ENST00000530784 AOC3Q16853 763 aa11.42□□□□□ -0.58
CSDE1-213ENST00000530784 SEZ6Q53EL9 994 aa11.42□□□□□ -0.58
CSDE1-213ENST00000530784 ZNF746Q6NUN9 644 aaPredicted RBP11.42□□□□□ -0.58
CSDE1-213ENST00000530784 KIAA0825Q8IV33 1275 aa11.42□□□□□ -0.58
CSDE1-213ENST00000530784 ABI1Q8IZP0 508 aa11.42□□□□□ -0.58
CSDE1-213ENST00000530784 DNAJB8Q8NHS0 232 aa11.42□□□□□ -0.58
CSDE1-213ENST00000530784 EAF1Q96JC9 268 aaPredicted RBP11.42□□□□□ -0.58
CSDE1-213ENST00000530784 HRASLS5Q96KN8 279 aa11.42□□□□□ -0.58
CSDE1-213ENST00000530784 APOBRQ0VD83 1088 aa11.41□□□□□ -0.58
CSDE1-213ENST00000530784 PPP1R13LQ8WUF5 828 aa11.41□□□□□ -0.58
CSDE1-213ENST00000530784 NT5C1AQ9BXI3 368 aa11.41□□□□□ -0.58
CSDE1-213ENST00000530784 PCDHB14Q9Y5E9 798 aa11.41□□□□□ -0.58
CSDE1-213ENST00000530784 SNX11Q9Y5W9 270 aa11.41□□□□□ -0.58
CSDE1-213ENST00000530784 GAPVD1Q14C86 1478 aa11.4□□□□□ -0.58
CSDE1-213ENST00000530784 CBX7O95931 251 aa11.4□□□□□ -0.58
CSDE1-213ENST00000530784 ZNF865P0CJ78 1059 aaPredicted RBP11.4□□□□□ -0.58
CSDE1-213ENST00000530784 CD8BP10966 210 aa11.4□□□□□ -0.58
CSDE1-213ENST00000530784 RACK1P63244 317 aaKnown RBP11.4□□□□□ -0.58
CSDE1-213ENST00000530784 C22orf34Q6ZV56 151 aa11.4□□□□□ -0.58
CSDE1-213ENST00000530784 SLFN12Q8IYM2 578 aa11.4□□□□□ -0.58
CSDE1-213ENST00000530784 CYB5D2Q8WUJ1 264 aa11.4□□□□□ -0.58
CSDE1-213ENST00000530784 CEP131Q9UPN4 1083 aa11.4□□□□□ -0.58
CSDE1-213ENST00000530784 PBRM1Q86U86 1689 aa11.4□□□□□ -0.59
CSDE1-213ENST00000530784 CYP7A1P22680 504 aa11.39□□□□□ -0.59
CSDE1-213ENST00000530784 METTL16Q86W50 562 aaKnown RBP11.39□□□□□ -0.59
CSDE1-213ENST00000530784 MFSD4AQ8N468 514 aa11.39□□□□□ -0.59
CSDE1-213ENST00000530784 NKD1Q969G9 470 aa11.39□□□□□ -0.59
CSDE1-213ENST00000530784 DDX41Q9UJV9 622 aaKnown RBP11.39□□□□□ -0.59
CSDE1-213ENST00000530784 CAPN6Q9Y6Q1 641 aa11.39□□□□□ -0.59
CSDE1-213ENST00000530784 ABCA10Q8WWZ4 1543 aa11.39□□□□□ -0.59
CSDE1-213ENST00000530784 FAM155AB1AL88 458 aaPredicted RBP11.38□□□□□ -0.59
CSDE1-213ENST00000530784 ATE1O95260 518 aa11.38□□□□□ -0.59
CSDE1-213ENST00000530784 ETV3P41162 512 aa11.38□□□□□ -0.59
CSDE1-213ENST00000530784 ABCA5Q8WWZ7 1642 aa11.38□□□□□ -0.59
CSDE1-213ENST00000530784 MCM4P33991 863 aa11.37□□□□□ -0.59
CSDE1-213ENST00000530784 CLCQ05315 142 aa11.37□□□□□ -0.59
CSDE1-213ENST00000530784 CDKAL1Q5VV42 579 aa11.37□□□□□ -0.59
CSDE1-213ENST00000530784 GK5Q6ZS86 529 aa11.37□□□□□ -0.59
CSDE1-213ENST00000530784 SLITRK4Q8IW52 837 aa11.37□□□□□ -0.59
CSDE1-213ENST00000530784 AGBL5Q8NDL9 886 aa11.37□□□□□ -0.59
CSDE1-213ENST00000530784 HSPA12BQ96MM6 686 aa11.37□□□□□ -0.59
CSDE1-213ENST00000530784 EHMT1Q9H9B1 1298 aa11.37□□□□□ -0.59
CSDE1-213ENST00000530784 SLC22A31A6NKX4 558 aa11.36□□□□□ -0.59
CSDE1-213ENST00000530784 IRAK1P51617 712 aa11.36□□□□□ -0.59
CSDE1-213ENST00000530784 CLCN7P51798 805 aa11.36□□□□□ -0.59
CSDE1-213ENST00000530784 MLECQ14165 292 aa11.36□□□□□ -0.59
CSDE1-213ENST00000530784 C9orf131Q5VYM1 1079 aa11.36□□□□□ -0.59
CSDE1-213ENST00000530784 BAHD1Q8TBE0 780 aaPredicted RBP11.36□□□□□ -0.59
CSDE1-213ENST00000530784 COX4I2Q96KJ9 171 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms