RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 CPLX3Q8WVH0 158 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 EPSTI1Q96J88 318 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 MXD3Q9BW11 206 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 SCG2P13521 617 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 TNNT1P13805 278 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 PLCD1P51178 756 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 KRBA2Q6ZNG9 492 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 FOXP1Q9H334 677 aaPredicted RBP12.97□□□□□ -0.33
CLK4-206ENST00000520878 GPCPD1Q9NPB8 672 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 MAPK8IP1Q9UQF2 711 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 TOGARAM1Q9Y4F4 1720 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 MROH7-TTC4A0A0A0MT08 1334 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 COBLO75128 1261 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 PPP6R2O75170 966 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 PTGDRQ13258 359 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 KIAA0825Q8IV33 1275 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 STAG2Q8N3U4 1231 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 SRBD1Q8N5C6 995 aaKnown RBP12.97□□□□□ -0.33
CLK4-206ENST00000520878 ZNF384Q8TF68 577 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 DBNDD1Q9H9R9 158 aa12.97□□□□□ -0.33
CLK4-206ENST00000520878 BBOX1O75936 387 aa12.96□□□□□ -0.33
CLK4-206ENST00000520878 MMP10P09238 476 aa12.96□□□□□ -0.33
CLK4-206ENST00000520878 CACTINQ8WUQ7 758 aaKnown RBP12.96□□□□□ -0.33
CLK4-206ENST00000520878 POSTNQ15063 836 aa12.96□□□□□ -0.33
CLK4-206ENST00000520878 PPP2R5BQ15173 497 aa12.96□□□□□ -0.33
CLK4-206ENST00000520878 USP17L2Q6R6M4 530 aa12.96□□□□□ -0.33
CLK4-206ENST00000520878 BCL9LQ86UU0 1499 aa12.96□□□□□ -0.34
CLK4-206ENST00000520878 PHLPP1O60346 1717 aa12.96□□□□□ -0.34
CLK4-206ENST00000520878 PPEF1O14829 653 aaPredicted RBP12.96□□□□□ -0.34
CLK4-206ENST00000520878 ATP1A3P13637 1013 aa12.96□□□□□ -0.34
CLK4-206ENST00000520878 U2AF2P26368 475 aaKnown RBP eCLIP12.96□□□□□ -0.341e-7■□□□□ 8
CLK4-206ENST00000520878 NOM1Q5C9Z4 860 aaKnown RBP12.96□□□□□ -0.34
CLK4-206ENST00000520878 TMTC3Q6ZXV5 915 aa12.96□□□□□ -0.34
CLK4-206ENST00000520878 LRRC47Q8N1G4 583 aaKnown RBP12.96□□□□□ -0.34
CLK4-206ENST00000520878 BLZF1Q9H2G9 400 aa12.96□□□□□ -0.34
CLK4-206ENST00000520878 KLRF2D3W0D1 207 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 TOP1P11387 765 aaKnown RBP12.95□□□□□ -0.34
CLK4-206ENST00000520878 UBA7P41226 1012 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 FANCCQ00597 558 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 USP40Q9NVE5 1235 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 FRMPD2Q68DX3 1309 aaPredicted RBP12.95□□□□□ -0.34
CLK4-206ENST00000520878 PRPF3O43395 683 aaKnown RBP12.95□□□□□ -0.34
CLK4-206ENST00000520878 PLCG2P16885 1265 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 GNAQP50148 359 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 CACNB3P54284 484 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 MYL5Q02045 173 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 TROAPQ12815 778 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 IQCB1Q15051 598 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 SEC23AQ15436 765 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 LETM2Q2VYF4 491 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 CCDC144BQ3MJ40 725 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 DACH1Q9UI36 760 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 DDAH1O94760 285 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 PARP1P09874 1014 aaKnown RBP12.95□□□□□ -0.34
CLK4-206ENST00000520878 TM4SF1P30408 202 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 JAKMIP3Q5VZ66 844 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 FANCLQ9NW38 375 aa12.95□□□□□ -0.34
CLK4-206ENST00000520878 SLIT2O94813 1529 aa12.94□□□□□ -0.34
CLK4-206ENST00000520878 LRP6O75581 1613 aa12.94□□□□□ -0.34
CLK4-206ENST00000520878 NHSL1Q5SYE7 1610 aa12.94□□□□□ -0.34
CLK4-206ENST00000520878 VEGFAP15692 232 aaPredicted RBP12.94□□□□□ -0.34
CLK4-206ENST00000520878 INF2Q27J81 1249 aa12.94□□□□□ -0.34
CLK4-206ENST00000520878 C12orf60Q5U649 245 aa12.94□□□□□ -0.34
CLK4-206ENST00000520878 TBC1D16Q8TBP0 767 aa12.94□□□□□ -0.34
CLK4-206ENST00000520878 SYMPKQ92797 1274 aaKnown RBP12.94□□□□□ -0.34
CLK4-206ENST00000520878 TMX1Q9H3N1 280 aa12.94□□□□□ -0.34
CLK4-206ENST00000520878 ITGB4P16144 1822 aa12.94□□□□□ -0.34
CLK4-206ENST00000520878 CALML3P27482 149 aa12.94□□□□□ -0.34
CLK4-206ENST00000520878 TOB1P50616 345 aaPredicted RBP12.94□□□□□ -0.34
CLK4-206ENST00000520878 SMYD4Q8IYR2 804 aaPredicted RBP12.94□□□□□ -0.34
CLK4-206ENST00000520878 POLLQ9UGP5 575 aa12.94□□□□□ -0.34
CLK4-206ENST00000520878 STK36Q9NRP7 1315 aa12.94□□□□□ -0.34
CLK4-206ENST00000520878 CBFA2T2O43439 604 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 CDK8P49336 464 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 CLEC10AQ8IUN9 316 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 KCNF1Q9H3M0 494 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 TUBGCP6Q96RT7 1819 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 SSBP05455 408 aaKnown RBP eCLIP12.93□□□□□ -0.34
CLK4-206ENST00000520878 GOLGA8FQ08AF8 430 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 GOLGA8DPQ0D2H9 430 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 PTPAQ15257 358 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 PTPN14Q15678 1187 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 RESP18Q5W5W9 173 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 DHX40Q8IX18 779 aaKnown RBP12.93□□□□□ -0.34
CLK4-206ENST00000520878 NLGN1Q8N2Q7 840 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 NFE2L3Q9Y4A8 694 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 ADRA2BP18089 450 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 RBM6P78332 1123 aaKnown RBP12.93□□□□□ -0.34
CLK4-206ENST00000520878 EARS2Q5JPH6 523 aaKnown RBP12.93□□□□□ -0.34
CLK4-206ENST00000520878 RRAGBQ5VZM2 374 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 RASGRP2Q7LDG7 609 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 NBPF11Q86T75 865 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 ANAPC4Q9UJX5 808 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 DOT1LQ8TEK3 1739 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 GLI3P10071 1580 aa12.93□□□□□ -0.34
CLK4-206ENST00000520878 PCP11498 1178 aaKnown RBP12.92□□□□□ -0.34
CLK4-206ENST00000520878 PTPREP23469 700 aa12.92□□□□□ -0.34
CLK4-206ENST00000520878 KANK3Q6NY19 840 aa12.92□□□□□ -0.34
CLK4-206ENST00000520878 TBC1D22AQ8WUA7 517 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms