RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 CCDC144CPQ8IYA2 1237 aa12.4□□□□□ -0.43
DHFR-205ENST00000511032 NLGN2Q8NFZ4 835 aa12.4□□□□□ -0.43
DHFR-205ENST00000511032 DDX4Q9NQI0 724 aaKnown RBP12.4□□□□□ -0.43
DHFR-205ENST00000511032 PLIN4Q96Q06 1357 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 DEXIO95424 95 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 FMNL1O95466 1100 aaPredicted RBP12.39□□□□□ -0.43
DHFR-205ENST00000511032 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 RXRAP19793 462 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 LMNB1P20700 586 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 GABPAQ06546 454 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 TCP10Q12799 353 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 GNL2Q13823 731 aaKnown RBP12.39□□□□□ -0.43
DHFR-205ENST00000511032 SAFBQ15424 915 aaKnown RBP eCLIP12.39□□□□□ -0.431e-6■■■■□ 20.9
DHFR-205ENST00000511032 ATL3Q6DD88 541 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 ARHGAP27Q6ZUM4 889 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 CDC37L1Q7L3B6 337 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 PNMA1Q8ND90 353 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 DPF2Q92785 391 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 LZTS2Q9BRK4 669 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 ALG1Q9BT22 464 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 SLC26A6Q9BXS9 759 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 RNF26Q9BY78 433 aaPredicted RBP12.39□□□□□ -0.43
DHFR-205ENST00000511032 FHDC1Q9C0D6 1143 aaPredicted RBP12.39□□□□□ -0.43
DHFR-205ENST00000511032 HERC5Q9UII4 1024 aaKnown RBP12.39□□□□□ -0.43
DHFR-205ENST00000511032 CFAP45Q9UL16 551 aa12.39□□□□□ -0.43
DHFR-205ENST00000511032 ATRNL1Q5VV63 1379 aa12.38□□□□□ -0.43
DHFR-205ENST00000511032 MBD3O95983 291 aa12.38□□□□□ -0.43
DHFR-205ENST00000511032 TOP1P11387 765 aaKnown RBP12.38□□□□□ -0.43
DHFR-205ENST00000511032 CDC27P30260 824 aa12.38□□□□□ -0.43
DHFR-205ENST00000511032 RASSF7Q02833 373 aa12.38□□□□□ -0.43
DHFR-205ENST00000511032 NFIAQ12857 509 aa12.38□□□□□ -0.43
DHFR-205ENST00000511032 FAM83AQ86UY5 434 aa12.38□□□□□ -0.43
DHFR-205ENST00000511032 SLC44A5Q8NCS7 719 aa12.38□□□□□ -0.43
DHFR-205ENST00000511032 FAM151AQ8WW52 585 aa12.38□□□□□ -0.43
DHFR-205ENST00000511032 PRMT6Q96LA8 375 aaPredicted RBP12.38□□□□□ -0.43
DHFR-205ENST00000511032 ZNF396Q96N95 335 aaPredicted RBP12.38□□□□□ -0.43
DHFR-205ENST00000511032 MYL10Q9BUA6 226 aa12.38□□□□□ -0.43
DHFR-205ENST00000511032 SENP2Q9HC62 589 aa12.38□□□□□ -0.43
DHFR-205ENST00000511032 MYOZ2Q9NPC6 264 aa12.38□□□□□ -0.43
DHFR-205ENST00000511032 COL4A5P29400 1685 aa12.37□□□□□ -0.43
DHFR-205ENST00000511032 H7C1D1 291 aa12.37□□□□□ -0.43
DHFR-205ENST00000511032 SMIM22K7EJ46 135 aa12.37□□□□□ -0.43
DHFR-205ENST00000511032 FZD9O00144 591 aa12.37□□□□□ -0.43
DHFR-205ENST00000511032 MPHOSPH10O00566 681 aaKnown RBP12.37□□□□□ -0.43
DHFR-205ENST00000511032 TRAK2O60296 914 aa12.37□□□□□ -0.43
DHFR-205ENST00000511032 TROAPQ12815 778 aa12.37□□□□□ -0.43
DHFR-205ENST00000511032 SCAND2PQ9GZW5 306 aaPredicted RBP12.37□□□□□ -0.43
DHFR-205ENST00000511032 VEZTQ9HBM0 779 aa12.37□□□□□ -0.43
DHFR-205ENST00000511032 CABP5Q9NP86 173 aa12.37□□□□□ -0.43
DHFR-205ENST00000511032 ZNF70Q9UC06 446 aaPredicted RBP12.37□□□□□ -0.43
DHFR-205ENST00000511032 FAM198AQ9UFP1 575 aa12.37□□□□□ -0.43
DHFR-205ENST00000511032 GJA3Q9Y6H8 435 aa12.37□□□□□ -0.43
DHFR-205ENST00000511032 NMT2O60551 498 aa12.36□□□□□ -0.43
DHFR-205ENST00000511032 TTLL1O95922 423 aa12.36□□□□□ -0.43
DHFR-205ENST00000511032 CACNB3P54284 484 aa12.36□□□□□ -0.43
DHFR-205ENST00000511032 CERKLQ49MI3 558 aaPredicted RBP12.36□□□□□ -0.43
DHFR-205ENST00000511032 BRAPQ7Z569 592 aa12.36□□□□□ -0.43
DHFR-205ENST00000511032 FBXO18Q8NFZ0 1043 aa12.36□□□□□ -0.43
DHFR-205ENST00000511032 NKX2-3Q8TAU0 364 aa12.36□□□□□ -0.43
DHFR-205ENST00000511032 PHKBQ93100 1093 aa12.36□□□□□ -0.43
DHFR-205ENST00000511032 CSRNP1Q96S65 589 aa12.36□□□□□ -0.43
DHFR-205ENST00000511032 BRMS1Q9HCU9 246 aa12.36□□□□□ -0.43
DHFR-205ENST00000511032 DDX49Q9Y6V7 483 aaKnown RBP12.36□□□□□ -0.43
DHFR-205ENST00000511032 DICER1Q9UPY3 1922 aaKnown RBP12.36□□□□□ -0.43
DHFR-205ENST00000511032 TCP10L2B9ZVM9 353 aa12.35□□□□□ -0.43
DHFR-205ENST00000511032 PRPF40AO75400 957 aaKnown RBP12.35□□□□□ -0.43
DHFR-205ENST00000511032 ZNF280AP59817 542 aaPredicted RBP12.35□□□□□ -0.43
DHFR-205ENST00000511032 NTRK3Q16288 839 aa12.35□□□□□ -0.43
DHFR-205ENST00000511032 RBM26Q5T8P6 1007 aaKnown RBP12.35□□□□□ -0.43
DHFR-205ENST00000511032 TMEM179Q6ZVK1 233 aa12.35□□□□□ -0.43
DHFR-205ENST00000511032 TMTC3Q6ZXV5 915 aa12.35□□□□□ -0.43
DHFR-205ENST00000511032 FERMT3Q86UX7 667 aa12.35□□□□□ -0.43
DHFR-205ENST00000511032 SYAP1Q96A49 352 aaPredicted RBP12.35□□□□□ -0.43
DHFR-205ENST00000511032 HOOK2Q96ED9 719 aa12.35□□□□□ -0.43
DHFR-205ENST00000511032 CEP95Q96GE4 821 aa12.35□□□□□ -0.43
DHFR-205ENST00000511032 TMEM47Q9BQJ4 181 aa12.35□□□□□ -0.43
DHFR-205ENST00000511032 IL17RBQ9NRM6 502 aa12.35□□□□□ -0.43
DHFR-205ENST00000511032 FAM217BQ9NTX9 383 aaPredicted RBP12.35□□□□□ -0.43
DHFR-205ENST00000511032 MYH6P13533 1939 aa12.35□□□□□ -0.43
DHFR-205ENST00000511032 CLRN2A0PK11 232 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 GOLGA6L4A6NEF3 574 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 C19orf67A6NJJ6 358 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 PRPF3O43395 683 aaKnown RBP12.34□□□□□ -0.43
DHFR-205ENST00000511032 PARP1P09874 1014 aaKnown RBP12.34□□□□□ -0.43
DHFR-205ENST00000511032 FDPSP14324 419 aaKnown RBP12.34□□□□□ -0.43
DHFR-205ENST00000511032 SHMT1P34896 483 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 GMPSP49915 693 aaPredicted RBP12.34□□□□□ -0.43
DHFR-205ENST00000511032 FOSBP53539 338 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 RESTQ13127 1097 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 GRM4Q14833 912 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 FOXD4L6Q3SYB3 417 aaPredicted RBP12.34□□□□□ -0.43
DHFR-205ENST00000511032 RCSD1Q6JBY9 416 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 CHADLQ6NUI6 762 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 FOXD4L3Q6VB84 417 aaPredicted RBP12.34□□□□□ -0.43
DHFR-205ENST00000511032 FAM177A1Q8N128 213 aaPredicted RBP12.34□□□□□ -0.43
DHFR-205ENST00000511032 TMEM87AQ8NBN3 555 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 SYT17Q9BSW7 474 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 KANSL2Q9H9L4 492 aa12.34□□□□□ -0.43
DHFR-205ENST00000511032 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■□□□ 13.2
DHFR-205ENST00000511032 MTMR4Q9NYA4 1195 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms