RNA–Protein interactions for RNA: ENST00000499786.4

MED28-202, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-202ENST00000499786 CRY2Q49AN0 593 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 SPTY2D1Q68D10 685 aaPredicted RBP8.27□□□□□ -1.09
MED28-202ENST00000499786 TMED8Q6PL24 325 aaPredicted RBP8.27□□□□□ -1.09
MED28-202ENST00000499786 Q6ZVU0 165 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 RALYLQ86SE5 291 aaKnown RBP8.27□□□□□ -1.09
MED28-202ENST00000499786 MAGEB6Q8N7X4 407 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 CHMP4CQ96CF2 233 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 INTS4Q96HW7 963 aaKnown RBP8.27□□□□□ -1.09
MED28-202ENST00000499786 NEK1Q96PY6 1258 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 NACAP1Q9BZK3 213 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 ZFAND3Q9H8U3 227 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 PIH1D3Q9NQM4 214 aaKnown RBP8.27□□□□□ -1.09
MED28-202ENST00000499786 GGA1Q9UJY5 639 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 SERPINA10Q9UK55 444 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 LIMCH1Q9UPQ0 1083 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 PCDHB11Q9Y5F2 797 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 COL4A1P02462 1669 aa8.27□□□□□ -1.09
MED28-202ENST00000499786 LAMA4Q16363 1823 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 LRRC37AA6NMS7 1700 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 USP17L5A8MUK1 530 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 LCE2BO14633 110 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 IGSF3O75054 1194 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 BBOX1O75936 387 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 UFL1O94874 794 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 MMP10P09238 476 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 RPS6KB1P23443 525 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 ATP2B4P23634 1241 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 AK2P54819 239 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 TRDNQ13061 729 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 NFKBIBQ15653 356 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 COL23A1Q86Y22 540 aaPredicted RBP8.26□□□□□ -1.09
MED28-202ENST00000499786 CCDC82Q8N4S0 544 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 KDF1Q8NAX2 398 aaPredicted RBP8.26□□□□□ -1.09
MED28-202ENST00000499786 OSBP2Q969R2 916 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 CRAMP1Q96RY5 1269 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 NOL10Q9BSC4 688 aaKnown RBP8.26□□□□□ -1.09
MED28-202ENST00000499786 BRIP1Q9BX63 1249 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 PGPEP1Q9NXJ5 209 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 ABCF2Q9UG63 623 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 WWC3Q9ULE0 1092 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 DOLKQ9UPQ8 538 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 ZMYM6O95789 1325 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 PNPLA7Q6ZV29 1317 aa8.26□□□□□ -1.09
MED28-202ENST00000499786 SNAP23O00161 211 aa8.25□□□□□ -1.09
MED28-202ENST00000499786 MBD4O95243 580 aa8.25□□□□□ -1.09
MED28-202ENST00000499786 ZIC2O95409 532 aaPredicted RBP8.25□□□□□ -1.09
MED28-202ENST00000499786 NPR1P16066 1061 aa8.25□□□□□ -1.09
MED28-202ENST00000499786 ALDH1B1P30837 517 aa8.25□□□□□ -1.09
MED28-202ENST00000499786 TDO2P48775 406 aa8.25□□□□□ -1.09
MED28-202ENST00000499786 CHAF1AQ13111 956 aaPredicted RBP8.25□□□□□ -1.09
MED28-202ENST00000499786 CUL4AQ13619 759 aa8.25□□□□□ -1.09
MED28-202ENST00000499786 CTC1Q2NKJ3 1217 aa8.25□□□□□ -1.09
MED28-202ENST00000499786 PKDCCQ504Y2 493 aa8.25□□□□□ -1.09
MED28-202ENST00000499786 NAA16Q6N069 864 aaPredicted RBP8.25□□□□□ -1.09
MED28-202ENST00000499786 DZIP1Q86YF9 867 aaKnown RBP8.25□□□□□ -1.09
MED28-202ENST00000499786 TTC14Q96N46 770 aa8.25□□□□□ -1.09
MED28-202ENST00000499786 NAPBQ9H115 298 aa8.25□□□□□ -1.09
MED28-202ENST00000499786 IQSEC3Q9UPP2 1182 aaPredicted RBP8.25□□□□□ -1.09
MED28-202ENST00000499786 SMC3Q9UQE7 1217 aa8.25□□□□□ -1.09
MED28-202ENST00000499786 CCDC88AQ3V6T2 1871 aa8.25□□□□□ -1.09
MED28-202ENST00000499786 ANKRD31Q8N7Z5 1873 aa8.25□□□□□ -1.09
MED28-202ENST00000499786 USP17L3A6NCW0 530 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 USP17L4A6NCW7 530 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 ZNF213O14771 459 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 CYP21A2P08686 494 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 CYP7A1P22680 504 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 HOXA10P31260 410 aaPredicted RBP8.24□□□□□ -1.09
MED28-202ENST00000499786 GSTO1P78417 241 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 RAB3GAP1Q15042 981 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 EZH2Q15910 746 aaKnown RBP8.24□□□□□ -1.09
MED28-202ENST00000499786 SLC15A2Q16348 729 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 ADCK5Q3MIX3 580 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 MSL1Q68DK7 614 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 CC2D2BQ6DHV5 1058 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 USP17L2Q6R6M4 530 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 USP17L1Q7RTZ2 530 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 FBXO33Q7Z6M2 555 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 NCOA7Q8NI08 942 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 WDR66Q8TBY9 1149 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 FAM84BQ96KN1 310 aaPredicted RBP8.24□□□□□ -1.09
MED28-202ENST00000499786 PUS7LQ9H0K6 701 aaKnown RBP8.24□□□□□ -1.09
MED28-202ENST00000499786 ALDH8A1Q9H2A2 487 aaPredicted RBP8.24□□□□□ -1.09
MED28-202ENST00000499786 NSFL1CQ9UNZ2 370 aaKnown RBP8.24□□□□□ -1.09
MED28-202ENST00000499786 KIF3AQ9Y496 699 aa8.24□□□□□ -1.09
MED28-202ENST00000499786 COL1A1P02452 1464 aaPredicted RBP8.24□□□□□ -1.09
MED28-202ENST00000499786 MYO5AQ9Y4I1 1855 aaKnown RBP8.23□□□□□ -1.09
MED28-202ENST00000499786 COL11A2P13942 1736 aaPredicted RBP8.23□□□□□ -1.09
MED28-202ENST00000499786 TIAM2Q8IVF5 1701 aa8.23□□□□□ -1.09
MED28-202ENST00000499786 CHD4Q14839 1912 aa8.23□□□□□ -1.09
MED28-202ENST00000499786 TCRBV5S4A2TA0A5A2 114 aa8.23□□□□□ -1.09
MED28-202ENST00000499786 E7EWF7 191 aa8.23□□□□□ -1.09
MED28-202ENST00000499786 CAPN5O15484 640 aaPredicted RBP8.23□□□□□ -1.09
MED28-202ENST00000499786 CHGBP05060 677 aa8.23□□□□□ -1.09
MED28-202ENST00000499786 PDIA4P13667 645 aaKnown RBP8.23□□□□□ -1.09
MED28-202ENST00000499786 CPA1P15085 419 aa8.23□□□□□ -1.09
MED28-202ENST00000499786 DDIT3P35638 169 aa8.23□□□□□ -1.09
MED28-202ENST00000499786 USP4Q13107 963 aa8.23□□□□□ -1.09
MED28-202ENST00000499786 CBLBQ13191 982 aa8.23□□□□□ -1.09
MED28-202ENST00000499786 NCOA4Q13772 614 aa8.23□□□□□ -1.09
MED28-202ENST00000499786 C15orf52Q6ZUT6 534 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms