RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 TSC22D4Q9Y3Q8 395 aa4.62□□□□□ -1.67
CALD1-218ENST00000478075 A6NHS1 94 aa4.61□□□□□ -1.67
CALD1-218ENST00000478075 CSRP2Q16527 193 aa4.61□□□□□ -1.67
CALD1-218ENST00000478075 NOM1Q5C9Z4 860 aaKnown RBP4.61□□□□□ -1.67
CALD1-218ENST00000478075 ALKBH2Q6NS38 261 aa4.61□□□□□ -1.67
CALD1-218ENST00000478075 MFSD2AQ8NA29 543 aa4.61□□□□□ -1.67
CALD1-218ENST00000478075 MKNK1Q9BUB5 465 aa4.61□□□□□ -1.67
CALD1-218ENST00000478075 ZFYVE28Q9HCC9 887 aa4.61□□□□□ -1.67
CALD1-218ENST00000478075 CRTAC1Q9NQ79 661 aa4.61□□□□□ -1.67
CALD1-218ENST00000478075 FFAR3O14843 346 aa4.6□□□□□ -1.67
CALD1-218ENST00000478075 SLITRK5O94991 958 aa4.6□□□□□ -1.67
CALD1-218ENST00000478075 CBX7O95931 251 aa4.6□□□□□ -1.67
CALD1-218ENST00000478075 CNR2P34972 360 aa4.6□□□□□ -1.67
CALD1-218ENST00000478075 YBX1P67809 324 aaKnown RBP4.6□□□□□ -1.67
CALD1-218ENST00000478075 SPRED1Q7Z699 444 aa4.6□□□□□ -1.67
CALD1-218ENST00000478075 GALNT12Q8IXK2 581 aa4.6□□□□□ -1.67
CALD1-218ENST00000478075 ZNF747Q9BV97 191 aa4.6□□□□□ -1.67
CALD1-218ENST00000478075 CDR1P51861 262 aa4.59□□□□□ -1.67
CALD1-218ENST00000478075 EGR3Q06889 387 aa4.59□□□□□ -1.67
CALD1-218ENST00000478075 KIAA0319Q5VV43 1072 aa4.59□□□□□ -1.67
CALD1-218ENST00000478075 ZNF507Q8TCN5 953 aa4.59□□□□□ -1.67
CALD1-218ENST00000478075 GPATCH2Q9NW75 528 aa4.59□□□□□ -1.67
CALD1-218ENST00000478075 CXXC1Q9P0U4 656 aaPredicted RBP4.59□□□□□ -1.67
CALD1-218ENST00000478075 DUSP13Q9UII6 198 aa4.59□□□□□ -1.67
CALD1-218ENST00000478075 FOXD3Q9UJU5 478 aaPredicted RBP4.59□□□□□ -1.67
CALD1-218ENST00000478075 TPP2P29144 1249 aaPredicted RBP4.58□□□□□ -1.68
CALD1-218ENST00000478075 GJA9P57773 515 aa4.58□□□□□ -1.68
CALD1-218ENST00000478075 TNK2Q07912 1038 aa4.58□□□□□ -1.68
CALD1-218ENST00000478075 SHISA4Q96DD7 197 aa4.58□□□□□ -1.68
CALD1-218ENST00000478075 ACSBG1Q96GR2 724 aa4.58□□□□□ -1.68
CALD1-218ENST00000478075 MIPEPQ99797 713 aa4.58□□□□□ -1.68
CALD1-218ENST00000478075 EMILIN2Q9BXX0 1053 aa4.58□□□□□ -1.68
CALD1-218ENST00000478075 PPP1R12CQ9BZL4 782 aa4.58□□□□□ -1.68
CALD1-218ENST00000478075 NTF4P34130 210 aa4.57□□□□□ -1.68
CALD1-218ENST00000478075 KLF10Q13118 480 aa4.57□□□□□ -1.68
CALD1-218ENST00000478075 GAB4Q2WGN9 574 aa4.57□□□□□ -1.68
CALD1-218ENST00000478075 PPM1JQ5JR12 505 aa4.57□□□□□ -1.68
CALD1-218ENST00000478075 IGDCC3Q8IVU1 814 aa4.57□□□□□ -1.68
CALD1-218ENST00000478075 HS3ST3A1Q9Y663 406 aa4.57□□□□□ -1.68
CALD1-218ENST00000478075 KRTAP29-1A8MX34 341 aaPredicted RBP4.56□□□□□ -1.68
CALD1-218ENST00000478075 LTKP29376 864 aa4.56□□□□□ -1.68
CALD1-218ENST00000478075 KRTAP10-9P60411 292 aa4.56□□□□□ -1.68
CALD1-218ENST00000478075 ZBTB37Q5TC79 503 aa4.56□□□□□ -1.68
CALD1-218ENST00000478075 LIPIQ6XZB0 460 aa4.56□□□□□ -1.68
CALD1-218ENST00000478075 NLRX1Q86UT6 975 aa4.56□□□□□ -1.68
CALD1-218ENST00000478075 LDHDQ86WU2 507 aa4.56□□□□□ -1.68
CALD1-218ENST00000478075 EHD4Q9H223 541 aa4.56□□□□□ -1.68
CALD1-218ENST00000478075 CAP2P40123 477 aa4.55□□□□□ -1.68
CALD1-218ENST00000478075 FHL2Q14192 279 aa4.55□□□□□ -1.68
CALD1-218ENST00000478075 LETMD1Q6P1Q0 360 aa4.55□□□□□ -1.68
CALD1-218ENST00000478075 PDZD3Q86UT5 571 aa4.55□□□□□ -1.68
CALD1-218ENST00000478075 LNPKQ9C0E8 428 aa4.55□□□□□ -1.68
CALD1-218ENST00000478075 TMEM39AQ9NV64 488 aa4.55□□□□□ -1.68
CALD1-218ENST00000478075 BUB1BO60566 1050 aaPredicted RBP4.54□□□□□ -1.68
CALD1-218ENST00000478075 PLATP00750 562 aa4.54□□□□□ -1.68
CALD1-218ENST00000478075 PFKLP17858 780 aa4.54□□□□□ -1.68
CALD1-218ENST00000478075 RFX1P22670 979 aa4.54□□□□□ -1.68
CALD1-218ENST00000478075 LMOD1P29536 600 aaPredicted RBP4.54□□□□□ -1.68
CALD1-218ENST00000478075 CAPN12Q6ZSI9 719 aa4.54□□□□□ -1.68
CALD1-218ENST00000478075 GLMNQ92990 594 aa4.54□□□□□ -1.68
CALD1-218ENST00000478075 NOVA2Q9UNW9 492 aaKnown RBP4.54□□□□□ -1.68
CALD1-218ENST00000478075 MPOP05164 745 aa4.53□□□□□ -1.68
CALD1-218ENST00000478075 NEFLP07196 543 aa4.53□□□□□ -1.68
CALD1-218ENST00000478075 NANOS3P60323 173 aaKnown RBP4.53□□□□□ -1.68
CALD1-218ENST00000478075 RING1Q06587 406 aa4.53□□□□□ -1.68
CALD1-218ENST00000478075 HELQQ8TDG4 1101 aa4.53□□□□□ -1.68
CALD1-218ENST00000478075 DDX1Q92499 740 aaKnown RBP4.53□□□□□ -1.68
CALD1-218ENST00000478075 SPATA25Q9BR10 227 aa4.53□□□□□ -1.68
CALD1-218ENST00000478075 POLIQ9UNA4 740 aa4.53□□□□□ -1.68
CALD1-218ENST00000478075 POLR3DP05423 398 aaPredicted RBP4.52□□□□□ -1.69
CALD1-218ENST00000478075 MAP1SQ66K74 1059 aaPredicted RBP4.52□□□□□ -1.69
CALD1-218ENST00000478075 PRPF40BQ6NWY9 871 aaKnown RBP4.52□□□□□ -1.69
CALD1-218ENST00000478075 TRAK1Q9UPV9 953 aa4.52□□□□□ -1.69
CALD1-218ENST00000478075 PCDHA5Q9Y5H7 936 aa4.52□□□□□ -1.69
CALD1-218ENST00000478075 NOBOXO60393 691 aa4.51□□□□□ -1.69
CALD1-218ENST00000478075 AMHP03971 560 aa4.51□□□□□ -1.69
CALD1-218ENST00000478075 PNLIPP16233 465 aa4.51□□□□□ -1.69
CALD1-218ENST00000478075 ARNTP27540 789 aa4.51□□□□□ -1.69
CALD1-218ENST00000478075 ETV3P41162 512 aa4.51□□□□□ -1.69
CALD1-218ENST00000478075 EIF1AXP47813 144 aaKnown RBP4.51□□□□□ -1.69
CALD1-218ENST00000478075 MVKQ03426 396 aa4.51□□□□□ -1.69
CALD1-218ENST00000478075 UBE3DQ7Z6J8 389 aa4.51□□□□□ -1.69
CALD1-218ENST00000478075 TSPYL5Q86VY4 417 aaPredicted RBP4.51□□□□□ -1.69
CALD1-218ENST00000478075 SULF2Q8IWU5 870 aa4.51□□□□□ -1.69
CALD1-218ENST00000478075 DNAJC10Q8IXB1 793 aa4.51□□□□□ -1.69
CALD1-218ENST00000478075 GPBAR1Q8TDU6 330 aa4.51□□□□□ -1.69
CALD1-218ENST00000478075 VOPP1Q96AW1 172 aa4.51□□□□□ -1.69
CALD1-218ENST00000478075 GPR62Q9BZJ7 368 aa4.51□□□□□ -1.69
CALD1-218ENST00000478075 DUSP15Q9H1R2 295 aaPredicted RBP4.51□□□□□ -1.69
CALD1-218ENST00000478075 GPN3Q9UHW5 284 aaPredicted RBP4.51□□□□□ -1.69
CALD1-218ENST00000478075 ING1Q9UK53 422 aaPredicted RBP4.51□□□□□ -1.69
CALD1-218ENST00000478075 DUSP10Q9Y6W6 482 aa4.51□□□□□ -1.69
CALD1-218ENST00000478075 LTBP3Q9NS15 1303 aa4.5□□□□□ -1.69
CALD1-218ENST00000478075 SH3D21A4FU49 640 aa4.5□□□□□ -1.69
CALD1-218ENST00000478075 ARL4AP40617 200 aa4.5□□□□□ -1.69
CALD1-218ENST00000478075 ZNF157P51786 506 aaPredicted RBP4.5□□□□□ -1.69
CALD1-218ENST00000478075 ERVFRD-1P60508 538 aa4.5□□□□□ -1.69
CALD1-218ENST00000478075 TARBP2Q15633 366 aaKnown RBP4.5□□□□□ -1.69
CALD1-218ENST00000478075 SLC14A2Q15849 920 aa4.5□□□□□ -1.69
CALD1-218ENST00000478075 BHLHA9Q7RTU4 235 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms