RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 AEBP2Q6ZN18 517 aaPredicted RBP23.77■■□□□ 1.4
CALD1-218ENST00000478075 CHIC1Q5VXU3 224 aa22.55■■□□□ 1.2
CALD1-218ENST00000478075 SENP3Q9H4L4 574 aaPredicted RBP20.76■□□□□ 0.91
CALD1-218ENST00000478075 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
CALD1-218ENST00000478075 POTEDQ86YR6 584 aa19.58■□□□□ 0.72
CALD1-218ENST00000478075 FOXD1Q16676 465 aa19.24■□□□□ 0.67
CALD1-218ENST00000478075 MSH5O43196 834 aa18.63■□□□□ 0.57
CALD1-218ENST00000478075 PIAS4Q8N2W9 510 aaPredicted RBP17.86■□□□□ 0.45
CALD1-218ENST00000478075 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
CALD1-218ENST00000478075 PLPPR3Q6T4P5 718 aa17.14■□□□□ 0.33
CALD1-218ENST00000478075 ADRA2BP18089 450 aa17.08■□□□□ 0.32
CALD1-218ENST00000478075 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
CALD1-218ENST00000478075 DMRT2Q9Y5R5 561 aa16.23■□□□□ 0.19
CALD1-218ENST00000478075 SCAF1Q9H7N4 1312 aaKnown RBP16■□□□□ 0.15
CALD1-218ENST00000478075 MAPK8IP2Q13387 824 aaPredicted RBP15.92■□□□□ 0.14
CALD1-218ENST00000478075 RNF39Q9H2S5 420 aa15.67■□□□□ 0.1
CALD1-218ENST00000478075 DCAF8L1A6NGE4 600 aa15.6■□□□□ 0.09
CALD1-218ENST00000478075 C1QBPQ07021 282 aaKnown RBP15.52■□□□□ 0.08
CALD1-218ENST00000478075 HOXD11P31277 338 aaPredicted RBP15.26■□□□□ 0.03
CALD1-218ENST00000478075 POTEHQ6S545 545 aa15.22■□□□□ 0.03
CALD1-218ENST00000478075 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
CALD1-218ENST00000478075 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
CALD1-218ENST00000478075 CNKSR2Q8WXI2 1034 aa14.83□□□□□ -0.04
CALD1-218ENST00000478075 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
CALD1-218ENST00000478075 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.082e-16■■■■■ 40.8
CALD1-218ENST00000478075 DSG3P32926 999 aa14.32□□□□□ -0.12
CALD1-218ENST00000478075 CAPN15O75808 1086 aa14.23□□□□□ -0.13
CALD1-218ENST00000478075 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
CALD1-218ENST00000478075 SPINK5Q9NQ38 1064 aaPredicted RBP14.06□□□□□ -0.16
CALD1-218ENST00000478075 U3KPZ7 1027 aaPredicted RBP14.04□□□□□ -0.16
CALD1-218ENST00000478075 APLP2Q06481 763 aa13.94□□□□□ -0.18
CALD1-218ENST00000478075 RBM42Q9BTD8 480 aaKnown RBP13.94□□□□□ -0.18
CALD1-218ENST00000478075 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
CALD1-218ENST00000478075 ZNF219Q9P2Y4 722 aaPredicted RBP13.85□□□□□ -0.19
CALD1-218ENST00000478075 CHRDL2Q6WN34 429 aa13.84□□□□□ -0.19
CALD1-218ENST00000478075 TRHP20396 242 aaPredicted RBP13.73□□□□□ -0.21
CALD1-218ENST00000478075 ABCB7O75027 752 aa13.7□□□□□ -0.22
CALD1-218ENST00000478075 NPM3O75607 178 aaKnown RBP13.68□□□□□ -0.22
CALD1-218ENST00000478075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.64□□□□□ -0.23
CALD1-218ENST00000478075 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
CALD1-218ENST00000478075 SAMD1Q6SPF0 538 aaPredicted RBP13.43□□□□□ -0.26
CALD1-218ENST00000478075 HAX1O00165 279 aa13.33□□□□□ -0.28
CALD1-218ENST00000478075 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
CALD1-218ENST00000478075 SLC4A2P04920 1241 aa13.25□□□□□ -0.29
CALD1-218ENST00000478075 PIP4P2Q8N4L2 257 aa13.23□□□□□ -0.29
CALD1-218ENST00000478075 POLA2Q14181 598 aa13.15□□□□□ -0.3
CALD1-218ENST00000478075 REM2Q8IYK8 340 aaPredicted RBP13.08□□□□□ -0.32
CALD1-218ENST00000478075 ZBTB12Q9Y330 459 aaPredicted RBP13.07□□□□□ -0.32
CALD1-218ENST00000478075 FXR2P51116 673 aaKnown RBP eCLIP13.04□□□□□ -0.321e-19■■■■□ 20.6
CALD1-218ENST00000478075 LHX8Q68G74 356 aa12.96□□□□□ -0.33
CALD1-218ENST00000478075 PITPNM1O00562 1244 aa12.92□□□□□ -0.34
CALD1-218ENST00000478075 PLSCR2Q9NRY7 297 aa12.92□□□□□ -0.34
CALD1-218ENST00000478075 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
CALD1-218ENST00000478075 EVX2Q03828 476 aa12.83□□□□□ -0.36
CALD1-218ENST00000478075 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
CALD1-218ENST00000478075 GABBR2O75899 941 aa12.67□□□□□ -0.38
CALD1-218ENST00000478075 C19orf67A6NJJ6 358 aa12.65□□□□□ -0.38
CALD1-218ENST00000478075 PRKAR2AP13861 404 aaKnown RBP12.62□□□□□ -0.39
CALD1-218ENST00000478075 KCNA4P22459 653 aa12.52□□□□□ -0.41
CALD1-218ENST00000478075 SPDYE1Q8NFV5 336 aaPredicted RBP12.51□□□□□ -0.41
CALD1-218ENST00000478075 CLCN6P51797 869 aa12.49□□□□□ -0.41
CALD1-218ENST00000478075 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
CALD1-218ENST00000478075 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
CALD1-218ENST00000478075 SPDYE2Q495Y8 402 aa12.48□□□□□ -0.41
CALD1-218ENST00000478075 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
CALD1-218ENST00000478075 PCDH10Q9P2E7 1040 aa12.33□□□□□ -0.44
CALD1-218ENST00000478075 ATF5Q9Y2D1 282 aaPredicted RBP12.31□□□□□ -0.44
CALD1-218ENST00000478075 POTEIP0CG38 1075 aa12.27□□□□□ -0.45
CALD1-218ENST00000478075 FBLN2P98095 1184 aa12.27□□□□□ -0.45
CALD1-218ENST00000478075 DCBLD2Q96PD2 775 aa12.27□□□□□ -0.45
CALD1-218ENST00000478075 POTEMA6NI47 508 aa12.24□□□□□ -0.45
CALD1-218ENST00000478075 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
CALD1-218ENST00000478075 POTEGQ6S5H5 508 aa12.17□□□□□ -0.46
CALD1-218ENST00000478075 PRR29P0C7W0 189 aa12.14□□□□□ -0.47
CALD1-218ENST00000478075 CHADLQ6NUI6 762 aa12.14□□□□□ -0.47
CALD1-218ENST00000478075 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
CALD1-218ENST00000478075 ZNF692Q9BU19 519 aaPredicted RBP12.1□□□□□ -0.47
CALD1-218ENST00000478075 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
CALD1-218ENST00000478075 OTUD5Q96G74 571 aa12.08□□□□□ -0.48
CALD1-218ENST00000478075 FARP1Q9Y4F1 1045 aaPredicted RBP12□□□□□ -0.49
CALD1-218ENST00000478075 ZNF579Q8NAF0 562 aaKnown RBP11.98□□□□□ -0.49
CALD1-218ENST00000478075 ATXN8OSP0DMR3 200 aa11.97□□□□□ -0.49
CALD1-218ENST00000478075 MAMSTRQ6ZN01 415 aa11.86□□□□□ -0.51
CALD1-218ENST00000478075 ZRANB1Q9UGI0 708 aa11.85□□□□□ -0.51
CALD1-218ENST00000478075 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
CALD1-218ENST00000478075 POTEB2H3BUK9 544 aa11.82□□□□□ -0.52
CALD1-218ENST00000478075 GALR2O43603 387 aaPredicted RBP11.77□□□□□ -0.53
CALD1-218ENST00000478075 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
CALD1-218ENST00000478075 MKRN4PQ13434 485 aaPredicted RBP11.75□□□□□ -0.53
CALD1-218ENST00000478075 SLC4A1APQ9BWU0 796 aaKnown RBP11.75□□□□□ -0.53
CALD1-218ENST00000478075 SCUBE2Q9NQ36 999 aa11.69□□□□□ -0.54
CALD1-218ENST00000478075 C7P10643 843 aa11.68□□□□□ -0.54
CALD1-218ENST00000478075 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
CALD1-218ENST00000478075 SLC39A7Q92504 469 aa11.67□□□□□ -0.54
CALD1-218ENST00000478075 METRNQ9UJH8 293 aa11.65□□□□□ -0.54
CALD1-218ENST00000478075 LCE2DQ5TA82 110 aaPredicted RBP11.59□□□□□ -0.55
CALD1-218ENST00000478075 ASTLQ6HA08 431 aaPredicted RBP11.56□□□□□ -0.56
CALD1-218ENST00000478075 CDAN1Q8IWY9 1227 aa11.55□□□□□ -0.56
CALD1-218ENST00000478075 PELP1Q8IZL8 1130 aaKnown RBP11.55□□□□□ -0.56
CALD1-218ENST00000478075 STAG3Q9UJ98 1225 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms