RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 LRP6O75581 1613 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 H3BQF6 201 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 FIBPO43427 364 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 PYGBP11216 843 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 PRDX5P30044 214 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 HIBADHP31937 336 aaKnown RBP11.25□□□□□ -0.61
NUP50-214ENST00000469163 GBP2P32456 591 aaPredicted RBP11.25□□□□□ -0.61
NUP50-214ENST00000469163 PRR5LQ6MZQ0 368 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 FAM177A1Q8N128 213 aaPredicted RBP11.25□□□□□ -0.61
NUP50-214ENST00000469163 PROM2Q8N271 834 aa11.25□□□□□ -0.61
NUP50-214ENST00000469163 ORC3Q9UBD5 711 aaPredicted RBP11.25□□□□□ -0.61
NUP50-214ENST00000469163 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.25□□□□□ -0.61
NUP50-214ENST00000469163 CHUKO15111 745 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 RPSAP08865 295 aaKnown RBP11.24□□□□□ -0.61
NUP50-214ENST00000469163 NAT1P18440 290 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 INPP5BP32019 993 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 CCDC181Q5TID7 509 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 DPP8Q6V1X1 898 aaPredicted RBP11.24□□□□□ -0.61
NUP50-214ENST00000469163 ILDR1Q86SU0 546 aaPredicted RBP11.24□□□□□ -0.61
NUP50-214ENST00000469163 USP48Q86UV5 1035 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 PIH1D3Q9NQM4 214 aaKnown RBP11.24□□□□□ -0.61
NUP50-214ENST00000469163 ZNF213O14771 459 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 GPAA1O43292 621 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 PPFIA4O75335 1185 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 RAD17O75943 681 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 GYS1P13807 737 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 ACTN3Q08043 901 aaPredicted RBP11.24□□□□□ -0.61
NUP50-214ENST00000469163 MCMDC2Q4G0Z9 681 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 NAA16Q6N069 864 aaPredicted RBP11.24□□□□□ -0.61
NUP50-214ENST00000469163 HOMER1Q86YM7 354 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 ZKSCAN4Q969J2 545 aaPredicted RBP11.24□□□□□ -0.61
NUP50-214ENST00000469163 BICD1Q96G01 975 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 MINPP1Q9UNW1 487 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 NHSL1Q5SYE7 1610 aa11.24□□□□□ -0.61
NUP50-214ENST00000469163 NTSR2O95665 410 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 HSP90B2PQ58FF3 399 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 KIAA1328Q86T90 577 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 NCAPG2Q86XI2 1143 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 TRIM42Q8IWZ5 723 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 ZNF34Q8IZ26 560 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 CCAR2Q8N163 923 aaKnown RBP11.23□□□□□ -0.61
NUP50-214ENST00000469163 OSBP2Q969R2 916 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 CCDC102AQ96A19 550 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 UIMC1Q96RL1 719 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 DNAI1Q9UI46 699 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 DENND2AQ9ULE3 1009 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.23□□□□□ -0.61
NUP50-214ENST00000469163 SMIM22K7EJ46 135 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 ATP8B1O43520 1251 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 SNW1Q13573 536 aaKnown RBP11.23□□□□□ -0.61
NUP50-214ENST00000469163 LAMB3Q13751 1172 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 CREB3L3Q68CJ9 461 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 LPIN2Q92539 896 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 RGPD1P0DJD0 1748 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 H0YIN7 160 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 RFX5P48382 616 aaPredicted RBP11.23□□□□□ -0.61
NUP50-214ENST00000469163 ICA1Q05084 483 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 APOBRQ0VD83 1088 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 SLC5A9Q2M3M2 681 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 CC2D1AQ6P1N0 951 aaPredicted RBP11.23□□□□□ -0.61
NUP50-214ENST00000469163 PDE11AQ9HCR9 933 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 HMG20BQ9P0W2 317 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 MYO6Q9UM54 1294 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 FAN1Q9Y2M0 1017 aa11.23□□□□□ -0.61
NUP50-214ENST00000469163 PHRF1Q9P1Y6 1649 aaKnown RBP11.22□□□□□ -0.61
NUP50-214ENST00000469163 B4E1Z4 1266 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 M0R2C6 588 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 POLR3DP05423 398 aaPredicted RBP11.22□□□□□ -0.61
NUP50-214ENST00000469163 SLURP2P0DP57 97 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 AK2P54819 239 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 THEMIS2Q5TEJ8 643 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 LUZP1Q86V48 1076 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 MAPKAPK5Q8IW41 473 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 TMX3Q96JJ7 454 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 VAT1LQ9HCJ6 419 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 TNS2Q63HR2 1409 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 GOLGA6L4A6NEF3 574 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 ERVV-1B6SEH8 477 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 RNF113AO15541 343 aaKnown RBP11.22□□□□□ -0.61
NUP50-214ENST00000469163 PRPHP41219 470 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 IKQ13123 557 aaPredicted RBP11.22□□□□□ -0.61
NUP50-214ENST00000469163 MYBPC2Q14324 1141 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 KCNB1Q14721 858 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 OTUD7BQ6GQQ9 843 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 ARMC9Q7Z3E5 817 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 B4GALNT2Q8NHY0 566 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 MCM9Q9NXL9 1143 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 STX8Q9UNK0 236 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 FAM196BA6NMK8 535 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 RAB27AP51159 221 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 CNNM3Q8NE01 707 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 ABCC12Q96J65 1359 aa11.22□□□□□ -0.61
NUP50-214ENST00000469163 ELP1O95163 1332 aa11.21□□□□□ -0.61
NUP50-214ENST00000469163 KIF4AO95239 1232 aa11.21□□□□□ -0.61
NUP50-214ENST00000469163 FMNL1O95466 1100 aaPredicted RBP11.21□□□□□ -0.61
NUP50-214ENST00000469163 CD151P48509 253 aa11.21□□□□□ -0.61
NUP50-214ENST00000469163 MFSD14BQ5SR56 506 aa11.21□□□□□ -0.61
NUP50-214ENST00000469163 KBTBD3Q8NAB2 608 aa11.21□□□□□ -0.61
NUP50-214ENST00000469163 IRX2Q9BZI1 471 aaPredicted RBP11.21□□□□□ -0.61
NUP50-214ENST00000469163 TSGA10Q9BZW7 698 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms