RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 SRGAP3O43295 1099 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 PPFIA4O75335 1185 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 CDKL5O76039 1030 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 BRD1O95696 1058 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 RAB27AP51159 221 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 RARSP54136 660 aaKnown RBP4.13□□□□□ -1.75
COL8A1-205ENST00000463753 KCNB1Q14721 858 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 ANO6Q4KMQ2 910 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 DDX46Q7L014 1031 aaKnown RBP4.13□□□□□ -1.75
COL8A1-205ENST00000463753 CHD1LQ86WJ1 897 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 FAM200AQ8TCP9 573 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 SAAL1Q96ER3 474 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 SCLT1Q96NL6 688 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 TSPAN18Q96SJ8 248 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 P2RX7Q99572 595 aaKnown RBP4.13□□□□□ -1.75
COL8A1-205ENST00000463753 IRX2Q9BZI1 471 aaPredicted RBP4.13□□□□□ -1.75
COL8A1-205ENST00000463753 ZCWPW1Q9H0M4 648 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 PRDM9Q9NQV7 894 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 LTN1O94822 1766 aa4.13□□□□□ -1.75
COL8A1-205ENST00000463753 CHUKO15111 745 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 NRDCO43847 1150 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 DTNBO60941 627 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 EIF3JO75822 258 aaKnown RBP4.12□□□□□ -1.75
COL8A1-205ENST00000463753 CAVIN2O95810 425 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 MYBL1P10243 752 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 NEK4P51957 841 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 KCNH2Q12809 1159 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 LAMB3Q13751 1172 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 LONRF2Q1L5Z9 754 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 BMP2KLQ5H9B9 411 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 DRAXINQ8NBI3 349 aaPredicted RBP4.12□□□□□ -1.75
COL8A1-205ENST00000463753 GPKOWQ92917 476 aaPredicted RBP eCLIP4.12□□□□□ -1.75
COL8A1-205ENST00000463753 FUT8Q9BYC5 575 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 YIPF3Q9GZM5 350 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 FAM204AQ9H8W3 233 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 BLOC1S6Q9UL45 172 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.12□□□□□ -1.75
COL8A1-205ENST00000463753 USP16Q9Y5T5 823 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 ELP1O95163 1332 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 TMEM88BA6NKF7 163 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 EBAG9O00559 213 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 ATP8B1O43520 1251 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 RTN2O75298 545 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 CDC45O75419 566 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 CCNYL3P0C7X3 344 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 SCNN1BP51168 640 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 PREPLQ4J6C6 727 aaPredicted RBP4.12□□□□□ -1.75
COL8A1-205ENST00000463753 HSP90AB4PQ58FF6 505 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 CCDC158Q5M9N0 1113 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 DZIP1LQ8IYY4 767 aaKnown RBP4.12□□□□□ -1.75
COL8A1-205ENST00000463753 B4GALNT2Q8NHY0 566 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 FMNL2Q96PY5 1086 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 TSGA10Q9BZW7 698 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 CBX8Q9HC52 389 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.12□□□□□ -1.75
COL8A1-205ENST00000463753 NFAT5O94916 1531 aa4.12□□□□□ -1.75
COL8A1-205ENST00000463753 MON2Q7Z3U7 1717 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 GLTPD2A6NH11 291 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 NAT1P18440 290 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 CDC25CP30307 473 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 BMP8BP34820 402 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 CA8P35219 290 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 GNAI1P63096 354 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 NUCB1Q02818 461 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 APOBRQ0VD83 1088 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 DBN1Q16643 649 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 CEP85LQ5SZL2 805 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 ARMC9Q7Z3E5 817 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 NCAPG2Q86XI2 1143 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 TRIM42Q8IWZ5 723 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 MSL3Q8N5Y2 521 aaKnown RBP4.11□□□□□ -1.75
COL8A1-205ENST00000463753 HELBQ8NG08 1087 aaPredicted RBP4.11□□□□□ -1.75
COL8A1-205ENST00000463753 EZH1Q92800 747 aaPredicted RBP4.11□□□□□ -1.75
COL8A1-205ENST00000463753 BICD1Q96G01 975 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 STK31Q9BXU1 1019 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 PARD6BQ9BYG5 372 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 MCOLN1Q9GZU1 580 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 TMX4Q9H1E5 349 aaPredicted RBP4.11□□□□□ -1.75
COL8A1-205ENST00000463753 L2HGDHQ9H9P8 463 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 SUGCTQ9HAC7 445 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 SAMM50Q9Y512 469 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 TADA3O75528 432 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 RPS6KA5O75582 802 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 KIAA0754O94854 1291 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 EZRP15311 586 aaKnown RBP4.11□□□□□ -1.75
COL8A1-205ENST00000463753 MAGEA8P43361 318 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 MAGEA10P43363 369 aaPredicted RBP4.11□□□□□ -1.75
COL8A1-205ENST00000463753 UBE2HP62256 183 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 ICA1Q05084 483 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 TYRO3Q06418 890 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 SLC5A9Q2M3M2 681 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 HDGFL1Q5TGJ6 251 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 KIAA1328Q86T90 577 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 SLC51AQ86UW1 340 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 PHC3Q8NDX5 983 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 PPP1R13BQ96KQ4 1090 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 FUCA2Q9BTY2 467 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 SRCIN1Q9C0H9 1055 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 MYO6Q9UM54 1294 aa4.11□□□□□ -1.75
COL8A1-205ENST00000463753 PAPPA2Q9BXP8 1791 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms