RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 USP17L21D6R901 530 aa14.61□□□□□ -0.07
VRK3-202ENST00000377011 GPAA1O43292 621 aa14.61□□□□□ -0.07
VRK3-202ENST00000377011 GH2P01242 217 aa14.61□□□□□ -0.07
VRK3-202ENST00000377011 POLR3DP05423 398 aaPredicted RBP14.61□□□□□ -0.07
VRK3-202ENST00000377011 CYP2C8P10632 490 aa14.61□□□□□ -0.07
VRK3-202ENST00000377011 NEK4P51957 841 aa14.61□□□□□ -0.07
VRK3-202ENST00000377011 CTR9Q6PD62 1173 aa14.61□□□□□ -0.07
VRK3-202ENST00000377011 PRRT2Q7Z6L0 340 aaPredicted RBP14.61□□□□□ -0.07
VRK3-202ENST00000377011 CLEC10AQ8IUN9 316 aa14.61□□□□□ -0.07
VRK3-202ENST00000377011 TRIM44Q96DX7 344 aaPredicted RBP14.61□□□□□ -0.07
VRK3-202ENST00000377011 TMX3Q96JJ7 454 aa14.61□□□□□ -0.07
VRK3-202ENST00000377011 FAM227BQ96M60 508 aa14.61□□□□□ -0.07
VRK3-202ENST00000377011 MCOLN1Q9GZU1 580 aa14.61□□□□□ -0.07
VRK3-202ENST00000377011 SERPINB13Q9UIV8 391 aa14.61□□□□□ -0.07
VRK3-202ENST00000377011 ZBTB21Q9ULJ3 1066 aa14.61□□□□□ -0.07
VRK3-202ENST00000377011 ESPNB1AK53 854 aa14.6□□□□□ -0.07
VRK3-202ENST00000377011 PDHXO00330 501 aa14.6□□□□□ -0.07
VRK3-202ENST00000377011 PEX10O60683 326 aa14.6□□□□□ -0.07
VRK3-202ENST00000377011 CAPN15O75808 1086 aa14.6□□□□□ -0.07
VRK3-202ENST00000377011 MBD3O95983 291 aa14.6□□□□□ -0.07
VRK3-202ENST00000377011 HLA-DOAP06340 250 aa14.6□□□□□ -0.07
VRK3-202ENST00000377011 CTGFP29279 349 aa14.6□□□□□ -0.07
VRK3-202ENST00000377011 TAF1CQ15572 869 aaPredicted RBP14.6□□□□□ -0.07
VRK3-202ENST00000377011 ZMYM1Q5SVZ6 1142 aa14.6□□□□□ -0.07
VRK3-202ENST00000377011 TMED8Q6PL24 325 aaPredicted RBP14.6□□□□□ -0.07
VRK3-202ENST00000377011 ARHGAP39Q9C0H5 1083 aa14.6□□□□□ -0.07
VRK3-202ENST00000377011 TRIM6-TRIM34B2RNG4 842 aa14.59□□□□□ -0.07
VRK3-202ENST00000377011 NASPP49321 788 aaPredicted RBP14.59□□□□□ -0.07
VRK3-202ENST00000377011 HMGCS2P54868 508 aa14.59□□□□□ -0.07
VRK3-202ENST00000377011 VPS53Q5VIR6 699 aa14.59□□□□□ -0.07
VRK3-202ENST00000377011 EHD4Q9H223 541 aa14.59□□□□□ -0.07
VRK3-202ENST00000377011 ZDHHC9Q9Y397 364 aa14.59□□□□□ -0.07
VRK3-202ENST00000377011 ADGRA2Q96PE1 1338 aa14.59□□□□□ -0.07
VRK3-202ENST00000377011 LOC285556D6RIA3 1793 aa14.58□□□□□ -0.07
VRK3-202ENST00000377011 A0A0D9SFI3 127 aa14.58□□□□□ -0.07
VRK3-202ENST00000377011 CXCL11O14625 94 aa14.58□□□□□ -0.07
VRK3-202ENST00000377011 BRD1O95696 1058 aa14.58□□□□□ -0.07
VRK3-202ENST00000377011 HSPA4P34932 840 aa14.58□□□□□ -0.07
VRK3-202ENST00000377011 C12orf60Q5U649 245 aa14.58□□□□□ -0.07
VRK3-202ENST00000377011 ZSCAN25Q6NSZ9 544 aa14.58□□□□□ -0.07
VRK3-202ENST00000377011 GADL1Q6ZQY3 521 aa14.58□□□□□ -0.07
VRK3-202ENST00000377011 CD99L2Q8TCZ2 262 aa14.58□□□□□ -0.07
VRK3-202ENST00000377011 ACER1Q8TDN7 264 aa14.58□□□□□ -0.07
VRK3-202ENST00000377011 ANO2Q9NQ90 1003 aa14.58□□□□□ -0.07
VRK3-202ENST00000377011 CPA4Q9UI42 421 aa14.58□□□□□ -0.07
VRK3-202ENST00000377011 TACC3Q9Y6A5 838 aa14.58□□□□□ -0.07
VRK3-202ENST00000377011 MKI67P46013 3256 aaKnown RBP14.58□□□□□ -0.08
VRK3-202ENST00000377011 USP17L5A8MUK1 530 aa14.58□□□□□ -0.08
VRK3-202ENST00000377011 ALDH1A1P00352 501 aa14.58□□□□□ -0.08
VRK3-202ENST00000377011 MTMR2Q13614 643 aa14.58□□□□□ -0.08
VRK3-202ENST00000377011 TTC6Q86TZ1 520 aa14.58□□□□□ -0.08
VRK3-202ENST00000377011 CERS3Q8IU89 383 aa14.58□□□□□ -0.08
VRK3-202ENST00000377011 ZNF280CQ8ND82 737 aa14.58□□□□□ -0.08
VRK3-202ENST00000377011 RILPL2Q969X0 211 aa14.58□□□□□ -0.08
VRK3-202ENST00000377011 IL25Q9H293 177 aa14.58□□□□□ -0.08
VRK3-202ENST00000377011 ATP8A2Q9NTI2 1148 aa14.58□□□□□ -0.08
VRK3-202ENST00000377011 MYH8P13535 1937 aa14.57□□□□□ -0.08
VRK3-202ENST00000377011 AKR1B1P15121 316 aa14.57□□□□□ -0.08
VRK3-202ENST00000377011 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
VRK3-202ENST00000377011 SEPT2Q15019 361 aa14.57□□□□□ -0.08
VRK3-202ENST00000377011 ZSCAN23Q3MJ62 389 aa14.57□□□□□ -0.08
VRK3-202ENST00000377011 CERKLQ49MI3 558 aaPredicted RBP14.57□□□□□ -0.08
VRK3-202ENST00000377011 HS1BP3Q53T59 392 aa14.57□□□□□ -0.08
VRK3-202ENST00000377011 POTEEQ6S8J3 1075 aa14.57□□□□□ -0.08
VRK3-202ENST00000377011 ANKRD23Q86SG2 305 aa14.57□□□□□ -0.08
VRK3-202ENST00000377011 ZNF589Q86UQ0 364 aaPredicted RBP14.57□□□□□ -0.08
VRK3-202ENST00000377011 SIAH1Q8IUQ4 282 aa14.57□□□□□ -0.08
VRK3-202ENST00000377011 TRIM34Q9BYJ4 488 aa14.57□□□□□ -0.08
VRK3-202ENST00000377011 INCENPQ9NQS7 918 aa14.57□□□□□ -0.08
VRK3-202ENST00000377011 RAD50Q92878 1312 aa14.57□□□□□ -0.08
VRK3-202ENST00000377011 A0A1W2PRG0 241 aa14.56□□□□□ -0.08
VRK3-202ENST00000377011 FKTNO75072 461 aa14.56□□□□□ -0.08
VRK3-202ENST00000377011 NMIQ13287 307 aaPredicted RBP14.56□□□□□ -0.08
VRK3-202ENST00000377011 ZYXQ15942 572 aaKnown RBP14.56□□□□□ -0.08
VRK3-202ENST00000377011 KIAA1755Q5JYT7 1200 aa14.56□□□□□ -0.08
VRK3-202ENST00000377011 EVI5LQ96CN4 794 aa14.56□□□□□ -0.08
VRK3-202ENST00000377011 ABHD8Q96I13 439 aa14.56□□□□□ -0.08
VRK3-202ENST00000377011 SGSM2O43147 1006 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 TLR2O60603 784 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 ZFYP08048 801 aaPredicted RBP14.55□□□□□ -0.08
VRK3-202ENST00000377011 ASNSP08243 561 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 CDK8P49336 464 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 PKP1Q13835 747 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 IFFO2Q5TF58 517 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 OTUD7BQ6GQQ9 843 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 C17orf99Q6UX52 265 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 NKX2-3Q8TAU0 364 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 WDR18Q9BV38 432 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.55□□□□□ -0.08
VRK3-202ENST00000377011 EMILIN3Q9NT22 766 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 MINDY4BA8MYZ0 360 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 ABCB5Q2M3G0 1257 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 NOM1Q5C9Z4 860 aaKnown RBP14.55□□□□□ -0.08
VRK3-202ENST00000377011 CAVIN1Q6NZI2 390 aaKnown RBP14.55□□□□□ -0.08
VRK3-202ENST00000377011 IFNL3Q8IZI9 196 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 ZFYVE28Q9HCC9 887 aa14.55□□□□□ -0.08
VRK3-202ENST00000377011 PRDM1O75626 825 aa14.54□□□□□ -0.08
VRK3-202ENST00000377011 BACE1P56817 501 aa14.54□□□□□ -0.08
VRK3-202ENST00000377011 SP3Q02447 781 aa14.54□□□□□ -0.08
VRK3-202ENST00000377011 SH3D19Q5HYK7 790 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms