RNA–Protein interactions for RNA: ENST00000373833.10

RCC1-203, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-203ENST00000373833 NMRK2Q9NPI5 230 aa12.18□□□□□ -0.46
RCC1-203ENST00000373833 ZNF70Q9UC06 446 aaPredicted RBP12.18□□□□□ -0.46
RCC1-203ENST00000373833 BRCA1P38398 1863 aaKnown RBP12.18□□□□□ -0.46
RCC1-203ENST00000373833 VPS37CA5D8V6 355 aaPredicted RBP12.18□□□□□ -0.46
RCC1-203ENST00000373833 TRAF5O00463 557 aa12.18□□□□□ -0.46
RCC1-203ENST00000373833 LDHCP07864 332 aa12.18□□□□□ -0.46
RCC1-203ENST00000373833 ZSWIM6Q9HCJ5 1215 aa12.18□□□□□ -0.46
RCC1-203ENST00000373833 FZD9O00144 591 aa12.17□□□□□ -0.46
RCC1-203ENST00000373833 PEX10O60683 326 aa12.17□□□□□ -0.46
RCC1-203ENST00000373833 IRX5P78411 483 aaPredicted RBP12.17□□□□□ -0.46
RCC1-203ENST00000373833 NCOA7Q8NI08 942 aa12.17□□□□□ -0.46
RCC1-203ENST00000373833 TTC14Q96N46 770 aa12.17□□□□□ -0.46
RCC1-203ENST00000373833 RBAK-RBAKDNI3L0D1 243 aa12.17□□□□□ -0.46
RCC1-203ENST00000373833 CDK8P49336 464 aa12.17□□□□□ -0.46
RCC1-203ENST00000373833 GSTO1P78417 241 aa12.17□□□□□ -0.46
RCC1-203ENST00000373833 KIF4BQ2VIQ3 1234 aa12.17□□□□□ -0.46
RCC1-203ENST00000373833 C12orf60Q5U649 245 aa12.17□□□□□ -0.46
RCC1-203ENST00000373833 MYRIPQ8NFW9 859 aa12.17□□□□□ -0.46
RCC1-203ENST00000373833 ZKSCAN4Q969J2 545 aaPredicted RBP12.17□□□□□ -0.46
RCC1-203ENST00000373833 NUP88Q99567 741 aaPredicted RBP12.17□□□□□ -0.46
RCC1-203ENST00000373833 MKRN1Q9UHC7 482 aaKnown RBP12.17□□□□□ -0.46
RCC1-203ENST00000373833 FER1L6Q2WGJ9 1857 aa12.17□□□□□ -0.46
RCC1-203ENST00000373833 GOLGA8BA8MQT2 603 aa12.16□□□□□ -0.46
RCC1-203ENST00000373833 MCM5P33992 734 aa12.16□□□□□ -0.46
RCC1-203ENST00000373833 DHX32Q7L7V1 743 aaKnown RBP12.16□□□□□ -0.46
RCC1-203ENST00000373833 UIMC1Q96RL1 719 aa12.16□□□□□ -0.46
RCC1-203ENST00000373833 TTC12Q9H892 705 aaPredicted RBP12.16□□□□□ -0.46
RCC1-203ENST00000373833 RRAGCQ9HB90 399 aa12.16□□□□□ -0.46
RCC1-203ENST00000373833 TNKSO95271 1327 aa12.16□□□□□ -0.46
RCC1-203ENST00000373833 TSPY3P0CV98 308 aa12.16□□□□□ -0.46
RCC1-203ENST00000373833 TSPY8P0CW00 308 aa12.16□□□□□ -0.46
RCC1-203ENST00000373833 MB21D2Q8IYB1 491 aaPredicted RBP12.16□□□□□ -0.46
RCC1-203ENST00000373833 ZDHHC15Q96MV8 337 aa12.16□□□□□ -0.46
RCC1-203ENST00000373833 OSBPL5Q9H0X9 879 aaPredicted RBP12.16□□□□□ -0.46
RCC1-203ENST00000373833 IL17RBQ9NRM6 502 aa12.16□□□□□ -0.46
RCC1-203ENST00000373833 CTNNA3Q9UI47 895 aa12.16□□□□□ -0.46
RCC1-203ENST00000373833 FRMPD2Q68DX3 1309 aaPredicted RBP12.16□□□□□ -0.46
RCC1-203ENST00000373833 KIF20AO95235 890 aa12.15□□□□□ -0.46
RCC1-203ENST00000373833 U2AF2P26368 475 aaKnown RBP eCLIP12.15□□□□□ -0.462e-12■■□□□ 11.6
RCC1-203ENST00000373833 CDC27P30260 824 aa12.15□□□□□ -0.46
RCC1-203ENST00000373833 SCRN1Q12765 414 aa12.15□□□□□ -0.46
RCC1-203ENST00000373833 GAKO14976 1311 aa12.15□□□□□ -0.46
RCC1-203ENST00000373833 SALL1Q9NSC2 1324 aa12.15□□□□□ -0.46
RCC1-203ENST00000373833 SOGA3Q5TF21 947 aa12.15□□□□□ -0.46
RCC1-203ENST00000373833 ZNF444Q8N0Y2 327 aaPredicted RBP12.15□□□□□ -0.46
RCC1-203ENST00000373833 ENAHQ8N8S7 591 aaPredicted RBP12.15□□□□□ -0.46
RCC1-203ENST00000373833 UBAC1Q9BSL1 405 aa12.15□□□□□ -0.46
RCC1-203ENST00000373833 DEFB129Q9H1M3 183 aa12.15□□□□□ -0.46
RCC1-203ENST00000373833 HDAC9Q9UKV0 1011 aa12.15□□□□□ -0.46
RCC1-203ENST00000373833 H7C1D1 291 aa12.15□□□□□ -0.47
RCC1-203ENST00000373833 INPP5BP32019 993 aa12.15□□□□□ -0.47
RCC1-203ENST00000373833 ECE1P42892 770 aa12.15□□□□□ -0.47
RCC1-203ENST00000373833 SEPT2Q15019 361 aa12.15□□□□□ -0.47
RCC1-203ENST00000373833 NBPF11Q86T75 865 aa12.15□□□□□ -0.47
RCC1-203ENST00000373833 CEP95Q96GE4 821 aa12.15□□□□□ -0.47
RCC1-203ENST00000373833 UBA5Q9GZZ9 404 aa12.15□□□□□ -0.47
RCC1-203ENST00000373833 GPRC5DQ9NZD1 345 aa12.15□□□□□ -0.47
RCC1-203ENST00000373833 SMC3Q9UQE7 1217 aa12.15□□□□□ -0.47
RCC1-203ENST00000373833 DOCK2Q92608 1830 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 KIF13BQ9NQT8 1826 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 FIBPO43427 364 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 SLC16A2P36021 539 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 TNIP1Q15025 636 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 USP17L2Q6R6M4 530 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 STAG2Q8N3U4 1231 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 GH2P01242 217 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 RASA1P20936 1047 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 CEBPZQ03701 1054 aaKnown RBP12.14□□□□□ -0.47
RCC1-203ENST00000373833 HOMER1Q86YM7 354 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 TRERF1Q96PN7 1200 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 TRIM34Q9BYJ4 488 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 CLIP2Q9UDT6 1046 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 USP25Q9UHP3 1055 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 SERPINB13Q9UIV8 391 aa12.14□□□□□ -0.47
RCC1-203ENST00000373833 GADD45BO75293 160 aaPredicted RBP12.13□□□□□ -0.47
RCC1-203ENST00000373833 GUCY1A2P33402 732 aa12.13□□□□□ -0.47
RCC1-203ENST00000373833 NOLC1Q14978 699 aaKnown RBP eCLIP12.13□□□□□ -0.473e-26■■□□□ 13.5
RCC1-203ENST00000373833 HHIPL2Q6UWX4 724 aa12.13□□□□□ -0.47
RCC1-203ENST00000373833 GTPBP4Q9BZE4 634 aaKnown RBP12.13□□□□□ -0.47
RCC1-203ENST00000373833 TSPY26PQ9H489 355 aa12.13□□□□□ -0.47
RCC1-203ENST00000373833 ATP8A2Q9NTI2 1148 aa12.13□□□□□ -0.47
RCC1-203ENST00000373833 LAMA4Q16363 1823 aa12.13□□□□□ -0.47
RCC1-203ENST00000373833 SBF1O95248 1867 aa12.13□□□□□ -0.47
RCC1-203ENST00000373833 RPAP1Q9BWH6 1393 aaPredicted RBP12.13□□□□□ -0.47
RCC1-203ENST00000373833 PLEKHA8P1O95397 391 aa12.13□□□□□ -0.47
RCC1-203ENST00000373833 PPP4CP60510 307 aa12.13□□□□□ -0.47
RCC1-203ENST00000373833 EXOSC10Q01780 885 aaKnown RBP12.13□□□□□ -0.47
RCC1-203ENST00000373833 USP48Q86UV5 1035 aa12.13□□□□□ -0.47
RCC1-203ENST00000373833 ACER1Q8TDN7 264 aa12.13□□□□□ -0.47
RCC1-203ENST00000373833 SERPINA10Q9UK55 444 aa12.13□□□□□ -0.47
RCC1-203ENST00000373833 LIMCH1Q9UPQ0 1083 aa12.13□□□□□ -0.47
RCC1-203ENST00000373833 SMCHD1A6NHR9 2005 aa12.12□□□□□ -0.47
RCC1-203ENST00000373833 LETM1O95202 739 aaPredicted RBP12.12□□□□□ -0.47
RCC1-203ENST00000373833 GNAT2P19087 354 aa12.12□□□□□ -0.47
RCC1-203ENST00000373833 PSMA5P28066 241 aa12.12□□□□□ -0.47
RCC1-203ENST00000373833 GJB2P29033 226 aa12.12□□□□□ -0.47
RCC1-203ENST00000373833 PDIA3P30101 505 aaKnown RBP12.12□□□□□ -0.47
RCC1-203ENST00000373833 TTLL12Q14166 644 aaPredicted RBP12.12□□□□□ -0.47
RCC1-203ENST00000373833 KCTD1Q719H9 257 aa12.12□□□□□ -0.47
RCC1-203ENST00000373833 IGDCC4Q8TDY8 1250 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms