RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 LARGE2Q8N3Y3 721 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 TIGD1Q96MW7 591 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 COA1Q9GZY4 146 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 IMPACTQ9P2X3 320 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 SWAP70Q9UH65 585 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 BCL9O00512 1426 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 TNS2Q63HR2 1409 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 STK36Q9NRP7 1315 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 BTBD18B2RXH4 712 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 USO1O60763 962 aaKnown RBP6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 NTSR2O95665 410 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 SLC1A4P43007 532 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 ZNF75DP51815 510 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 CASP7P55210 303 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 SCARF1Q14162 830 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 REXO1Q8N1G1 1221 aaKnown RBP6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 TRIML1Q8N9V2 468 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 CELF1Q92879 486 aaKnown RBP6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 GPCPD1Q9NPB8 672 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 ABCC6O95255 1503 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 NALCNQ8IZF0 1738 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 CASQ1P31415 396 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 EXOSC10Q01780 885 aaKnown RBP6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 ITPK1Q13572 414 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 DGKHQ86XP1 1220 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 CPLX3Q8WVH0 158 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 HOOK2Q96ED9 719 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 TRMT1Q9NXH9 659 aaKnown RBP6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 MYO6Q9UM54 1294 aa6.01□□□□□ -1.45
SMNDC1-202ENST00000369603 DLG5Q8TDM6 1919 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 KLRF2D3W0D1 207 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 PPIP5K2O43314 1243 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 PRPF3O43395 683 aaKnown RBP6□□□□□ -1.45
SMNDC1-202ENST00000369603 PTGS1P23219 599 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 CETN1Q12798 172 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 MAPK8IP2Q13387 824 aaPredicted RBP6□□□□□ -1.45
SMNDC1-202ENST00000369603 CCDC181Q5TID7 509 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 CEP135Q66GS9 1140 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 SV2BQ7L1I2 683 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 SGMS1Q86VZ5 419 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 C17orf53Q8N3J3 647 aaPredicted RBP6□□□□□ -1.45
SMNDC1-202ENST00000369603 LINC00301Q8NCQ3 95 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 MYRIPQ8NFW9 859 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 TSC1Q92574 1164 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 RUFY1Q96T51 708 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 ZDHHC9Q9Y397 364 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 LTN1O94822 1766 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 MMP1P03956 469 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 DLGAP5Q15398 846 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 TMEM132AQ24JP5 1023 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 INTS5Q6P9B9 1019 aaKnown RBP6□□□□□ -1.45
SMNDC1-202ENST00000369603 TBC1D10CQ8IV04 446 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 EHBP1Q8NDI1 1231 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 GNL3Q9BVP2 549 aaKnown RBP eCLIP6□□□□□ -1.45
SMNDC1-202ENST00000369603 UBA5Q9GZZ9 404 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 SETD1AO15047 1707 aaKnown RBP6□□□□□ -1.45
SMNDC1-202ENST00000369603 ADAMTSL3P82987 1691 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 RGPD8O14715 1765 aaPredicted RBP6□□□□□ -1.45
SMNDC1-202ENST00000369603 hCG_1984214I3L0E3 225 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 CCNT1O60563 726 aaKnown RBP6□□□□□ -1.45
SMNDC1-202ENST00000369603 URI1O94763 535 aaPredicted RBP6□□□□□ -1.45
SMNDC1-202ENST00000369603 TRIM21P19474 475 aaKnown RBP6□□□□□ -1.45
SMNDC1-202ENST00000369603 HAUS3Q68CZ6 603 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 NIM1KQ8IY84 436 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 ZNF713Q8N859 430 aaPredicted RBP6□□□□□ -1.45
SMNDC1-202ENST00000369603 CERKQ8TCT0 537 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 CHAMP1Q96JM3 812 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 FAM84BQ96KN1 310 aaPredicted RBP6□□□□□ -1.45
SMNDC1-202ENST00000369603 CLIC4Q9Y696 253 aa6□□□□□ -1.45
SMNDC1-202ENST00000369603 SMCO2A6NFE2 343 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 GSG1L2A8MUP6 293 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 LAD1O00515 517 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 KIF4BQ2VIQ3 1234 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 SLFNL1Q499Z3 407 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 ASPRV1Q53RT3 343 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 GPATCH4Q5T3I0 446 aaKnown RBP5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 PPP4R3AQ6IN85 833 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 CNNM4Q6P4Q7 775 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 KRBA2Q6ZNG9 492 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 LINC00116Q8NCU8 138 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 MASTLQ96GX5 879 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 MPHOSPH6Q99547 160 aaKnown RBP5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 ZNF142P52746 1687 aaPredicted RBP5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 CYLC1P35663 651 aaPredicted RBP5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 FANCCQ00597 558 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 TRIM14Q14142 442 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 NFIXQ14938 502 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 ODF2Q5BJF6 829 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 CNGA4Q8IV77 575 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 GBP3Q9H0R5 595 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 DHX36Q9H2U1 1008 aaKnown RBP5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 hCG_1642624A0A1W2PR95 340 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 DCAF8L1A6NGE4 600 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 SNAP23O00161 211 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 DDIT3P35638 169 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 NDUFA8P51970 172 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 EIF6P56537 245 aaKnown RBP5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 JAKMIP3Q5VZ66 844 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 STOX1Q6ZVD7 989 aa5.99□□□□□ -1.45
SMNDC1-202ENST00000369603 CCDC65Q8IXS2 484 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms