RNA–Protein interactions for RNA: ENST00000239450.4

PCDHB12-201, Transcript of protocadherin beta 12, humanhuman

APPRIS P1 BASIC

Gene PCDHB12, Length 3,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-201ENST00000239450 FAM205CA6NFA0 338 aa13.4□□□□□ -0.26
PCDHB12-201ENST00000239450 PARP1P09874 1014 aaKnown RBP13.4□□□□□ -0.26
PCDHB12-201ENST00000239450 DPEP1P16444 411 aa13.4□□□□□ -0.26
PCDHB12-201ENST00000239450 KRT2P35908 639 aa13.4□□□□□ -0.26
PCDHB12-201ENST00000239450 CRKP46108 304 aa13.4□□□□□ -0.26
PCDHB12-201ENST00000239450 NFIAQ12857 509 aa13.4□□□□□ -0.26
PCDHB12-201ENST00000239450 ZNF592Q92610 1267 aa13.4□□□□□ -0.26
PCDHB12-201ENST00000239450 MIGA2Q7L4E1 593 aa13.4□□□□□ -0.26
PCDHB12-201ENST00000239450 TRMT1LQ7Z2T5 733 aaKnown RBP13.4□□□□□ -0.26
PCDHB12-201ENST00000239450 A0A0U1RQG5 324 aaPredicted RBP13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 VWA3AA6NCI4 1184 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 KLRF2D3W0D1 207 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 CALM1P0DP23 149 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 CALM2P0DP24 149 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 CALM3P0DP25 149 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 FAM160A1Q05DH4 1040 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 C12orf60Q5U649 245 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 JAKMIP3Q5VZ66 844 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 ALDH8A1Q9H2A2 487 aaPredicted RBP13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 IFNAR1P17181 557 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 NIM1KQ8IY84 436 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 DHX58Q96C10 678 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 CEP131Q9UPN4 1083 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 FLT1P17948 1338 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 TRIM75PA6NK02 468 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 CTAGE5O15320 804 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 FMNL1O95466 1100 aaPredicted RBP13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 SERPINC1P01008 464 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 NDUFA8P51970 172 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 SNAP25P60880 206 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 DLGAP5Q15398 846 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 STX1AQ16623 288 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 KCTD1Q719H9 257 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 CEP95Q96GE4 821 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 FEZ1Q99689 392 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 CLSTN2Q9H4D0 955 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 SERPINB13Q9UIV8 391 aa13.39□□□□□ -0.27
PCDHB12-201ENST00000239450 NOSTRINQ8IVI9 506 aa13.38□□□□□ -0.27
PCDHB12-201ENST00000239450 AKT1S1Q96B36 256 aa13.38□□□□□ -0.27
PCDHB12-201ENST00000239450 COL1A1P02452 1464 aaPredicted RBP13.38□□□□□ -0.27
PCDHB12-201ENST00000239450 CRY2Q49AN0 593 aa13.38□□□□□ -0.27
PCDHB12-201ENST00000239450 AOPEPQ8N6M6 819 aa13.38□□□□□ -0.27
PCDHB12-201ENST00000239450 HDAC9Q9UKV0 1011 aa13.38□□□□□ -0.27
PCDHB12-201ENST00000239450 BTAF1O14981 1849 aa13.38□□□□□ -0.27
PCDHB12-201ENST00000239450 TJP1Q07157 1748 aa13.38□□□□□ -0.27
PCDHB12-201ENST00000239450 SSBP05455 408 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCDHB12-201ENST00000239450 CDC25AP30304 524 aa13.38□□□□□ -0.27
PCDHB12-201ENST00000239450 TICAM2Q86XR7 235 aa13.38□□□□□ -0.27
PCDHB12-201ENST00000239450 CERS5Q8N5B7 392 aa13.38□□□□□ -0.27
PCDHB12-201ENST00000239450 RBM28Q9NW13 759 aaKnown RBP13.38□□□□□ -0.27
PCDHB12-201ENST00000239450 TNNI2P48788 182 aa13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 LETM2Q2VYF4 491 aa13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 TMEM47Q9BQJ4 181 aa13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 AKR1B1P15121 316 aa13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 TXLNAP40222 546 aa13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 TMC4Q7Z404 712 aa13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 SGMS1Q86VZ5 419 aa13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 RTFDC1Q9BY42 306 aaPredicted RBP13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 PCDHB6Q9Y5E3 794 aa13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 NUP188Q5SRE5 1749 aa13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 ZNF202O95125 648 aa13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 CFAP100Q494V2 611 aa13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 CSRNP1Q96S65 589 aa13.37□□□□□ -0.27
PCDHB12-201ENST00000239450 NRAPQ86VF7 1730 aa13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 USH1GQ495M9 461 aa13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 SRBD1Q8N5C6 995 aaKnown RBP13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 RRP36Q96EU6 259 aaKnown RBP13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 HOXA10P31260 410 aaPredicted RBP13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 CCDC93Q567U6 631 aa13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 CDC42EP5Q6NZY7 148 aa13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 PODNQ7Z5L7 613 aa13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 GOLPH3LQ9H4A5 285 aa13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 CBX8Q9HC52 389 aa13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 POLR2DO15514 142 aaKnown RBP13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 MYO1BO43795 1136 aa13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 SCG2P13521 617 aa13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 KRI1Q8N9T8 703 aaKnown RBP13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 TMEM87AQ8NBN3 555 aa13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 LINC00301Q8NCQ3 95 aa13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 BIN2Q9UBW5 565 aaPredicted RBP13.36□□□□□ -0.27
PCDHB12-201ENST00000239450 USP17L5A8MUK1 530 aa13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 PFKFB1P16118 471 aa13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 LMOD1P29536 600 aaPredicted RBP13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 CERKLQ49MI3 558 aaPredicted RBP13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 ZFPM1Q8IX07 1006 aa13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 COA7Q96BR5 231 aa13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 RCOR1Q9UKL0 485 aa13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 NWD2Q9ULI1 1742 aa13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 VEGFAP15692 232 aaPredicted RBP13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 SLC1A4P43007 532 aa13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 INF2Q27J81 1249 aa13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 ATL3Q6DD88 541 aa13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 ADALQ6DHV7 355 aa13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 NBPF11Q86T75 865 aa13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 CCDC84Q86UT8 332 aaPredicted RBP13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 AGXT2Q9BYV1 514 aa13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 DDX4Q9NQI0 724 aaKnown RBP13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 ELP1O95163 1332 aa13.35□□□□□ -0.27
PCDHB12-201ENST00000239450 MMP1P03956 469 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms