RNA–Protein interactions for RNA: ENSMUST00000041010.14

Ccdc9-201, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-201ENSMUST00000041010 Mrps31Q61733 384 aaKnown RBP24.54■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Fam160b2Q80YR2 744 aa24.54■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Riok1Q922Q2 567 aa24.54■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Arid4aF8VPQ2 1261 aaKnown RBP24.54■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Sox5P35710 763 aa24.54■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Hand2Q61039 217 aa24.54■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Trim56Q80VI1 734 aaKnown RBP24.54■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Eif3cQ8R1B4 911 aaKnown RBP24.54■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Vmn1r218Q8R261 298 aa24.54■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 NenfQ9CQ45 171 aa24.54■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Mfap3lQ9D3X9 409 aa24.54■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Phrf1A6H619 1682 aa24.53■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Akap2O54931 893 aa24.53■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Pbx1P41778 430 aa24.53■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Cct6bQ61390 531 aa24.53■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Anks1bQ8BIZ1 1259 aa24.53■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 TnksQ6PFX9 1320 aa24.53■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Rexo5D3YW29 759 aa24.53■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Ift88Q61371 824 aa24.53■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Znf609Q8BZ47 1413 aa24.53■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Clec16aQ80U30 1036 aa24.52■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Usp27Q8CEG8 438 aa24.52■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Cyp3a57D3YYZ0 503 aa24.52■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Ankrd13dQ6PD24 605 aa24.52■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Ccdc38Q8CDN8 563 aa24.52■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 Sf3b3Q921M3 1217 aaKnown RBP24.52■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 AdarQ99MU3 1178 aaKnown RBP24.52■■□□□ 1.52
Ccdc9-201ENSMUST00000041010 SsbP32067 415 aaKnown RBP24.51■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Sept1P42209 366 aa24.51■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Cd37Q61470 281 aa24.51■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Calcoco1Q8CGU1 691 aa24.51■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Mis12Q9CY25 206 aa24.51■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Uchl5Q9WUP7 329 aa24.51■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Dnm1P39053 867 aa24.51■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Trim11Q99PQ2 467 aa24.51■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 SelenooQ9DBC0 667 aa24.51■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Slc5a4aQ9ET37 656 aa24.51■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Znfx1Q8R151 1909 aaKnown RBP24.51■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Ube4aE9Q735 1028 aa24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Wee1P47810 646 aa24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Krt86P97861 486 aa24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Top1Q04750 767 aaKnown RBP24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Erlin2Q8BFZ9 340 aa24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 RarsQ9D0I9 660 aaKnown RBP24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Setdb1O88974 1307 aa24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 NpcdF8VQB8 469 aa24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Speer4dL7N216 212 aa24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Nkx2-5P42582 318 aa24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Znf653Q6YND2 615 aa24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Tcp11l2Q8K1H7 517 aa24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Mrps25Q9D125 171 aaKnown RBP24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Hsd3b7Q9EQC1 369 aa24.5■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Sdc2P43407 202 aa24.49■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Srp68Q8BMA6 625 aaKnown RBP24.49■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 ImmtQ8CAQ8 757 aaKnown RBP24.49■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Acad12D3Z7X0 555 aa24.49■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Ankrd35E9Q9D8 996 aa24.49■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Cdkl5Q3UTQ8 938 aa24.49■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 BcrQ6PAJ1 1270 aa24.49■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Sash3Q8K352 380 aa24.49■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Amhr2Q8K592 568 aa24.49■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Adcy3Q8VHH7 1145 aa24.49■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 RpainQ9CWY9 219 aa24.49■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Ccne2Q9Z238 404 aa24.49■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Col11a2Q64739 1736 aa24.48■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Foxn2E9Q7L6 429 aa24.48■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Stim1P70302 685 aa24.48■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Vars2Q3U2A8 1060 aa24.48■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Il17raQ60943 864 aa24.48■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Abtb2Q7TQI7 1024 aa24.48■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Ctdspl2Q8BG15 465 aa24.48■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Ube3bQ9ES34 1070 aa24.48■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Polr2dQ9D7M8 142 aaKnown RBP24.47■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Pdcd6ipQ9WU78 869 aaKnown RBP24.47■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Sik3Q6P4S6 1311 aa24.47■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Gm4340L7N2C4 268 aa24.47■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Lrsam1Q80ZI6 727 aa24.47■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 4930550L24RikQ99PA7 320 aa24.47■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Nup98Q6PFD9 1816 aaKnown RBP24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 PnnO35691 725 aaKnown RBP24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Prl3d1P18121 224 aa24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Nlrp9aQ66X03 949 aa24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Olfr119Q7TRJ5 321 aa24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Pde5aQ8CG03 865 aa24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Q8VDP2 222 aa24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Pcdha7Q91Y13 937 aa24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Gm10134F6ZQC6 126 aa24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Scgb2b19J3QM75 112 aa24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Metap2O08663 478 aaKnown RBP24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 ErmnQ5EBJ4 281 aa24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Ltv1Q6NSQ7 470 aaKnown RBP24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Rbm26Q6NZN0 1012 aaKnown RBP24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Epn1Q80VP1 575 aa24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Znrd1-asQ8R0E5 213 aa24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Msantd4Q91YU3 345 aa24.46■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 1700029H14RikE9PY36 240 aa24.45■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Hnrnph1O35737 449 aaKnown RBP24.45■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Psen1P49769 467 aa24.45■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Hnrnph2P70333 449 aaKnown RBP24.45■■□□□ 1.51
Ccdc9-201ENSMUST00000041010 Phc3Q8CHP6 981 aa24.45■■□□□ 1.51
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms