Protein–RNA interactions for Protein: Q91Y13

Pcdha7, Protocadherin alpha-7, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha7Q91Y13 Gm25239-201ENSMUST00000174915 86 ntBASIC38.66■■■■□ 3.78
Pcdha7Q91Y13 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
Pcdha7Q91Y13 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
Pcdha7Q91Y13 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC36.77■■■■□ 3.48
Pcdha7Q91Y13 Psd-208ENSMUST00000224556 2034 ntBASIC35.62■■■■□ 3.29
Pcdha7Q91Y13 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
Pcdha7Q91Y13 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
Pcdha7Q91Y13 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
Pcdha7Q91Y13 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Pcdha7Q91Y13 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
Pcdha7Q91Y13 Gm15042-201ENSMUST00000120212 883 ntBASIC34.64■■■■□ 3.14
Pcdha7Q91Y13 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Pcdha7Q91Y13 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Pcdha7Q91Y13 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.14■■■■□ 3.06
Pcdha7Q91Y13 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Pcdha7Q91Y13 Gm15045-201ENSMUST00000117359 883 ntBASIC34.07■■■■□ 3.04
Pcdha7Q91Y13 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Pcdha7Q91Y13 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Pcdha7Q91Y13 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
Pcdha7Q91Y13 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Pcdha7Q91Y13 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
Pcdha7Q91Y13 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Pcdha7Q91Y13 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Pcdha7Q91Y13 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
Pcdha7Q91Y13 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Pcdha7Q91Y13 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Pcdha7Q91Y13 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.13■■■□□ 2.89
Pcdha7Q91Y13 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.13■■■□□ 2.89
Pcdha7Q91Y13 Gm24109-201ENSMUST00000175489 103 ntBASIC33.13■■■□□ 2.89
Pcdha7Q91Y13 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Pcdha7Q91Y13 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Pcdha7Q91Y13 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.91■■■□□ 2.86
Pcdha7Q91Y13 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
Pcdha7Q91Y13 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
Pcdha7Q91Y13 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Pcdha7Q91Y13 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Pcdha7Q91Y13 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Pcdha7Q91Y13 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.59■■■□□ 2.81
Pcdha7Q91Y13 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.56■■■□□ 2.8
Pcdha7Q91Y13 Gm23366-201ENSMUST00000175022 89 ntBASIC32.38■■■□□ 2.77
Pcdha7Q91Y13 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.33■■■□□ 2.77
Pcdha7Q91Y13 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.3■■■□□ 2.76
Pcdha7Q91Y13 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Pcdha7Q91Y13 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Pcdha7Q91Y13 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Pcdha7Q91Y13 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Pcdha7Q91Y13 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Pcdha7Q91Y13 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Pcdha7Q91Y13 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Pcdha7Q91Y13 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.94■■■□□ 2.7
Pcdha7Q91Y13 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Pcdha7Q91Y13 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.85■■■□□ 2.69
Pcdha7Q91Y13 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
Pcdha7Q91Y13 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
Pcdha7Q91Y13 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pcdha7Q91Y13 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Pcdha7Q91Y13 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.57■■■□□ 2.65
Pcdha7Q91Y13 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Pcdha7Q91Y13 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
Pcdha7Q91Y13 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.5■■■□□ 2.63
Pcdha7Q91Y13 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Pcdha7Q91Y13 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
Pcdha7Q91Y13 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
Pcdha7Q91Y13 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Pcdha7Q91Y13 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Pcdha7Q91Y13 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Pcdha7Q91Y13 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.61
Pcdha7Q91Y13 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.6
Pcdha7Q91Y13 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
Pcdha7Q91Y13 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.12■■■□□ 2.57
Pcdha7Q91Y13 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pcdha7Q91Y13 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Pcdha7Q91Y13 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.06■■■□□ 2.56
Pcdha7Q91Y13 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31■■■□□ 2.55
Pcdha7Q91Y13 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Pcdha7Q91Y13 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.53
Pcdha7Q91Y13 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Pcdha7Q91Y13 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Pcdha7Q91Y13 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.73■■■□□ 2.51
Pcdha7Q91Y13 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Pcdha7Q91Y13 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Pcdha7Q91Y13 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pcdha7Q91Y13 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.66■■■□□ 2.5
Pcdha7Q91Y13 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Pcdha7Q91Y13 Gm27325-201ENSMUST00000175467 74 ntBASIC30.55■■■□□ 2.48
Pcdha7Q91Y13 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.55■■■□□ 2.48
Pcdha7Q91Y13 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Pcdha7Q91Y13 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Pcdha7Q91Y13 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Pcdha7Q91Y13 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Pcdha7Q91Y13 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pcdha7Q91Y13 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pcdha7Q91Y13 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
Pcdha7Q91Y13 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pcdha7Q91Y13 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Pcdha7Q91Y13 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
Pcdha7Q91Y13 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pcdha7Q91Y13 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Pcdha7Q91Y13 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
Pcdha7Q91Y13 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.28■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms