RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Fam217aQ9D9W6 419 aa15.21■□□□□ 0.02
Nup88-201ENSMUST00000035283 Egfl6Q9JJZ5 550 aa15.21■□□□□ 0.02
Nup88-201ENSMUST00000035283 A0A1Y7VML8 143 aa15.2■□□□□ 0.02
Nup88-201ENSMUST00000035283 VeztQ3ZK22 780 aa15.2■□□□□ 0.02
Nup88-201ENSMUST00000035283 Dusp9Q7TNL7 452 aa15.2■□□□□ 0.02
Nup88-201ENSMUST00000035283 Cfap100Q80VN0 613 aa15.2■□□□□ 0.02
Nup88-201ENSMUST00000035283 Rbm28Q8CGC6 750 aaKnown RBP15.2■□□□□ 0.02
Nup88-201ENSMUST00000035283 Col20a1Q923P0 1320 aa15.2■□□□□ 0.02
Nup88-201ENSMUST00000035283 Scgb2b19J3QM75 112 aa15.2■□□□□ 0.02
Nup88-201ENSMUST00000035283 Cyp3a25O09158 503 aa15.2■□□□□ 0.02
Nup88-201ENSMUST00000035283 Abl1P00520 1123 aa15.2■□□□□ 0.02
Nup88-201ENSMUST00000035283 Q3TYL0 343 aa15.2■□□□□ 0.02
Nup88-201ENSMUST00000035283 Smarca1Q6PGB8 1046 aa15.2■□□□□ 0.02
Nup88-201ENSMUST00000035283 Ttc12Q8BW49 704 aa15.2■□□□□ 0.02
Nup88-201ENSMUST00000035283 Tob2Q9JM55 345 aa15.2■□□□□ 0.02
Nup88-201ENSMUST00000035283 RragbQ6NTA4 374 aa15.19■□□□□ 0.02
Nup88-201ENSMUST00000035283 Ccdc93Q7TQK5 629 aa15.19■□□□□ 0.02
Nup88-201ENSMUST00000035283 Krt222Q8CCX5 294 aa15.19■□□□□ 0.02
Nup88-201ENSMUST00000035283 Ano2Q8CFW1 1002 aa15.19■□□□□ 0.02
Nup88-201ENSMUST00000035283 Tmem39aQ9CYC3 486 aa15.19■□□□□ 0.02
Nup88-201ENSMUST00000035283 Pard3Q99NH2 1333 aa15.19■□□□□ 0.02
Nup88-201ENSMUST00000035283 Tpp1O89023 562 aa15.19■□□□□ 0.02
Nup88-201ENSMUST00000035283 Plbd2Q3TCN2 594 aa15.19■□□□□ 0.02
Nup88-201ENSMUST00000035283 Tmem232Q5K6N0 675 aa15.19■□□□□ 0.02
Nup88-201ENSMUST00000035283 Tas2r124Q7M718 309 aa15.19■□□□□ 0.02
Nup88-201ENSMUST00000035283 Srgap2Q91Z67 1071 aa15.19■□□□□ 0.02
Nup88-201ENSMUST00000035283 Sgpp1Q9JI99 430 aa15.19■□□□□ 0.02
Nup88-201ENSMUST00000035283 Dennd3A2RT67 1274 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 ItgadQ3V0T4 1168 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Slc38a10Q5I012 1090 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Nme8Q715T0 586 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Epn1Q80VP1 575 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Clstn1Q9EPL2 979 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 MetP16056 1379 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Myh6Q02566 1938 aaKnown RBP15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Ulk4Q3V129 1303 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Gm4340L7N2C4 268 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Sec23aQ01405 765 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Setdb2Q8C267 713 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Ufl1Q8CCJ3 793 aaKnown RBP15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Ccdc96Q9CR92 584 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Tpcn1Q9EQJ0 817 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Copb1Q9JIF7 953 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Lmbr1Q9JIT0 490 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 FliiQ9JJ28 1271 aa15.18■□□□□ 0.02
Nup88-201ENSMUST00000035283 Foxn2E9Q7L6 429 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Trim34bJ3QNR8 485 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Cdr2P97817 455 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Spata5Q3UMC0 893 aaKnown RBP15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Fam161bQ8CB59 589 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Cwc15Q9JHS9 229 aaKnown RBP15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 AmfrQ9R049 643 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Fut8Q9WTS2 575 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Foxo4Q9WVH3 505 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Uso1Q9Z1Z0 959 aaKnown RBP15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Gm28042B7ZCM9 1014 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Kif23E9Q5G3 953 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Bnip3O55003 187 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 GpiP06745 558 aaKnown RBP15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Siah1aP61092 282 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Tcp11Q01755 566 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Abtb2Q7TQI7 1024 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Q8C5C9 218 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 ApobrQ8VBT6 942 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Brms1Q99N20 246 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Dpf1Q9QX66 387 aa15.17■□□□□ 0.02
Nup88-201ENSMUST00000035283 Ssc5dQ8BV57 1371 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Smarcc1P97496 1104 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Rbm12b2Q66JV4 834 aaKnown RBP15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Pip4k2bQ80XI4 416 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 MtrrQ8C1A3 696 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 NelfbQ8C4Y3 580 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 E2f4Q8R0K9 410 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Hexim1Q8R409 356 aaKnown RBP15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Klhl10Q9D5V2 608 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Plekho1Q9JIY0 408 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Cnbd1B1AWM0 430 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Speer4dL7N216 212 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Enc1O35709 589 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Abcd1P48410 736 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Meis3P97368 378 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Plekha7Q3UIL6 1118 aaKnown RBP15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Cct6bQ61390 531 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 HelbQ6NVF4 1074 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Exoc8Q6PGF7 716 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Spice1Q8C804 860 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Uchl5Q9WUP7 329 aa15.16■□□□□ 0.02
Nup88-201ENSMUST00000035283 Pak1O88643 545 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 TbcaP48428 108 aaKnown RBP15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 GscQ02591 256 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 MycbpapQ5SUV2 932 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Spata16Q8C636 571 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Ccdc14Q8K2J4 934 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Zbtb1Q91VL9 713 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 AdarQ99MU3 1178 aaKnown RBP15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Bap1Q99PU7 728 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 ToporslQ9D2F8 683 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 RabggtaQ9JHK4 567 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 Sipa1l3G3X9J0 1776 aa15.15■□□□□ 0.02
Nup88-201ENSMUST00000035283 FAM186AQ9D9R9 1790 aa15.15■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms