RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Gimap7Q8R379 293 aa23.06■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 PnnO35691 725 aaKnown RBP23.05■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Chrm1P12657 460 aa23.05■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Plekhg2Q6KAU7 1340 aa23.05■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 NppbP40753 121 aa23.05■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Kmt5bQ3U8K7 883 aa23.05■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 MycbpapQ5SUV2 932 aa23.05■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Nrbp1Q99J45 535 aa23.05■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Ktn1Q61595 1327 aaKnown RBP23.04■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Pcsk7Q61139 770 aa23.04■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Hic2Q9JLZ6 619 aaKnown RBP23.04■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Fxr1Q61584 677 aaKnown RBP23.04■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Ndufb9Q9CQJ8 179 aa23.04■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Rbm6S4R1W5 1118 aaKnown RBP23.04■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Znf667Q2TL60 609 aa23.03■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Glg1Q61543 1175 aaKnown RBP23.03■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Ano10Q8BH79 659 aa23.03■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Cnpy2Q9QXT0 182 aa23.03■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Kcnh3Q9WVJ0 1095 aa23.03■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Best3Q6H1V1 669 aa23.03■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Ccdc150Q8CDI7 1110 aa23.03■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Col4a5Q63ZW6 1691 aa23.03■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Ccp110Q7TSH4 1004 aa23.03■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Kcnk13Q8R1P5 405 aa23.03■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Jag1Q9QXX0 1218 aa23.03■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Jdp2P97875 163 aa23.02■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 LrmpQ60664 539 aa23.02■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 AsnsQ61024 561 aa23.02■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Hps4Q99KG7 671 aa23.02■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Tsc2Q61037 1814 aa23.02■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Phldb3E9QAF4 648 aa23.02■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Epb41l2O70318 988 aaKnown RBP23.02■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Ccdc34Q3UI66 367 aa23.02■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Prpf38aQ4FK66 312 aaKnown RBP23.02■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Cep120Q7TSG1 988 aa23.02■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 HibadhQ99L13 335 aaKnown RBP23.02■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 GdaQ9R111 454 aa23.02■■□□□ 1.28
Ctdsp1-201ENSMUST00000027367 Lrriq3Q14DL3 633 aa23.01■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Ano6Q6P9J9 911 aa23.01■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Gpaa1Q9WTK3 621 aa23.01■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Togaram1Q6A070 1776 aaKnown RBP23.01■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Arid4aF8VPQ2 1261 aaKnown RBP23.01■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 RadxQ8C779 850 aa23.01■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Vnn1Q9Z0K8 512 aa23.01■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Zmym2Q9CU65 1376 aa23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Ccdc88aQ5SNZ0 1873 aa23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Gm10134F6ZQC6 126 aa23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Ms4a1P19437 291 aa23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Dnaaf2Q8BPI1 814 aa23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Smc2Q8CG48 1191 aaKnown RBP23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Nup188Q6ZQH8 1759 aa23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Sycp2lA0A0M3U1B0 842 aa23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Atp8b5A3FIN4 1183 aa23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Wnt7aP24383 349 aa23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Gtf2f1Q3THK3 508 aaKnown RBP23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Ift122Q6NWV3 1182 aa23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Rbm19Q8R3C6 952 aaKnown RBP23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 MbipQ99LQ1 341 aa23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Krt23Q99PS0 422 aa23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Scn9aQ62205 1984 aa23■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 DnttP09838 530 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Scg2Q03517 617 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Fhdc1Q3ULZ2 1149 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Ankrd13aQ80UP5 588 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Ctdspl2Q8BG15 465 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Tmed8Q3UHI4 326 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Arglu1Q3UL36 271 aaKnown RBP22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Gtf2iQ9ESZ8 998 aaKnown RBP22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Clip2Q9Z0H8 1047 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Ltbp2O08999 1813 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Mtcl1Q3UHU5 1945 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Stag2O35638 1231 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Gja5Q01231 358 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 ParnQ8VDG3 624 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Vps33aQ9D2N9 598 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Mad2l2Q9D752 211 aa22.99■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Lamb1P02469 1786 aa22.98■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 PparaP23204 468 aa22.98■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Mxd3Q80US8 206 aa22.98■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Ifi35Q9D8C4 286 aa22.98■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Hmgb2P30681 210 aaKnown RBP22.98■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Wdhd1P59328 1117 aa22.98■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Terf1P70371 421 aa22.98■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Rc3h1Q4VGL6 1130 aaKnown RBP22.98■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Usp49Q6P9L4 685 aa22.98■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Kri1Q8VDQ9 704 aaKnown RBP22.98■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Vps16Q920Q4 839 aa22.98■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Iqca1Q9CUL5 857 aa22.98■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Grem2O88273 168 aa22.97■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 VrtnQ3SYK4 740 aa22.97■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Pfkfb3A7UAK5 555 aa22.97■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Gjb4Q02738 266 aa22.97■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 C87499Q3UX49 493 aa22.97■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Mars2Q499X9 586 aaKnown RBP22.97■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Olfr119Q7TRJ5 321 aa22.97■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Lrrc15Q80X72 579 aa22.97■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Csrnp2Q8BGQ2 534 aa22.97■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Hip1rQ9JKY5 1068 aa22.97■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Ambra1A2AH22 1300 aa22.97■■□□□ 1.27
Ctdsp1-201ENSMUST00000027367 Kifc2O08672 792 aa22.96■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 13.2 ms