RNA–Protein interactions for RNA: ENSMUST00000093132.12

Clk4-201, Transcript of Dual specificity protein kinase CLK4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk4, Length 1,949 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4-201ENSMUST00000093132 Smim20D3Z7Q2 69 aa8.62□□□□□ -1.03
Clk4-201ENSMUST00000093132 1700042G07RikB1AUF7 90 aa8.62□□□□□ -1.03
Clk4-201ENSMUST00000093132 Rnf213E9Q555 5152 aaKnown RBP8.61□□□□□ -1.03
Clk4-201ENSMUST00000093132 Gm20661K7N787 53 aa8.6□□□□□ -1.03
Clk4-201ENSMUST00000093132 Krtap1-5A2A590 122 aa8.6□□□□□ -1.03
Clk4-201ENSMUST00000093132 Krtap3-1A2A591 98 aa8.57□□□□□ -1.04
Clk4-201ENSMUST00000093132 Serp1Q9Z1W5 66 aa8.57□□□□□ -1.04
Clk4-201ENSMUST00000093132 Krtap1-4Q3V2D6 188 aa8.55□□□□□ -1.04
Clk4-201ENSMUST00000093132 Gm10197F6QEY5 67 aa8.54□□□□□ -1.04
Clk4-201ENSMUST00000093132 Brk1Q91VR8 75 aa8.53□□□□□ -1.04
Clk4-201ENSMUST00000093132 H2al1aQ5M8Q2 105 aa8.5□□□□□ -1.05
Clk4-201ENSMUST00000093132 H2al1eQ810S6 105 aa8.5□□□□□ -1.05
Clk4-201ENSMUST00000093132 Gm17606F6ZL36 78 aa8.48□□□□□ -1.05
Clk4-201ENSMUST00000093132 Phxr4P15974 95 aa8.47□□□□□ -1.05
Clk4-201ENSMUST00000093132 Rps28P62858 69 aaKnown RBP8.47□□□□□ -1.05
Clk4-201ENSMUST00000093132 Uqcr11Q9CPX8 56 aa8.37□□□□□ -1.07
Clk4-201ENSMUST00000093132 Gm10382Q3V0T5 144 aa8.35□□□□□ -1.07
Clk4-201ENSMUST00000093132 H2al1bA0A087WP11 105 aa8.34□□□□□ -1.07
Clk4-201ENSMUST00000093132 Limd2Q8BGB5 128 aa8.3□□□□□ -1.08
Clk4-201ENSMUST00000093132 Krtap28-10A0A1Y7VP58 119 aa8.29□□□□□ -1.08
Clk4-201ENSMUST00000093132 SspoQ8CG65 4998 aa8.28□□□□□ -1.08
Clk4-201ENSMUST00000093132 BC029722A0A0N4SW31 51 aa8.26□□□□□ -1.09
Clk4-201ENSMUST00000093132 Gm20537G3UYK7 97 aa8.26□□□□□ -1.09
Clk4-201ENSMUST00000093132 Ndufb1P0DN34 57 aa8.25□□□□□ -1.09
Clk4-201ENSMUST00000093132 Gm10061D3Z714 54 aa8.24□□□□□ -1.09
Clk4-201ENSMUST00000093132 Gm19426M0QWC7 77 aa8.23□□□□□ -1.09
Clk4-201ENSMUST00000093132 Sec61gP60060 68 aa8.19□□□□□ -1.1
Clk4-201ENSMUST00000093132 Pcp4P63054 62 aa8.09□□□□□ -1.11
Clk4-201ENSMUST00000093132 Gm9955Q8CEJ8 102 aa8.01□□□□□ -1.13
Clk4-201ENSMUST00000093132 Lce1jD3YUU5 139 aa7.99□□□□□ -1.13
Clk4-201ENSMUST00000093132 Krtap12-1Q9Z287 130 aa7.99□□□□□ -1.13
Clk4-201ENSMUST00000093132 CriptO70333 101 aa7.97□□□□□ -1.13
Clk4-201ENSMUST00000093132 A0A1Y7VLE6 161 aa7.94□□□□□ -1.14
Clk4-201ENSMUST00000093132 Spink7Q6IE32 76 aa7.92□□□□□ -1.14
Clk4-201ENSMUST00000093132 Gm11569B1AQB1 180 aa7.91□□□□□ -1.14
Clk4-201ENSMUST00000093132 Krtap19-2Q925I0 141 aa7.88□□□□□ -1.15
Clk4-201ENSMUST00000093132 Krtap19-9aF8WH65 55 aa7.86□□□□□ -1.15
Clk4-201ENSMUST00000093132 Krtap9-5A2A5X3 358 aa7.84□□□□□ -1.15
Clk4-201ENSMUST00000093132 Krtap17-1A2A5X6 109 aa7.8□□□□□ -1.16
Clk4-201ENSMUST00000093132 Sox16Q62247 57 aa7.8□□□□□ -1.16
Clk4-201ENSMUST00000093132 Krtap28-13A0A087WQP5 138 aa7.79□□□□□ -1.16
Clk4-201ENSMUST00000093132 4933415A04RikQ9D443 101 aa7.79□□□□□ -1.16
Clk4-201ENSMUST00000093132 Gm17402F6Z0L5 76 aa7.78□□□□□ -1.16
Clk4-201ENSMUST00000093132 A030005L19RikA0A1Y7VIU2 113 aa7.76□□□□□ -1.17
Clk4-201ENSMUST00000093132 Prm2P07978 107 aa7.74□□□□□ -1.17
Clk4-201ENSMUST00000093132 Sprr2a3Q4KL71 83 aa7.73□□□□□ -1.17
Clk4-201ENSMUST00000093132 B930094E09RikQ8C4T2 136 aa7.73□□□□□ -1.17
Clk4-201ENSMUST00000093132 Sprr2a1Q9CQK8 83 aa7.73□□□□□ -1.17
Clk4-201ENSMUST00000093132 Pla2g10Q9QXX3 151 aa7.73□□□□□ -1.17
Clk4-201ENSMUST00000093132 H2al1kJ3QP08 105 aa7.7□□□□□ -1.18
Clk4-201ENSMUST00000093132 Muc5bE9Q5I3 4800 aa7.67□□□□□ -1.18
Clk4-201ENSMUST00000093132 Gm7544A0A1Y7VJ58 118 aa7.67□□□□□ -1.18
Clk4-201ENSMUST00000093132 A030005K14RikA0A1Y7VNY1 122 aa7.62□□□□□ -1.19
Clk4-201ENSMUST00000093132 Gm10337F7DEP7 55 aa7.54□□□□□ -1.2
Clk4-201ENSMUST00000093132 H2al1mQ9DAD9 105 aa7.54□□□□□ -1.2
Clk4-201ENSMUST00000093132 Ndufs5Q99LY9 106 aa7.53□□□□□ -1.2
Clk4-201ENSMUST00000093132 Gm3880A0A1B0GSB3 72 aa7.51□□□□□ -1.21
Clk4-201ENSMUST00000093132 Lce1iQ9D6P5 149 aa7.5□□□□□ -1.21
Clk4-201ENSMUST00000093132 Gm6358A0A087WPH4 74 aa7.48□□□□□ -1.21
Clk4-201ENSMUST00000093132 Gm3646F6S692 53 aa7.46□□□□□ -1.21
Clk4-201ENSMUST00000093132 Krtap4-2B1AQ85 167 aa7.45□□□□□ -1.22
Clk4-201ENSMUST00000093132 Lce1gQ9D195 139 aa7.42□□□□□ -1.22
Clk4-201ENSMUST00000093132 Gm11562A0PK51 136 aa7.4□□□□□ -1.22
Clk4-201ENSMUST00000093132 Lce1a2Q9D1K4 149 aa7.39□□□□□ -1.23
Clk4-201ENSMUST00000093132 Gm11555B1AQ89 175 aa7.38□□□□□ -1.23
Clk4-201ENSMUST00000093132 Gm19668J3QMD1 248 aa7.37□□□□□ -1.23
Clk4-201ENSMUST00000093132 Mdn1A2ANY6 5589 aaKnown RBP7.35□□□□□ -1.23
Clk4-201ENSMUST00000093132 Gm21887J3QQ04 176 aa7.24□□□□□ -1.25
Clk4-201ENSMUST00000093132 Krtap4-6Q3V4B7 195 aa7.23□□□□□ -1.25
Clk4-201ENSMUST00000093132 Syne2Q6ZWQ0 6874 aaKnown RBP7.23□□□□□ -1.25
Clk4-201ENSMUST00000093132 Mt2P02798 61 aa7.23□□□□□ -1.25
Clk4-201ENSMUST00000093132 Gm12216A0A1W2P827 62 aa7.21□□□□□ -1.25
Clk4-201ENSMUST00000093132 Gm11596B1AQB0 205 aa7.18□□□□□ -1.26
Clk4-201ENSMUST00000093132 Camk2n1Q6QWF9 78 aa7.17□□□□□ -1.26
Clk4-201ENSMUST00000093132 Romo1P60603 79 aa7.13□□□□□ -1.27
Clk4-201ENSMUST00000093132 Krtap4-1Q3UUY3 169 aa7.09□□□□□ -1.27
Clk4-201ENSMUST00000093132 SvipQ3UZP4 77 aa7.09□□□□□ -1.27
Clk4-201ENSMUST00000093132 Krtap8-1O08633 61 aa7.01□□□□□ -1.29
Clk4-201ENSMUST00000093132 Krtap19-9bQ99NG9 58 aa6.98□□□□□ -1.29
Clk4-201ENSMUST00000093132 Gm11564A2A4L9 201 aa6.91□□□□□ -1.3
Clk4-201ENSMUST00000093132 Gm11563B1AQ90 168 aa6.91□□□□□ -1.3
Clk4-201ENSMUST00000093132 Gm11595B1AQA7 289 aa6.91□□□□□ -1.3
Clk4-201ENSMUST00000093132 Krtap4-8B1AQA8 209 aa6.91□□□□□ -1.3
Clk4-201ENSMUST00000093132 Krtap22-2J3QNX6 67 aa6.86□□□□□ -1.31
Clk4-201ENSMUST00000093132 A030003K21RikA0A1Y7VIM3 128 aa6.78□□□□□ -1.32
Clk4-201ENSMUST00000093132 Krtap9-3Q3V2C1 136 aa6.78□□□□□ -1.32
Clk4-201ENSMUST00000093132 A0A1Y7VJ07 166 aa6.73□□□□□ -1.33
Clk4-201ENSMUST00000093132 Krtap4-9B1AQA9 244 aa6.72□□□□□ -1.33
Clk4-201ENSMUST00000093132 Mt4P47945 62 aa6.68□□□□□ -1.34
Clk4-201ENSMUST00000093132 Fsip2A2ARZ3 6995 aa6.64□□□□□ -1.35
Clk4-201ENSMUST00000093132 Lce1bQ9D149 137 aa6.57□□□□□ -1.36
Clk4-201ENSMUST00000093132 A0A286YCP9 139 aa6.54□□□□□ -1.36
Clk4-201ENSMUST00000093132 Gm6217A0A1Y7VJK9 128 aa6.54□□□□□ -1.36
Clk4-201ENSMUST00000093132 Krtap7-1Q9D3I6 87 aa6.49□□□□□ -1.37
Clk4-201ENSMUST00000093132 Lce1hQ9D6R3 140 aa6.48□□□□□ -1.37
Clk4-201ENSMUST00000093132 Gm40193A0A1B0GT39 78 aa6.47□□□□□ -1.37
Clk4-201ENSMUST00000093132 Krtap4-13Q9D7P3 165 aa6.46□□□□□ -1.37
Clk4-201ENSMUST00000093132 Krtap4-7Q9D732 168 aa6.46□□□□□ -1.38
Clk4-201ENSMUST00000093132 Gm38119A0A0A6YX29 146 aa6.4□□□□□ -1.39
Clk4-201ENSMUST00000093132 Tnp1P10856 55 aa6.38□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms