RNA–Protein interactions for RNA: ENSMUST00000034053.6

Pdlim3-201, Transcript of PDZ and LIM domain protein 3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pdlim3, Length 1,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3-201ENSMUST00000034053 Uqcr11Q9CPX8 56 aa7.12□□□□□ -1.27
Pdlim3-201ENSMUST00000034053 Krtap28-13A0A087WQP5 138 aa7.11□□□□□ -1.27
Pdlim3-201ENSMUST00000034053 Ndufb1P0DN34 57 aa7.08□□□□□ -1.28
Pdlim3-201ENSMUST00000034053 Limd2Q8BGB5 128 aa7.08□□□□□ -1.28
Pdlim3-201ENSMUST00000034053 Krtap17-1A2A5X6 109 aa7.05□□□□□ -1.28
Pdlim3-201ENSMUST00000034053 Ubr4A2AN08 5180 aa7.04□□□□□ -1.28
Pdlim3-201ENSMUST00000034053 2210017I01RikA0A0A6YVV1 95 aa7.04□□□□□ -1.28
Pdlim3-201ENSMUST00000034053 4932415D10RikA0A1W2P6U8 4986 aa7.01□□□□□ -1.29
Pdlim3-201ENSMUST00000034053 Krtap3-1A2A591 98 aa6.99□□□□□ -1.29
Pdlim3-201ENSMUST00000034053 Gm11555B1AQ89 175 aa6.98□□□□□ -1.29
Pdlim3-201ENSMUST00000034053 Krtap16-3Q8C1I6 86 aa6.98□□□□□ -1.29
Pdlim3-201ENSMUST00000034053 Krtap13-1Q8K198 168 aa6.98□□□□□ -1.29
Pdlim3-201ENSMUST00000034053 Crct1Q6PAI5 102 aa6.97□□□□□ -1.29
Pdlim3-201ENSMUST00000034053 A030005K14RikA0A1Y7VNY1 122 aa6.96□□□□□ -1.3
Pdlim3-201ENSMUST00000034053 Krtap19-1Q925H2 87 aa6.94□□□□□ -1.3
Pdlim3-201ENSMUST00000034053 4933415A04RikQ9D443 101 aa6.94□□□□□ -1.3
Pdlim3-201ENSMUST00000034053 Krtap1-3A2A588 173 aa6.91□□□□□ -1.3
Pdlim3-201ENSMUST00000034053 Gm17606F6ZL36 78 aa6.9□□□□□ -1.3
Pdlim3-201ENSMUST00000034053 Gm10337F7DEP7 55 aa6.9□□□□□ -1.3
Pdlim3-201ENSMUST00000034053 Gm10382Q3V0T5 144 aa6.9□□□□□ -1.3
Pdlim3-201ENSMUST00000034053 Krtap19-3Q925H6 87 aa6.9□□□□□ -1.31
Pdlim3-201ENSMUST00000034053 Sox16Q62247 57 aa6.89□□□□□ -1.31
Pdlim3-201ENSMUST00000034053 H2al1kJ3QP08 105 aa6.88□□□□□ -1.31
Pdlim3-201ENSMUST00000034053 H2al1mQ9DAD9 105 aa6.88□□□□□ -1.31
Pdlim3-201ENSMUST00000034053 Krtap1-5A2A590 122 aa6.87□□□□□ -1.31
Pdlim3-201ENSMUST00000034053 Gm10318A0A1W2P728 225 aa6.86□□□□□ -1.31
Pdlim3-201ENSMUST00000034053 ZanO88799 5376 aa6.85□□□□□ -1.31
Pdlim3-201ENSMUST00000034053 Fam229aB2KGE5 128 aa6.84□□□□□ -1.31
Pdlim3-201ENSMUST00000034053 Sec61gP60060 68 aa6.83□□□□□ -1.32
Pdlim3-201ENSMUST00000034053 Gm11563B1AQ90 168 aa6.79□□□□□ -1.32
Pdlim3-201ENSMUST00000034053 Krtap4-7Q9D732 168 aa6.79□□□□□ -1.32
Pdlim3-201ENSMUST00000034053 Fat4Q2PZL6 4981 aa6.74□□□□□ -1.33
Pdlim3-201ENSMUST00000034053 Gm19402J3QJV4 266 aa6.73□□□□□ -1.33
Pdlim3-201ENSMUST00000034053 LorP18165 486 aa6.73□□□□□ -1.33
Pdlim3-201ENSMUST00000034053 Rnf213E9Q555 5152 aaKnown RBP6.73□□□□□ -1.33
Pdlim3-201ENSMUST00000034053 A030005L19RikA0A1Y7VIU2 113 aa6.69□□□□□ -1.34
Pdlim3-201ENSMUST00000034053 Gm9955Q8CEJ8 102 aa6.69□□□□□ -1.34
Pdlim3-201ENSMUST00000034053 Gm20537G3UYK7 97 aa6.68□□□□□ -1.34
Pdlim3-201ENSMUST00000034053 1700042G07RikB1AUF7 90 aa6.68□□□□□ -1.34
Pdlim3-201ENSMUST00000034053 Gm3646F6S692 53 aa6.67□□□□□ -1.34
Pdlim3-201ENSMUST00000034053 BC029722A0A0N4SW31 51 aa6.65□□□□□ -1.34
Pdlim3-201ENSMUST00000034053 Krtap1-4Q3V2D6 188 aa6.62□□□□□ -1.35
Pdlim3-201ENSMUST00000034053 Gm11562A0PK51 136 aa6.58□□□□□ -1.36
Pdlim3-201ENSMUST00000034053 Ndufs5Q99LY9 106 aa6.55□□□□□ -1.36
Pdlim3-201ENSMUST00000034053 Gm19426M0QWC7 77 aa6.52□□□□□ -1.37
Pdlim3-201ENSMUST00000034053 SspoQ8CG65 4998 aa6.45□□□□□ -1.38
Pdlim3-201ENSMUST00000034053 Gm3880A0A1B0GSB3 72 aa6.45□□□□□ -1.38
Pdlim3-201ENSMUST00000034053 Gm7544A0A1Y7VJ58 118 aa6.4□□□□□ -1.38
Pdlim3-201ENSMUST00000034053 Gm10061D3Z714 54 aa6.37□□□□□ -1.39
Pdlim3-201ENSMUST00000034053 Gm17402F6Z0L5 76 aa6.37□□□□□ -1.39
Pdlim3-201ENSMUST00000034053 B930094E09RikQ8C4T2 136 aa6.37□□□□□ -1.39
Pdlim3-201ENSMUST00000034053 Pla2g10Q9QXX3 151 aa6.37□□□□□ -1.39
Pdlim3-201ENSMUST00000034053 Spink7Q6IE32 76 aa6.35□□□□□ -1.39
Pdlim3-201ENSMUST00000034053 Lce1jD3YUU5 139 aa6.33□□□□□ -1.4
Pdlim3-201ENSMUST00000034053 A0A1Y7VJ07 166 aa6.32□□□□□ -1.4
Pdlim3-201ENSMUST00000034053 CriptO70333 101 aa6.32□□□□□ -1.4
Pdlim3-201ENSMUST00000034053 Sprr2a3Q4KL71 83 aa6.32□□□□□ -1.4
Pdlim3-201ENSMUST00000034053 Sprr2a1Q9CQK8 83 aa6.32□□□□□ -1.4
Pdlim3-201ENSMUST00000034053 Krtap12-1Q9Z287 130 aa6.28□□□□□ -1.4
Pdlim3-201ENSMUST00000034053 Krtap4-2B1AQ85 167 aa6.27□□□□□ -1.41
Pdlim3-201ENSMUST00000034053 Krtap19-9aF8WH65 55 aa6.2□□□□□ -1.42
Pdlim3-201ENSMUST00000034053 Gm12216A0A1W2P827 62 aa6.14□□□□□ -1.43
Pdlim3-201ENSMUST00000034053 Krtap19-2Q925I0 141 aa6.13□□□□□ -1.43
Pdlim3-201ENSMUST00000034053 Gm11569B1AQB1 180 aa6.12□□□□□ -1.43
Pdlim3-201ENSMUST00000034053 Prm2P07978 107 aa6.12□□□□□ -1.43
Pdlim3-201ENSMUST00000034053 Romo1P60603 79 aa6.12□□□□□ -1.43
Pdlim3-201ENSMUST00000034053 Krtap9-5A2A5X3 358 aa6.1□□□□□ -1.43
Pdlim3-201ENSMUST00000034053 Lce1gQ9D195 139 aa6.1□□□□□ -1.43
Pdlim3-201ENSMUST00000034053 Gm21887J3QQ04 176 aa6.09□□□□□ -1.43
Pdlim3-201ENSMUST00000034053 A030014E15RikA0A1Y7VJV2 120 aa6.07□□□□□ -1.44
Pdlim3-201ENSMUST00000034053 Syne2Q6ZWQ0 6874 aaKnown RBP6.06□□□□□ -1.44
Pdlim3-201ENSMUST00000034053 Muc5bE9Q5I3 4800 aa6.01□□□□□ -1.45
Pdlim3-201ENSMUST00000034053 Gm19668J3QMD1 248 aa5.96□□□□□ -1.46
Pdlim3-201ENSMUST00000034053 Lce1iQ9D6P5 149 aa5.96□□□□□ -1.46
Pdlim3-201ENSMUST00000034053 Lce1a2Q9D1K4 149 aa5.88□□□□□ -1.47
Pdlim3-201ENSMUST00000034053 Camk2n1Q6QWF9 78 aa5.86□□□□□ -1.47
Pdlim3-201ENSMUST00000034053 Gm11596B1AQB0 205 aa5.84□□□□□ -1.47
Pdlim3-201ENSMUST00000034053 Gm6358A0A087WPH4 74 aa5.81□□□□□ -1.48
Pdlim3-201ENSMUST00000034053 A030003K21RikA0A1Y7VIM3 128 aa5.77□□□□□ -1.49
Pdlim3-201ENSMUST00000034053 Krtap4-6Q3V4B7 195 aa5.67□□□□□ -1.5
Pdlim3-201ENSMUST00000034053 Krtap8-1O08633 61 aa5.66□□□□□ -1.5
Pdlim3-201ENSMUST00000034053 Mt2P02798 61 aa5.65□□□□□ -1.51
Pdlim3-201ENSMUST00000034053 Mdn1A2ANY6 5589 aaKnown RBP5.63□□□□□ -1.51
Pdlim3-201ENSMUST00000034053 Krtap7-1Q9D3I6 87 aa5.63□□□□□ -1.51
Pdlim3-201ENSMUST00000034053 Krtap19-9bQ99NG9 58 aa5.6□□□□□ -1.51
Pdlim3-201ENSMUST00000034053 Gm40193A0A1B0GT39 78 aa5.49□□□□□ -1.53
Pdlim3-201ENSMUST00000034053 Gm6217A0A1Y7VJK9 128 aa5.48□□□□□ -1.53
Pdlim3-201ENSMUST00000034053 Gm11564A2A4L9 201 aa5.46□□□□□ -1.54
Pdlim3-201ENSMUST00000034053 Gm11595B1AQA7 289 aa5.46□□□□□ -1.54
Pdlim3-201ENSMUST00000034053 Krtap4-8B1AQA8 209 aa5.46□□□□□ -1.54
Pdlim3-201ENSMUST00000034053 Krtap9-3Q3V2C1 136 aa5.36□□□□□ -1.55
Pdlim3-201ENSMUST00000034053 Mp68P56379 58 aa5.34□□□□□ -1.55
Pdlim3-201ENSMUST00000034053 Krtap22-2J3QNX6 67 aa5.34□□□□□ -1.56
Pdlim3-201ENSMUST00000034053 Tnp1P10856 55 aa5.31□□□□□ -1.56
Pdlim3-201ENSMUST00000034053 Lce1hQ9D6R3 140 aa5.3□□□□□ -1.56
Pdlim3-201ENSMUST00000034053 Krtap4-9B1AQA9 244 aa5.29□□□□□ -1.56
Pdlim3-201ENSMUST00000034053 Fsip2A2ARZ3 6995 aa5.24□□□□□ -1.57
Pdlim3-201ENSMUST00000034053 Lce1dQ9D731 133 aa5.19□□□□□ -1.58
Pdlim3-201ENSMUST00000034053 Mt4P47945 62 aa5.17□□□□□ -1.58
Pdlim3-201ENSMUST00000034053 A0A286YCP9 139 aa5.15□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 70.7 ms