RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W CHD1P32657 1468 aa6.87□□□□□ -1.31
CIT3YPR001W DFR1P07807 211 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
CIT3YPR001W SAM35P14693 329 aa6.87□□□□□ -1.31
CIT3YPR001W GCD7P32502 381 aaPredicted RBP6.87□□□□□ -1.31
CIT3YPR001W CST26P38226 397 aa6.87□□□□□ -1.31
CIT3YPR001W YHR054CP38780 354 aa6.87□□□□□ -1.31
CIT3YPR001W YHR078WP38799 552 aa6.87□□□□□ -1.31
CIT3YPR001W CTF8P38877 133 aa6.87□□□□□ -1.31
CIT3YPR001W VPS45P38932 577 aa6.87□□□□□ -1.31
CIT3YPR001W OSW5P40219 148 aa6.87□□□□□ -1.31
CIT3YPR001W ASE1P50275 885 aa6.87□□□□□ -1.31
CIT3YPR001W YGR066CP53242 292 aa6.87□□□□□ -1.31
CIT3YPR001W YPL108WQ02872 168 aaPredicted RBP6.87□□□□□ -1.31
CIT3YPR001W SPH1Q06160 661 aa6.87□□□□□ -1.31
CIT3YPR001W MMR1Q06324 491 aa6.87□□□□□ -1.31
CIT3YPR001W VPS36Q06696 566 aa6.87□□□□□ -1.31
CIT3YPR001W AIM6Q07716 390 aa6.87□□□□□ -1.31
CIT3YPR001W TMA16Q08687 178 aa6.87□□□□□ -1.31
CIT3YPR001W BMS1Q08965 1183 aaKnown RBP6.87□□□□□ -1.31
CIT3YPR001W RTC5Q12108 567 aaKnown RBP6.87□□□□□ -1.31
CIT3YPR001W ERG27Q12452 347 aaKnown RBP6.87□□□□□ -1.31
CIT3YPR001W SAC3P46674 1301 aa6.87□□□□□ -1.31
CIT3YPR001W CTT1P06115 562 aa6.86□□□□□ -1.31
CIT3YPR001W PRP45P28004 379 aaPredicted RBP6.86□□□□□ -1.31
CIT3YPR001W SWC3P31376 625 aa6.86□□□□□ -1.31
CIT3YPR001W YPT7P32939 208 aa6.86□□□□□ -1.31
CIT3YPR001W SUR1P33300 382 aa6.86□□□□□ -1.31
CIT3YPR001W PGM1P33401 570 aaKnown RBP6.86□□□□□ -1.31
CIT3YPR001W POL12P38121 705 aaPredicted RBP6.86□□□□□ -1.31
CIT3YPR001W JHD1P40034 492 aa6.86□□□□□ -1.31
CIT3YPR001W SLZ1P40167 298 aa6.86□□□□□ -1.31
CIT3YPR001W DOT5P40553 215 aa6.86□□□□□ -1.31
CIT3YPR001W MKT1P40850 830 aaKnown RBP6.86□□□□□ -1.31
CIT3YPR001W YGR012WP53206 393 aa6.86□□□□□ -1.31
CIT3YPR001W PRO2P54885 456 aaKnown RBP6.86□□□□□ -1.31
CIT3YPR001W MUB1Q03162 620 aa6.86□□□□□ -1.31
CIT3YPR001W ROY1Q04847 553 aa6.86□□□□□ -1.31
CIT3YPR001W YLR346CQ06139 101 aa6.86□□□□□ -1.31
CIT3YPR001W CDA1Q06702 301 aa6.86□□□□□ -1.31
CIT3YPR001W ISN1Q99312 450 aa6.86□□□□□ -1.31
CIT3YPR001W ERG20P08524 352 aaKnown RBP6.85□□□□□ -1.31
CIT3YPR001W PDC5P16467 563 aaKnown RBP6.85□□□□□ -1.31
CIT3YPR001W ERV1P27882 189 aa6.85□□□□□ -1.31
CIT3YPR001W TRK2P28584 889 aa6.85□□□□□ -1.31
CIT3YPR001W PCH2P38126 564 aa6.85□□□□□ -1.31
CIT3YPR001W ALG14P38242 237 aa6.85□□□□□ -1.31
CIT3YPR001W OTU2P38747 307 aaKnown RBP6.85□□□□□ -1.31
CIT3YPR001W BFR1P38934 470 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
CIT3YPR001W PZF1P39933 429 aa6.85□□□□□ -1.31
CIT3YPR001W GCD10P41814 478 aa6.85□□□□□ -1.31
CIT3YPR001W YJL171CP46992 396 aa6.85□□□□□ -1.31
CIT3YPR001W BIT61P47041 543 aa6.85□□□□□ -1.31
CIT3YPR001W SPO1P53541 631 aa6.85□□□□□ -1.31
CIT3YPR001W INN1P53901 409 aa6.85□□□□□ -1.31
CIT3YPR001W REC102Q02721 264 aa6.85□□□□□ -1.31
CIT3YPR001W CWC21Q03375 135 aaKnown RBP6.85□□□□□ -1.31
CIT3YPR001W OPT2Q06593 877 aa6.85□□□□□ -1.31
CIT3YPR001W SYT1Q06836 1226 aa6.85□□□□□ -1.31
CIT3YPR001W YEH1Q07804 573 aa6.85□□□□□ -1.31
CIT3YPR001W CTF3Q12748 733 aa6.85□□□□□ -1.31
CIT3YPR001W KES1P35844 434 aaKnown RBP6.85□□□□□ -1.31
CIT3YPR001W ADH5P38113 351 aaKnown RBP6.85□□□□□ -1.31
CIT3YPR001W RFC5P38251 354 aa6.85□□□□□ -1.31
CIT3YPR001W SFB3P38810 929 aa6.85□□□□□ -1.31
CIT3YPR001W SDP1P40479 209 aa6.85□□□□□ -1.31
CIT3YPR001W PFA3P42836 336 aa6.85□□□□□ -1.31
CIT3YPR001W YDL183CP48569 320 aa6.85□□□□□ -1.31
CIT3YPR001W PRP31P49704 494 aaPredicted RBP6.85□□□□□ -1.31
CIT3YPR001W CLU1Q03690 1277 aaKnown RBP6.85□□□□□ -1.31
CIT3YPR001W ARX1Q03862 593 aaKnown RBP6.85□□□□□ -1.31
CIT3YPR001W SEC39Q12745 709 aa6.85□□□□□ -1.31
CIT3YPR001W GRR1P24814 1151 aa6.84□□□□□ -1.31
CIT3YPR001W VPS17P32913 551 aa6.84□□□□□ -1.31
CIT3YPR001W MIC60P36112 540 aa6.84□□□□□ -1.31
CIT3YPR001W GLY1P37303 387 aaKnown RBP6.84□□□□□ -1.31
CIT3YPR001W MAL33P38157 468 aa6.84□□□□□ -1.31
CIT3YPR001W MUP3P38734 546 aa6.84□□□□□ -1.31
CIT3YPR001W SPT8P38915 602 aa6.84□□□□□ -1.31
CIT3YPR001W ZRG8P40021 1076 aa6.84□□□□□ -1.31
CIT3YPR001W AIP1P46680 615 aaKnown RBP6.84□□□□□ -1.31
CIT3YPR001W SHE4P51534 789 aa6.84□□□□□ -1.31
CIT3YPR001W ARG5,6Q01217 863 aa6.84□□□□□ -1.31
CIT3YPR001W RBA50Q04418 439 aa6.84□□□□□ -1.31
CIT3YPR001W DON1Q05610 365 aa6.84□□□□□ -1.31
CIT3YPR001W DBP9Q06218 594 aaKnown RBP6.84□□□□□ -1.31
CIT3YPR001W TCO89Q08921 799 aa6.84□□□□□ -1.31
CIT3YPR001W AIM41Q12032 185 aa6.84□□□□□ -1.31
CIT3YPR001W HER1Q12276 1246 aa6.84□□□□□ -1.31
CIT3YPR001W ADE2P21264 571 aaKnown RBP6.83□□□□□ -1.32
CIT3YPR001W APL1P27351 700 aa6.83□□□□□ -1.32
CIT3YPR001W AUR1P36107 401 aaPredicted RBP6.83□□□□□ -1.32
CIT3YPR001W REV7P38927 245 aa6.83□□□□□ -1.32
CIT3YPR001W MRX1P40050 688 aa6.83□□□□□ -1.32
CIT3YPR001W YNL195CP40168 261 aa6.83□□□□□ -1.32
CIT3YPR001W CAK1P43568 368 aaPredicted RBP6.83□□□□□ -1.32
CIT3YPR001W TAM41P53230 385 aa6.83□□□□□ -1.32
CIT3YPR001W RRN5Q02983 363 aa6.83□□□□□ -1.32
CIT3YPR001W MUS81Q04149 632 aaPredicted RBP6.83□□□□□ -1.32
CIT3YPR001W MCM21Q06675 368 aa6.83□□□□□ -1.32
CIT3YPR001W PML1Q07930 204 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 71.8 ms