RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	SQS1	P53866	767 aa	Known RBP	4	□□□□□ -1.77
NCR1	YPL006W	YAF9	P53930	226 aa		4	□□□□□ -1.77
NCR1	YPL006W	SMP3	Q04174	516 aa		4	□□□□□ -1.77
NCR1	YPL006W	ARP9	Q05123	467 aa		4	□□□□□ -1.77
NCR1	YPL006W	CFT2	Q12102	859 aa	Predicted RBP	4	□□□□□ -1.77
NCR1	YPL006W	ADF1	Q2V2Q1	113 aa		4	□□□□□ -1.77
NCR1	YPL006W	COR1	P07256	457 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	SPE1	P08432	466 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	CNA1	P23287	553 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	RAD16	P31244	790 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	MRP8	P35719	219 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	VRP1	P37370	817 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	GRS1	P38088	690 aa	Known RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	SHU2	P38957	223 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	YER186C	P40101	306 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	RSC8	P43609	557 aa	Known RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	TRF5	P48561	642 aa	Known RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	YNL115C	P53925	644 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	DOT1	Q04089	582 aa	Known RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	DYN3	Q04949	312 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	PSR1	Q07800	427 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	CHS5	Q12114	671 aa	Known RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	MSH5	Q12175	901 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	WHI2	P12611	486 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	HSP60	P19882	572 aa	Known RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	YBR285W	P38354	144 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	UTP9	P38882	575 aa	Known RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	MEF2	P39677	819 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	TMA20	P89886	181 aa	Predicted RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	SLU7	Q02775	382 aa	Known RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	SKI8	Q02793	397 aa	Predicted RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	YEH2	Q07950	538 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	PEX15	Q08215	383 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	HSH49	Q99181	213 aa	Predicted RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	URE2	P23202	354 aa	Known RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	KAR9	P32526	644 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	HSP78	P33416	811 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	PTC1	P35182	281 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	EAP1	P36041	632 aa	Known RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	YBR259W	P38338	688 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	BIT2	P38346	545 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	ECM10	P39987	644 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	PEA2	P40091	420 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	ATM1	P40416	690 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	UBP7	P40453	1071 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	VHR1	P40522	640 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	CCT7	P42943	550 aa	Known RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	GND2	P53319	492 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	REX2	P54964	269 aa	Known RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	HDA3	Q06623	655 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	THI20	Q08224	551 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	VIK1	Q12045	647 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	HOS1	Q12214	470 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	NTO1	Q12311	748 aa		3.99	□□□□□ -1.77
NCR1	YPL006W	DBP10	Q12389	995 aa	Known RBP	3.99	□□□□□ -1.77
NCR1	YPL006W	HSF1	P10961	833 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	SNF4	P12904	322 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	UGP1	P32861	499 aa	Known RBP	3.98	□□□□□ -1.77
NCR1	YPL006W	ATO2	P32907	282 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	KSP1	P38691	1029 aa	Known RBP	3.98	□□□□□ -1.77
NCR1	YPL006W	YHR182W	P38870	785 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	YHB1	P39676	399 aa	Known RBP	3.98	□□□□□ -1.77
NCR1	YPL006W	FIR1	P40020	876 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	PFD1	P46988	109 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	YJL132W	P47014	750 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	RBL2	P48606	106 aa	Known RBP	3.98	□□□□□ -1.77
NCR1	YPL006W	MRK1	P50873	501 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	AIF1	P52923	378 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	YGR054W	P53235	642 aa	Known RBP	3.98	□□□□□ -1.77
NCR1	YPL006W	ASI1	P54074	624 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	VPS9	P54787	451 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	INA17	Q02888	182 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	CSN9	Q03981	162 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	FMP42	Q04991	504 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	LDB17	Q12342	491 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	CMR1	Q12510	522 aa	Known RBP	3.98	□□□□□ -1.77
NCR1	YPL006W	SEM1	O94742	89 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	UTP11	P34247	250 aa	Predicted RBP	3.98	□□□□□ -1.77
NCR1	YPL006W	MRPL7	P36519	292 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	AGP3	P43548	558 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	GET1	P53192	235 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	MUB1	Q03162	620 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	BUD20	Q08004	166 aa	Predicted RBP	3.98	□□□□□ -1.77
NCR1	YPL006W	MSC6	Q08818	692 aa	Known RBP	3.98	□□□□□ -1.77
NCR1	YPL006W	REC8	Q12188	680 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	ADE4	P04046	510 aa	Known RBP	3.98	□□□□□ -1.77
NCR1	YPL006W	UGA1	P17649	471 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	ATP12	P22135	325 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	PEP12	P32854	288 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	CSE1	P33307	960 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	RIB7	P33312	244 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	MNN1	P39106	762 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	STB4	P50104	949 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	PEX31	P53203	462 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	ALG11	P53954	548 aa	Known RBP	3.98	□□□□□ -1.77
NCR1	YPL006W	KTR6	P54070	446 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	YKR005C	Q02203	525 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	YDR239C	Q03780	787 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	RSM24	Q03976	319 aa		3.98	□□□□□ -1.77
NCR1	YPL006W	GGA1	Q06336	557 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms