RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C SEC53P07283 254 aaKnown RBP2.74□□□□□ -1.97
DNL4YOR005C RNA1P11745 407 aaKnown RBP2.74□□□□□ -1.97
DNL4YOR005C LCB1P25045 558 aaKnown RBP2.74□□□□□ -1.97
DNL4YOR005C RXT2P38255 430 aa2.74□□□□□ -1.97
DNL4YOR005C YBR259WP38338 688 aa2.74□□□□□ -1.97
DNL4YOR005C PTC7P38797 343 aa2.74□□□□□ -1.97
DNL4YOR005C PSD1P39006 500 aa2.74□□□□□ -1.97
DNL4YOR005C FLC2P39719 783 aa2.74□□□□□ -1.97
DNL4YOR005C GTS1P40956 396 aa2.74□□□□□ -1.97
DNL4YOR005C ATP22P50273 684 aaPredicted RBP2.74□□□□□ -1.97
DNL4YOR005C COG1P53079 417 aa2.74□□□□□ -1.97
DNL4YOR005C MDR1P53258 950 aa2.74□□□□□ -1.97
DNL4YOR005C SPO1P53541 631 aa2.74□□□□□ -1.97
DNL4YOR005C AIM6Q07716 390 aa2.74□□□□□ -1.97
DNL4YOR005C ADY3Q07732 790 aa2.74□□□□□ -1.97
DNL4YOR005C CTI6Q08923 506 aa2.74□□□□□ -1.97
DNL4YOR005C YPL191CQ08930 360 aa2.74□□□□□ -1.97
DNL4YOR005C HUA2Q12134 243 aa2.74□□□□□ -1.97
DNL4YOR005C YLR302CO13544 120 aa2.74□□□□□ -1.97
DNL4YOR005C CPA2P03965 1118 aaKnown RBP2.74□□□□□ -1.97
DNL4YOR005C ERG20P08524 352 aaKnown RBP2.74□□□□□ -1.97
DNL4YOR005C TY2A-LR1P0C2J4 438 aa2.74□□□□□ -1.97
DNL4YOR005C TY2A-FP0CX61 438 aa2.74□□□□□ -1.97
DNL4YOR005C TY2A-GR2P0CX62 438 aa2.74□□□□□ -1.97
DNL4YOR005C PMS1P14242 873 aa2.74□□□□□ -1.97
DNL4YOR005C TY2A-CP25383 438 aa2.74□□□□□ -1.97
DNL4YOR005C YNG2P38806 282 aaKnown RBP2.74□□□□□ -1.97
DNL4YOR005C VFA1P40080 203 aa2.74□□□□□ -1.97
DNL4YOR005C YJL068CP40363 299 aa2.74□□□□□ -1.97
DNL4YOR005C YIL166CP40445 542 aa2.74□□□□□ -1.97
DNL4YOR005C IST3P40565 148 aaPredicted RBP2.74□□□□□ -1.97
DNL4YOR005C NPA3P47122 385 aa2.74□□□□□ -1.97
DNL4YOR005C GPI8P49018 411 aa2.74□□□□□ -1.97
DNL4YOR005C NNF2P53253 936 aa2.74□□□□□ -1.97
DNL4YOR005C RPT6Q01939 405 aaKnown RBP2.74□□□□□ -1.97
DNL4YOR005C TY2A-DR2Q03483 438 aa2.74□□□□□ -1.97
DNL4YOR005C VPS64Q03944 604 aa2.74□□□□□ -1.97
DNL4YOR005C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
DNL4YOR005C TY2A-BQ12260 438 aa2.74□□□□□ -1.97
DNL4YOR005C TY2A-OR2Q12293 438 aa2.74□□□□□ -1.97
DNL4YOR005C TY2A-DR1Q12392 438 aa2.74□□□□□ -1.97
DNL4YOR005C GRX6Q12438 231 aa2.74□□□□□ -1.97
DNL4YOR005C TY2A-OR1Q12439 438 aa2.74□□□□□ -1.97
DNL4YOR005C YOR111WQ99210 232 aa2.74□□□□□ -1.97
DNL4YOR005C TY2A-DR3Q99303 438 aa2.74□□□□□ -1.97
DNL4YOR005C APC1P53886 1748 aa2.74□□□□□ -1.97
DNL4YOR005C AUS1Q08409 1394 aa2.74□□□□□ -1.97
DNL4YOR005C TUF1P02992 437 aaKnown RBP2.74□□□□□ -1.97
DNL4YOR005C RNR1P21524 888 aaKnown RBP2.74□□□□□ -1.97
DNL4YOR005C YCK1P23291 538 aa2.74□□□□□ -1.97
DNL4YOR005C OCA4P25366 362 aa2.74□□□□□ -1.97
DNL4YOR005C AAD3P25612 363 aa2.74□□□□□ -1.97
DNL4YOR005C ELM1P32801 640 aa2.74□□□□□ -1.97
DNL4YOR005C CRG1P38892 291 aaRIP-Chip data2.74□□□□□ -1.97 RIP-Chip
DNL4YOR005C MSS4P38994 779 aa2.74□□□□□ -1.97
DNL4YOR005C FTR1P40088 404 aa2.74□□□□□ -1.97
DNL4YOR005C UBP7P40453 1071 aa2.74□□□□□ -1.97
DNL4YOR005C NOP9P47077 666 aaKnown RBP2.74□□□□□ -1.97
DNL4YOR005C VPS4P52917 437 aa2.74□□□□□ -1.97
DNL4YOR005C DSD1P53095 428 aa2.74□□□□□ -1.97
DNL4YOR005C ARI1P53111 347 aaKnown RBP2.74□□□□□ -1.97
DNL4YOR005C YNL050CP53952 270 aa2.74□□□□□ -1.97
DNL4YOR005C RNT1Q02555 471 aa2.74□□□□□ -1.97
DNL4YOR005C NGL3Q03210 505 aa2.74□□□□□ -1.97
DNL4YOR005C ENT4Q07872 247 aa2.74□□□□□ -1.97
DNL4YOR005C POM34Q12445 299 aa2.74□□□□□ -1.97
DNL4YOR005C RPS19AP07280 144 aaKnown RBP2.73□□□□□ -1.97
DNL4YOR005C RPS19BP07281 144 aaPredicted RBP2.73□□□□□ -1.97
DNL4YOR005C ERG6P25087 383 aaKnown RBP2.73□□□□□ -1.97
DNL4YOR005C KIN82P25341 720 aa2.73□□□□□ -1.97
DNL4YOR005C SED4P25365 1065 aa2.73□□□□□ -1.97
DNL4YOR005C ADK2P26364 225 aa2.73□□□□□ -1.97
DNL4YOR005C BRF1P29056 596 aa2.73□□□□□ -1.97
DNL4YOR005C SEC21P32074 935 aaKnown RBP2.73□□□□□ -1.97
DNL4YOR005C RFC1P38630 861 aaKnown RBP2.73□□□□□ -1.97
DNL4YOR005C SFB3P38810 929 aa2.73□□□□□ -1.97
DNL4YOR005C RMT2Q03305 412 aa2.73□□□□□ -1.97
DNL4YOR005C VPS20Q04272 221 aa2.73□□□□□ -1.97
DNL4YOR005C TPO1Q07824 586 aa2.73□□□□□ -1.97
DNL4YOR005C PET122P10355 254 aa2.73□□□□□ -1.97
DNL4YOR005C YCK2P23292 546 aaKnown RBP2.73□□□□□ -1.97
DNL4YOR005C RPS7AP26786 190 aaKnown RBP2.73□□□□□ -1.97
DNL4YOR005C GEX2P36173 615 aa2.73□□□□□ -1.97
DNL4YOR005C MRPL10P36520 322 aa2.73□□□□□ -1.97
DNL4YOR005C APT2P36973 181 aa2.73□□□□□ -1.97
DNL4YOR005C AAD10P47182 288 aa2.73□□□□□ -1.97
DNL4YOR005C HOS2P53096 452 aaPredicted RBP2.73□□□□□ -1.97
DNL4YOR005C REG1Q00816 1014 aa2.73□□□□□ -1.97
DNL4YOR005C YML119WQ03208 357 aa2.73□□□□□ -1.97
DNL4YOR005C RAD30Q04049 632 aa2.73□□□□□ -1.97
DNL4YOR005C ARP9Q05123 467 aa2.73□□□□□ -1.97
DNL4YOR005C GPB1Q08886 897 aa2.73□□□□□ -1.97
DNL4YOR005C RCN2Q12044 265 aa2.73□□□□□ -1.97
DNL4YOR005C ISA2Q12425 185 aa2.73□□□□□ -1.97
DNL4YOR005C HRP1Q99383 534 aaKnown RBP2.73□□□□□ -1.97
DNL4YOR005C SOD2P00447 233 aa2.72□□□□□ -1.97
DNL4YOR005C GAL10P04397 699 aa2.72□□□□□ -1.97
DNL4YOR005C PET111P08468 800 aa2.72□□□□□ -1.97
DNL4YOR005C CHS2P14180 963 aa2.72□□□□□ -1.97
DNL4YOR005C KAR3P17119 729 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms