RNA–Protein interactions for RNA: YOL122C

SMF1, Transcript of Divalent metal ion transporter, yeast

Gene SMF1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMF1	YOL122C	REG1	Q00816	1014 aa		4.62	□□□□□ -1.67
SMF1	YOL122C	YMR102C	Q03177	834 aa		4.62	□□□□□ -1.67
SMF1	YOL122C	GSF2	Q04697	403 aa	Known RBP	4.62	□□□□□ -1.67
SMF1	YOL122C	VIP1	Q06685	1146 aa	Known RBP	4.62	□□□□□ -1.67
SMF1	YOL122C	LSP1	Q12230	341 aa	Known RBP	4.62	□□□□□ -1.67
SMF1	YOL122C	YKL033W-A	Q86ZR7	236 aa		4.62	□□□□□ -1.67
SMF1	YOL122C	SMC4	Q12267	1418 aa		4.62	□□□□□ -1.67
SMF1	YOL122C	MRP20	P32387	263 aa		4.61	□□□□□ -1.67
SMF1	YOL122C	ELF1	P36053	145 aa		4.61	□□□□□ -1.67
SMF1	YOL122C	CSL4	P53859	292 aa	Predicted RBP	4.61	□□□□□ -1.67
SMF1	YOL122C	EFR3	Q03653	782 aa	Known RBP	4.61	□□□□□ -1.67
SMF1	YOL122C	ARR1	Q06596	294 aa		4.61	□□□□□ -1.67
SMF1	YOL122C	PNO1	Q99216	274 aa	Known RBP	4.61	□□□□□ -1.67
SMF1	YOL122C	STU1	P38198	1513 aa		4.61	□□□□□ -1.67
SMF1	YOL122C	LTE1	P07866	1435 aa		4.61	□□□□□ -1.67
SMF1	YOL122C	MRP7	P12687	371 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	STE11	P23561	717 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	NUF2	P33895	451 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	DHR2	P36009	735 aa	Predicted RBP	4.6	□□□□□ -1.67
SMF1	YOL122C	CTP1	P38152	299 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	RKM3	P38222	552 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	YJR061W	P40355	935 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	IDS2	P46958	469 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	ARE2	P53629	642 aa	Known RBP	4.6	□□□□□ -1.67
SMF1	YOL122C	BSC5	P53755	489 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	JJJ1	P53863	590 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	RRB1	Q04225	511 aa	Known RBP	4.6	□□□□□ -1.67
SMF1	YOL122C	CRF1	Q04930	467 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	FRE5	Q08908	694 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	SEC39	Q12745	709 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	YLR302C	O13544	120 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	ATP2	P00830	511 aa	Known RBP	4.6	□□□□□ -1.67
SMF1	YOL122C	RPL19A	P0CX82	189 aa	Known RBP	4.6	□□□□□ -1.67
SMF1	YOL122C	RPL19B	P0CX83	189 aa	Predicted RBP	4.6	□□□□□ -1.67
SMF1	YOL122C	YCR061W	P25639	631 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	RPL5	P26321	297 aa	Known RBP	4.6	□□□□□ -1.67
SMF1	YOL122C	CMK1	P27466	446 aa	Known RBP	4.6	□□□□□ -1.67
SMF1	YOL122C	BRF1	P29056	596 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	NDC80	P40460	691 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	MNN10	P50108	393 aa	Known RBP	4.6	□□□□□ -1.67
SMF1	YOL122C	PHO23	P50947	330 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	SNF12	P53628	566 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	YSA1	Q01976	231 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	TAF11	Q04226	346 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	YDR341C	Q05506	607 aa	Known RBP	4.6	□□□□□ -1.67
SMF1	YOL122C	ENT4	Q07872	247 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	USV1	Q12132	391 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	TAF2	P23255	1407 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	ATG2	P53855	1592 aa		4.6	□□□□□ -1.67
SMF1	YOL122C	TUB2	P02557	457 aa	Known RBP	4.59	□□□□□ -1.67
SMF1	YOL122C	RPB2	P08518	1224 aa	Known RBP	4.59	□□□□□ -1.67
SMF1	YOL122C	OLE1	P21147	510 aa	Known RBP	4.59	□□□□□ -1.67
SMF1	YOL122C	ERG4	P25340	473 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	FUB1	P25659	250 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	DPH5	P32469	300 aa	Predicted RBP	4.59	□□□□□ -1.67
SMF1	YOL122C	GEX2	P36173	615 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	OLA1	P38219	394 aa	Known RBP	4.59	□□□□□ -1.67
SMF1	YOL122C	YBR225W	P38321	900 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	REV7	P38927	245 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	FMP52	P40008	231 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	TPA1	P40032	644 aa	Known RBP	4.59	□□□□□ -1.67
SMF1	YOL122C	IST3	P40565	148 aa	Predicted RBP	4.59	□□□□□ -1.67
SMF1	YOL122C	IAH1	P41734	238 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	VTC2	P43585	828 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	IRC6	P43615	237 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	DUO1	P53168	247 aa	Known RBP	4.59	□□□□□ -1.67
SMF1	YOL122C	YNL050C	P53952	270 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	YPL108W	Q02872	168 aa	Predicted RBP	4.59	□□□□□ -1.67
SMF1	YOL122C	MFB1	Q04922	465 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	RRP9	Q06506	573 aa	Known RBP	4.59	□□□□□ -1.67
SMF1	YOL122C	TMA16	Q08687	178 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	CIR2	Q08822	631 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	MET5	P47169	1442 aa		4.59	□□□□□ -1.67
SMF1	YOL122C	NUP170	P38181	1502 aa		4.59	□□□□□ -1.68
SMF1	YOL122C	TRM3	Q07527	1436 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	PMA1	P05030	918 aa	Known RBP	4.58	□□□□□ -1.68
SMF1	YOL122C	SUI3	P09064	285 aa	Known RBP	4.58	□□□□□ -1.68
SMF1	YOL122C	VPS34	P22543	875 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	ERG8	P24521	451 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	SGF29	P25554	259 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	URK1	P27515	501 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	NTH1	P32356	751 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	GDT1	P38301	280 aa	Predicted RBP	4.58	□□□□□ -1.68
SMF1	YOL122C	TOM71	P38825	639 aa	Known RBP	4.58	□□□□□ -1.68
SMF1	YOL122C	NPR2	P39923	615 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	SGM1	P47166	707 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	YDL086W	Q07505	273 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	RIX7	Q07844	837 aa	Known RBP	4.58	□□□□□ -1.68
SMF1	YOL122C	SFI1	Q12369	946 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	RAD9	P14737	1309 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	EFT1	P32324	842 aa	Known RBP	4.58	□□□□□ -1.68
SMF1	YOL122C	ARO9	P38840	513 aa	Predicted RBP	4.58	□□□□□ -1.68
SMF1	YOL122C	RTT107	P38850	1070 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	SEC27	P41811	889 aa	Known RBP	4.58	□□□□□ -1.68
SMF1	YOL122C	RMD8	P43620	662 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	YNR061C	P53747	219 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	MRPL19	P53875	158 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	ARP5	P53946	755 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	MRS2	Q01926	470 aa		4.58	□□□□□ -1.68
SMF1	YOL122C	USA1	Q03714	838 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 39 ms