RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	PRR1	P28708	518 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	PEX6	P33760	1030 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	HCS1	P34243	683 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	YBR139W	P38109	508 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	KAP104	P38217	918 aa	Known RBP	4.05	□□□□□ -1.76
ATG2	YNL242W	SUL1	P38359	859 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	PHO89	P38361	574 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	YHB1	P39676	399 aa	Known RBP	4.05	□□□□□ -1.76
ATG2	YNL242W	KHA1	P40309	873 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	ACF4	P47129	309 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	MSE1	P48525	536 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	TRF5	P48561	642 aa	Known RBP	4.05	□□□□□ -1.76
ATG2	YNL242W	GPI1	P53306	609 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	SWP1	Q02795	286 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	YMR209C	Q03648	457 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	RAD30	Q04049	632 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	PPN1	Q04119	674 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	PRM6	Q04705	352 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	YLR278C	Q05854	1341 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	CCP1	P00431	361 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	SPT15	P13393	240 aa	Known RBP	4.05	□□□□□ -1.76
ATG2	YNL242W	PHO81	P17442	1178 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	VPS33	P20795	691 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	PTP2	P29461	750 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	APM2	P38700	605 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	GAA1	P39012	614 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	CHS6	P40955	746 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	RRN7	P40992	514 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	SSN8	P47821	323 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	ABZ2	Q03266	374 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	RRP17	Q04031	235 aa	Predicted RBP	4.05	□□□□□ -1.76
ATG2	YNL242W	SIZ1	Q04195	904 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	IVY1	Q04934	453 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	FAR10	Q06001	478 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	MLC2	Q06580	163 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	YPR172W	Q06608	200 aa		4.05	□□□□□ -1.76
ATG2	YNL242W	CDC31	P06704	161 aa	Known RBP	4.04	□□□□□ -1.76
ATG2	YNL242W	PHO4	P07270	312 aa	Known RBP	4.04	□□□□□ -1.76
ATG2	YNL242W	TFC1	P32367	649 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	SUV3	P32580	737 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	MDJ1	P35191	511 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	APD1	P38281	316 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	SEO1	P39709	593 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	CGR1	P53188	120 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	MRPL50	P53724	139 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	SED5	Q01590	340 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	SRL4	Q03085	281 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	URC2	Q04411	772 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	FLC1	Q08967	793 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	NMT1	P14743	455 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	PER1	P25625	357 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	RPS7A	P26786	190 aa	Known RBP	4.04	□□□□□ -1.76
ATG2	YNL242W	TOM20	P35180	183 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	LSM12	P38828	187 aa	Known RBP	4.04	□□□□□ -1.76
ATG2	YNL242W	SOL4	P53315	255 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	DID2	P69771	204 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	SYO1	Q07395	620 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	YDL129W	Q07555	291 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	YOR342C	Q12182	319 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	REC8	Q12188	680 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	RAD59	Q12223	238 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	TEF1	P02994	458 aa	Known RBP	4.04	□□□□□ -1.76
ATG2	YNL242W	SLY1	P22213	666 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	UBC8	P28263	218 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	CAP1	P28495	268 aa	Known RBP	4.04	□□□□□ -1.76
ATG2	YNL242W	SIP2	P34164	415 aa	Known RBP	4.04	□□□□□ -1.76
ATG2	YNL242W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
ATG2	YNL242W	PCM1	P38628	557 aa	Known RBP	4.04	□□□□□ -1.76
ATG2	YNL242W	YHI9	P38765	294 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.04	□□□□□ -1.76	not detected
ATG2	YNL242W	SDS3	P40505	327 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	VMA13	P41807	478 aa	Known RBP	4.04	□□□□□ -1.76
ATG2	YNL242W	ELP2	P42935	788 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	MET12	P46151	657 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	EFM3	P47163	339 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	SAM37	P50110	327 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	ARE2	P53629	642 aa	Known RBP	4.04	□□□□□ -1.76
ATG2	YNL242W	DCS1	Q06151	350 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	TCO89	Q08921	799 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	VPS54	Q12071	889 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	TAO3	P40468	2376 aa		4.04	□□□□□ -1.76
ATG2	YNL242W	MAS1	P10507	462 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	NSP1	P14907	823 aa	Known RBP	4.03	□□□□□ -1.76
ATG2	YNL242W	IDI1	P15496	288 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	DBP3	P20447	523 aa	Known RBP	4.03	□□□□□ -1.76
ATG2	YNL242W	SAR1	P20606	190 aa	Known RBP	4.03	□□□□□ -1.76
ATG2	YNL242W	CHS3	P29465	1165 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	DUR3	P33413	735 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	ICP55	P40051	511 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	ASG1	P40467	964 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	CNN1	P43618	361 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	MDV1	P47025	714 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	RPL22B	P56628	122 aa	Known RBP	4.03	□□□□□ -1.76
ATG2	YNL242W	SLT2	Q00772	484 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	YMR010W	Q03687	405 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	CDC34	P14682	295 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	ASK1	P35734	292 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	MRPL40	P36534	297 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	MTG2	P38860	518 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	YHR218W	P38899	603 aa		4.03	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms