RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C YHR045WP38775 560 aa2.56□□□□□ -2
SGS1YMR190C UBX6P47049 396 aa2.56□□□□□ -2
SGS1YMR190C RPC17P47076 161 aa2.56□□□□□ -2
SGS1YMR190C UTP5Q04177 643 aaKnown RBP2.56□□□□□ -2
SGS1YMR190C IES4Q08561 116 aa2.56□□□□□ -2
SGS1YMR190C NUR1Q12066 484 aa2.56□□□□□ -2
SGS1YMR190C YDR262WQ12331 272 aa2.56□□□□□ -2
SGS1YMR190C SFG1Q12507 346 aa2.56□□□□□ -2
SGS1YMR190C UBR2Q07963 1872 aa2.56□□□□□ -2
SGS1YMR190C PDR1P12383 1068 aa2.56□□□□□ -2
SGS1YMR190C EMC1P25574 760 aa2.56□□□□□ -2
SGS1YMR190C ATG15P25641 520 aa2.56□□□□□ -2
SGS1YMR190C RAM2P29703 316 aa2.56□□□□□ -2
SGS1YMR190C NAM7P30771 971 aaKnown RBP2.56□□□□□ -2
SGS1YMR190C MRP4P32902 394 aa2.56□□□□□ -2
SGS1YMR190C PIN4P34217 668 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
SGS1YMR190C SHP1P34223 423 aa2.56□□□□□ -2
SGS1YMR190C GIP4P39732 760 aa2.56□□□□□ -2
SGS1YMR190C FRT2P39734 528 aa2.56□□□□□ -2
SGS1YMR190C MMM1P41800 426 aa2.56□□□□□ -2
SGS1YMR190C HOL1P53389 586 aa2.56□□□□□ -2
SGS1YMR190C ALG12P53730 551 aa2.56□□□□□ -2
SGS1YMR190C SHE9Q04172 456 aa2.56□□□□□ -2
SGS1YMR190C FMP25Q08023 583 aa2.56□□□□□ -2
SGS1YMR190C YPL216WQ08964 1102 aa2.56□□□□□ -2
SGS1YMR190C SRO7Q12038 1033 aa2.56□□□□□ -2
SGS1YMR190C NBP2Q12163 236 aa2.56□□□□□ -2
SGS1YMR190C RPS3P05750 240 aaKnown RBP2.56□□□□□ -2
SGS1YMR190C RPO26P20435 155 aa2.56□□□□□ -2
SGS1YMR190C LRP1P38801 184 aaKnown RBP2.56□□□□□ -2
SGS1YMR190C PHO86P46956 311 aa2.56□□□□□ -2
SGS1YMR190C YGR021WP53212 290 aa2.56□□□□□ -2
SGS1YMR190C SLG1P54867 378 aa2.56□□□□□ -2
SGS1YMR190C YLR287CQ05881 355 aa2.56□□□□□ -2
SGS1YMR190C YPR078CQ06813 372 aa2.56□□□□□ -2
SGS1YMR190C SPO75Q07798 868 aa2.56□□□□□ -2
SGS1YMR190C ENO2P00925 437 aaKnown RBP2.56□□□□□ -2
SGS1YMR190C RIP1P08067 215 aa2.56□□□□□ -2
SGS1YMR190C RPB2P08518 1224 aaKnown RBP2.56□□□□□ -2
SGS1YMR190C MCM1P11746 286 aa2.56□□□□□ -2
SGS1YMR190C RED1P14291 827 aa2.56□□□□□ -2
SGS1YMR190C TGL4P36165 910 aa2.56□□□□□ -2
SGS1YMR190C CCT4P39078 528 aaKnown RBP2.56□□□□□ -2
SGS1YMR190C TOF1P53840 1238 aa2.56□□□□□ -2
SGS1YMR190C ORC3P54790 616 aa2.56□□□□□ -2
SGS1YMR190C GLO2Q05584 274 aa2.56□□□□□ -2
SGS1YMR190C VTA1Q06263 330 aa2.56□□□□□ -2
SGS1YMR190C YLR422WQ06409 1932 aa2.56□□□□□ -2
SGS1YMR190C SST2P11972 698 aaKnown RBP2.55□□□□□ -2
SGS1YMR190C PET123P17558 318 aa2.55□□□□□ -2
SGS1YMR190C MCM7P38132 845 aa2.55□□□□□ -2
SGS1YMR190C POL31P46957 487 aa2.55□□□□□ -2
SGS1YMR190C YNL146WP53906 100 aa2.55□□□□□ -2
SGS1YMR190C RPL22BP56628 122 aaKnown RBP2.55□□□□□ -2
SGS1YMR190C PRP38Q00723 242 aaPredicted RBP2.55□□□□□ -2
SGS1YMR190C RSC4Q02206 625 aa2.55□□□□□ -2
SGS1YMR190C YDR090CQ03193 310 aa2.55□□□□□ -2
SGS1YMR190C RPN4Q03465 531 aa2.55□□□□□ -2
SGS1YMR190C YML096WQ04489 525 aa2.55□□□□□ -2
SGS1YMR190C TDA5Q06417 326 aaKnown RBP2.55□□□□□ -2
SGS1YMR190C YER152CP10356 443 aa2.55□□□□□ -2
SGS1YMR190C DOM34P33309 386 aa2.55□□□□□ -2
SGS1YMR190C CNS1P33313 385 aa2.55□□□□□ -2
SGS1YMR190C MFT1P33441 392 aaKnown RBP2.55□□□□□ -2
SGS1YMR190C YHR112CP38716 378 aa2.55□□□□□ -2
SGS1YMR190C SPT8P38915 602 aa2.55□□□□□ -2
SGS1YMR190C DUN1P39009 513 aa2.55□□□□□ -2
SGS1YMR190C CTK3P46963 296 aaPredicted RBP2.55□□□□□ -2
SGS1YMR190C SWC4P53201 476 aa2.55□□□□□ -2
SGS1YMR190C ARG7Q04728 441 aa2.55□□□□□ -2
SGS1YMR190C SOV1Q04748 898 aa2.55□□□□□ -2
SGS1YMR190C YKL068W-AQ3E826 78 aa2.55□□□□□ -2
SGS1YMR190C PNO1Q99216 274 aaKnown RBP2.55□□□□□ -2
SGS1YMR190C SEY1Q99287 776 aa2.55□□□□□ -2
SGS1YMR190C SNF5P18480 905 aa2.55□□□□□ -2
SGS1YMR190C PET309P32522 965 aaPredicted RBP2.55□□□□□ -2
SGS1YMR190C PMC1P38929 1173 aaPredicted RBP2.55□□□□□ -2
SGS1YMR190C MOT3P54785 490 aaKnown RBP2.55□□□□□ -2
SGS1YMR190C TIM8P57744 87 aa2.55□□□□□ -2
SGS1YMR190C CEF1Q03654 590 aaPredicted RBP2.55□□□□□ -2
SGS1YMR190C VTI1Q04338 217 aa2.55□□□□□ -2
SGS1YMR190C ATG38Q05789 226 aaKnown RBP2.55□□□□□ -2
SGS1YMR190C ECI1Q05871 280 aa2.55□□□□□ -2
SGS1YMR190C DDC1Q08949 612 aa2.55□□□□□ -2
SGS1YMR190C HUA2Q12134 243 aa2.55□□□□□ -2
SGS1YMR190C NSI1Q12457 570 aa2.55□□□□□ -2
SGS1YMR190C AI5_BETAQ9ZZX0 354 aa2.55□□□□□ -2
SGS1YMR190C RNR1P21524 888 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C SSE1P32589 693 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C SWI3P32591 825 aa2.54□□□□□ -2
SGS1YMR190C PRS3P38689 320 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C TIF34P40217 347 aaKnown RBP2.54□□□□□ -2
SGS1YMR190C LTP1P40347 161 aa2.54□□□□□ -2
SGS1YMR190C NDC80P40460 691 aa2.54□□□□□ -2
SGS1YMR190C YJR124CP47159 448 aa2.54□□□□□ -2
SGS1YMR190C ARH1P48360 493 aa2.54□□□□□ -2
SGS1YMR190C SCS3P53012 380 aa2.54□□□□□ -2
SGS1YMR190C MNP1P53163 194 aaPredicted RBP2.54□□□□□ -2
SGS1YMR190C SGF73P53165 657 aa2.54□□□□□ -2
SGS1YMR190C YMR206WQ03695 313 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms