RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W FIS1P40515 155 aa1.86□□□□□ -2.11
RTP1YMR185W SEC27P41811 889 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W CTR1P49573 406 aa1.86□□□□□ -2.11
RTP1YMR185W IST1P53843 298 aaPredicted RBP1.86□□□□□ -2.11
RTP1YMR185W ROT1Q03691 256 aa1.86□□□□□ -2.11
RTP1YMR185W ACL4Q03771 387 aa1.86□□□□□ -2.11
RTP1YMR185W AIM33Q04516 312 aa1.86□□□□□ -2.11
RTP1YMR185W IVY1Q04934 453 aa1.86□□□□□ -2.11
RTP1YMR185W KAP95Q06142 861 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W NUT2Q06213 157 aa1.86□□□□□ -2.11
RTP1YMR185W GGA1Q06336 557 aa1.86□□□□□ -2.11
RTP1YMR185W YDL114WQ07530 308 aa1.86□□□□□ -2.11
RTP1YMR185W WHI4Q07655 649 aaKnown RBP1.86□□□□□ -2.11
RTP1YMR185W NSE1Q07913 336 aa1.86□□□□□ -2.11
RTP1YMR185W IMA2Q08295 589 aa1.86□□□□□ -2.11
RTP1YMR185W MET7Q08645 548 aa1.86□□□□□ -2.11
RTP1YMR185W YDR018CQ12185 396 aa1.86□□□□□ -2.11
RTP1YMR185W HRT3Q12347 344 aa1.86□□□□□ -2.11
RTP1YMR185W ATG11Q12527 1178 aa1.86□□□□□ -2.11
RTP1YMR185W AI5_BETAQ9ZZX0 354 aa1.86□□□□□ -2.11
RTP1YMR185W YLR358CO13565 187 aa1.85□□□□□ -2.11
RTP1YMR185W SOD2P00447 233 aa1.85□□□□□ -2.11
RTP1YMR185W ILV1P00927 576 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W BI2P03873 423 aa1.85□□□□□ -2.11
RTP1YMR185W BI4P03879 638 aa1.85□□□□□ -2.11
RTP1YMR185W ATR1P13090 542 aa1.85□□□□□ -2.11
RTP1YMR185W SEC63P14906 663 aa1.85□□□□□ -2.11
RTP1YMR185W COX11P19516 300 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W AEP2P22136 580 aa1.85□□□□□ -2.11
RTP1YMR185W DPB2P24482 689 aaPredicted RBP1.85□□□□□ -2.11
RTP1YMR185W MSH2P25847 964 aa1.85□□□□□ -2.11
RTP1YMR185W TMT1P32643 299 aa1.85□□□□□ -2.11
RTP1YMR185W YEL1P34225 687 aa1.85□□□□□ -2.11
RTP1YMR185W THI80P35202 319 aa1.85□□□□□ -2.11
RTP1YMR185W CSG2P35206 410 aa1.85□□□□□ -2.11
RTP1YMR185W NUP120P35729 1037 aa1.85□□□□□ -2.11
RTP1YMR185W CST26P38226 397 aa1.85□□□□□ -2.11
RTP1YMR185W EXO84P38261 753 aa1.85□□□□□ -2.11
RTP1YMR185W YBR259WP38338 688 aa1.85□□□□□ -2.11
RTP1YMR185W OAF1P39720 1047 aaPredicted RBP1.85□□□□□ -2.11
RTP1YMR185W STL1P39932 569 aa1.85□□□□□ -2.11
RTP1YMR185W SAH1P39954 449 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W CAB2P40506 365 aa1.85□□□□□ -2.11
RTP1YMR185W STB1P42845 420 aa1.85□□□□□ -2.11
RTP1YMR185W LAM5P43560 674 aa1.85□□□□□ -2.11
RTP1YMR185W BIR1P47134 954 aa1.85□□□□□ -2.11
RTP1YMR185W NUP84P52891 726 aa1.85□□□□□ -2.11
RTP1YMR185W RTA1P53047 317 aa1.85□□□□□ -2.11
RTP1YMR185W YNL247WP53852 767 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W SQS1P53866 767 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W ARK1P53974 638 aa1.85□□□□□ -2.11
RTP1YMR185W ORC3P54790 616 aa1.85□□□□□ -2.11
RTP1YMR185W TVP15Q03860 143 aa1.85□□□□□ -2.11
RTP1YMR185W THI7Q05998 598 aa1.85□□□□□ -2.11
RTP1YMR185W YLH47Q06493 454 aa1.85□□□□□ -2.11
RTP1YMR185W OXR1Q08952 273 aa1.85□□□□□ -2.11
RTP1YMR185W CHS5Q12114 671 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W RUP1Q12242 671 aa1.85□□□□□ -2.11
RTP1YMR185W GRX6Q12438 231 aa1.85□□□□□ -2.11
RTP1YMR185W FRT1Q99332 602 aa1.85□□□□□ -2.11
RTP1YMR185W BI3Q9ZZW7 517 aa1.85□□□□□ -2.11
RTP1YMR185W PAB1P04147 577 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
RTP1YMR185W RPS9BP05755 195 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W RAD10P06838 210 aa1.85□□□□□ -2.11
RTP1YMR185W SSC1P0CS90 654 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W CDC42P19073 191 aa1.85□□□□□ -2.11
RTP1YMR185W RNR1P21524 888 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W RRT12P25381 491 aa1.85□□□□□ -2.11
RTP1YMR185W BUD23P25627 275 aaPredicted RBP1.85□□□□□ -2.11
RTP1YMR185W RPN2P32565 945 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W UBP11P36026 717 aa1.85□□□□□ -2.11
RTP1YMR185W YKR078WP36158 585 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W PAM1P37304 830 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W ETR1P38071 380 aa1.85□□□□□ -2.11
RTP1YMR185W RIM2P38127 377 aa1.85□□□□□ -2.11
RTP1YMR185W FTH1P38310 465 aa1.85□□□□□ -2.11
RTP1YMR185W SMF2P38778 549 aa1.85□□□□□ -2.11
RTP1YMR185W PEX28P38848 579 aa1.85□□□□□ -2.11
RTP1YMR185W SHC1P39000 512 aa1.85□□□□□ -2.11
RTP1YMR185W MPT5P39016 859 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11 RIP-Chip
RTP1YMR185W PDS1P40316 373 aaPredicted RBP1.85□□□□□ -2.11
RTP1YMR185W SNL1P40548 159 aa1.85□□□□□ -2.11
RTP1YMR185W RBL2P48606 106 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W YML6P51998 286 aa1.85□□□□□ -2.11
RTP1YMR185W YGR125WP53273 1036 aa1.85□□□□□ -2.11
RTP1YMR185W RSM24Q03976 319 aa1.85□□□□□ -2.11
RTP1YMR185W RAD30Q04049 632 aa1.85□□□□□ -2.11
RTP1YMR185W ERB1Q04660 807 aaKnown RBP1.85□□□□□ -2.11
RTP1YMR185W YDR278CQ05612 105 aa1.85□□□□□ -2.11
RTP1YMR185W COQ9Q05779 260 aa1.85□□□□□ -2.11
RTP1YMR185W YDL121CQ07541 149 aa1.85□□□□□ -2.11
RTP1YMR185W YLR053CQ12026 108 aa1.85□□□□□ -2.11
RTP1YMR185W ARP6Q12509 438 aa1.85□□□□□ -2.11
RTP1YMR185W YPR089WO13585 888 aa1.84□□□□□ -2.11
RTP1YMR185W RPL24AP04449 155 aaKnown RBP1.84□□□□□ -2.11
RTP1YMR185W CMD1P06787 147 aaKnown RBP1.84□□□□□ -2.11
RTP1YMR185W PET122P10355 254 aa1.84□□□□□ -2.11
RTP1YMR185W KSS1P14681 368 aa1.84□□□□□ -2.11
RTP1YMR185W FAR1P21268 830 aa1.84□□□□□ -2.11
RTP1YMR185W AMD2P22580 549 aa1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 32.6 ms