RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeast

Gene YPT6, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT6	YLR262C	STP3	Q05937	343 aa		4.04	□□□□□ -1.76
YPT6	YLR262C	IWR1	Q07532	353 aa	Predicted RBP	4.04	□□□□□ -1.76
YPT6	YLR262C	YPR089W	O13585	888 aa		4.03	□□□□□ -1.76
YPT6	YLR262C	ILV2	P07342	687 aa	Known RBP	4.03	□□□□□ -1.76
YPT6	YLR262C	APA1	P16550	321 aa	Known RBP	4.03	□□□□□ -1.76
YPT6	YLR262C	MCM3	P24279	971 aa	Known RBP	4.03	□□□□□ -1.76
YPT6	YLR262C	MSH1	P25846	959 aa		4.03	□□□□□ -1.76
YPT6	YLR262C	KES1	P35844	434 aa	Known RBP	4.03	□□□□□ -1.76
YPT6	YLR262C	RPF2	P36160	344 aa	Known RBP	4.03	□□□□□ -1.76
YPT6	YLR262C	YHL041W	P38730	149 aa		4.03	□□□□□ -1.76
YPT6	YLR262C	ERV46	P39727	415 aa		4.03	□□□□□ -1.76
YPT6	YLR262C	LSC1	P53598	329 aa	Known RBP	4.03	□□□□□ -1.76
YPT6	YLR262C	ARA2	Q04212	335 aa		4.03	□□□□□ -1.76
YPT6	YLR262C	COX1	P00401	534 aa		4.02	□□□□□ -1.77
YPT6	YLR262C	ATP4	P05626	244 aa		4.02	□□□□□ -1.77
YPT6	YLR262C	KGD2	P19262	463 aa	Predicted RBP	4.02	□□□□□ -1.77
YPT6	YLR262C	ARP2	P32381	391 aa	Known RBP	4.02	□□□□□ -1.77
YPT6	YLR262C	YBR138C	P38277	524 aa		4.02	□□□□□ -1.77
YPT6	YLR262C	VBA2	P38358	474 aa	Known RBP	4.02	□□□□□ -1.77
YPT6	YLR262C	UBP7	P40453	1071 aa		4.02	□□□□□ -1.77
YPT6	YLR262C	CIN1	P40987	1014 aa		4.02	□□□□□ -1.77
YPT6	YLR262C	CPR6	P53691	371 aa	Known RBP	4.02	□□□□□ -1.77
YPT6	YLR262C	YPL108W	Q02872	168 aa	Predicted RBP	4.02	□□□□□ -1.77
YPT6	YLR262C	EIS1	Q05050	843 aa	Known RBP	4.02	□□□□□ -1.77
YPT6	YLR262C	NEW1	Q08972	1196 aa	Known RBP	4.02	□□□□□ -1.77
YPT6	YLR262C	PFA4	Q12006	378 aa		4.02	□□□□□ -1.77
YPT6	YLR262C	SUL2	Q12325	893 aa		4.02	□□□□□ -1.77
YPT6	YLR262C	PET122	P10355	254 aa		4.01	□□□□□ -1.77
YPT6	YLR262C	MAK32	P23060	363 aa		4.01	□□□□□ -1.77
YPT6	YLR262C	GSH1	P32477	678 aa		4.01	□□□□□ -1.77
YPT6	YLR262C	FLO5	P38894	1075 aa		4.01	□□□□□ -1.77
YPT6	YLR262C	FUN12	P39730	1002 aa	Known RBP	4.01	□□□□□ -1.77
YPT6	YLR262C	VPS27	P40343	622 aa	Known RBP	4.01	□□□□□ -1.77
YPT6	YLR262C	YIL024C	P40543	189 aa		4.01	□□□□□ -1.77
YPT6	YLR262C	IRC7	P43623	340 aa		4.01	□□□□□ -1.77
YPT6	YLR262C	YAT1	P80235	687 aa		4.01	□□□□□ -1.77
YPT6	YLR262C	ATG21	Q02887	496 aa		4.01	□□□□□ -1.77
YPT6	YLR262C	MRPL1	Q04599	285 aa		4.01	□□□□□ -1.77
YPT6	YLR262C	LYS21	Q12122	440 aa	Known RBP	4.01	□□□□□ -1.77
YPT6	YLR262C	HER1	Q12276	1246 aa		4.01	□□□□□ -1.77
YPT6	YLR262C	COQ3	P27680	312 aa		4	□□□□□ -1.77
YPT6	YLR262C	MGM1	P32266	881 aa		4	□□□□□ -1.77
YPT6	YLR262C	YMR124W	P39523	943 aa	Known RBP	4	□□□□□ -1.77
YPT6	YLR262C	PUG1	P40100	303 aa		4	□□□□□ -1.77
YPT6	YLR262C	ZAP1	P47043	880 aa		4	□□□□□ -1.77
YPT6	YLR262C	NUP53	Q03790	475 aa		4	□□□□□ -1.77
YPT6	YLR262C	IOC4	Q04213	475 aa		4	□□□□□ -1.77
YPT6	YLR262C	YBR255C-A	Q3E776	120 aa		4	□□□□□ -1.77
YPT6	YLR262C	GAL4	P04386	881 aa		3.99	□□□□□ -1.77
YPT6	YLR262C	ILS1	P09436	1072 aa	Known RBP	3.99	□□□□□ -1.77
YPT6	YLR262C	MIS1	P09440	975 aa	Known RBP	3.99	□□□□□ -1.77
YPT6	YLR262C	CLB4	P24871	460 aa		3.99	□□□□□ -1.77
YPT6	YLR262C	URK1	P27515	501 aa		3.99	□□□□□ -1.77
YPT6	YLR262C	LAC1	P28496	418 aa		3.99	□□□□□ -1.77
YPT6	YLR262C	UBX6	P47049	396 aa		3.99	□□□□□ -1.77
YPT6	YLR262C	COP1	P53622	1201 aa	Known RBP	3.99	□□□□□ -1.77
YPT6	YLR262C	YPL191C	Q08930	360 aa		3.99	□□□□□ -1.77
YPT6	YLR262C	CET1	O13297	549 aa	Predicted RBP	3.98	□□□□□ -1.77
YPT6	YLR262C	PHO81	P17442	1178 aa		3.98	□□□□□ -1.77
YPT6	YLR262C	PTC6	P25646	442 aa		3.98	□□□□□ -1.77
YPT6	YLR262C	SWC3	P31376	625 aa		3.98	□□□□□ -1.77
YPT6	YLR262C	CFD1	P40558	293 aa		3.98	□□□□□ -1.77
YPT6	YLR262C	ERR3	P42222	437 aa		3.98	□□□□□ -1.77
YPT6	YLR262C	SKP2	P42843	763 aa		3.98	□□□□□ -1.77
YPT6	YLR262C	YDR109C	Q04585	715 aa		3.98	□□□□□ -1.77
YPT6	YLR262C	RRP6	Q12149	733 aa	Known RBP	3.98	□□□□□ -1.77
YPT6	YLR262C	RVB2	Q12464	471 aa	Known RBP	3.98	□□□□□ -1.77
YPT6	YLR262C	NCP1	P16603	691 aa	Known RBP	3.97	□□□□□ -1.77
YPT6	YLR262C	RFA2	P26754	273 aa	Known RBP	3.97	□□□□□ -1.77
YPT6	YLR262C	GCD7	P32502	381 aa	Predicted RBP	3.97	□□□□□ -1.77
YPT6	YLR262C	RPT2	P40327	437 aa	Known RBP	3.97	□□□□□ -1.77
YPT6	YLR262C	RAD26	P40352	1085 aa		3.97	□□□□□ -1.77
YPT6	YLR262C	IMA1	P53051	589 aa		3.97	□□□□□ -1.77
YPT6	YLR262C	YPR003C	P53394	754 aa		3.97	□□□□□ -1.77
YPT6	YLR262C	LEA1	Q08963	238 aa	Predicted RBP	3.97	□□□□□ -1.77
YPT6	YLR262C	GCS1	P35197	352 aa		3.96	□□□□□ -1.78
YPT6	YLR262C	NOP2	P40991	618 aa	Known RBP	3.96	□□□□□ -1.78
YPT6	YLR262C	YNL058C	P53947	316 aa		3.96	□□□□□ -1.78
YPT6	YLR262C	TRS130	Q03660	1102 aa		3.96	□□□□□ -1.78
YPT6	YLR262C	THI3	Q07471	609 aa		3.96	□□□□□ -1.78
YPT6	YLR262C	YER190C-B	P0CX94	160 aa		3.95	□□□□□ -1.78
YPT6	YLR262C	YEL077W-A	P0CX95	160 aa		3.95	□□□□□ -1.78
YPT6	YLR262C	YGR296C-B	P0CX96	160 aa		3.95	□□□□□ -1.78
YPT6	YLR262C	YPL283W-B	P0CX97	160 aa		3.95	□□□□□ -1.78
YPT6	YLR262C	YPR204C-A	P0CX98	160 aa		3.95	□□□□□ -1.78
YPT6	YLR262C	RPT3	P33298	428 aa	Known RBP	3.95	□□□□□ -1.78
YPT6	YLR262C	HES1	P35843	434 aa		3.95	□□□□□ -1.78
YPT6	YLR262C	FSH1	P38777	243 aa	Known RBP	3.95	□□□□□ -1.78
YPT6	YLR262C	ACA1	P39970	489 aa		3.95	□□□□□ -1.78
YPT6	YLR262C	UBX4	P54730	416 aa		3.95	□□□□□ -1.78
YPT6	YLR262C	MTG1	Q03151	367 aa	Predicted RBP	3.95	□□□□□ -1.78
YPT6	YLR262C	GET3	Q12154	354 aa	Known RBP	3.95	□□□□□ -1.78
YPT6	YLR262C	PGI1	P12709	554 aa	Known RBP	3.94	□□□□□ -1.78
YPT6	YLR262C	MSS51	P32335	436 aa		3.94	□□□□□ -1.78
YPT6	YLR262C	PSF2	P40359	213 aa		3.94	□□□□□ -1.78
YPT6	YLR262C	ORC5	P50874	479 aa		3.94	□□□□□ -1.78
YPT6	YLR262C	ARC35	P53731	342 aa	Known RBP	3.94	□□□□□ -1.78
YPT6	YLR262C	ADE16	P54113	591 aa	Known RBP	3.94	□□□□□ -1.78
YPT6	YLR262C	GTB1	Q04924	702 aa		3.94	□□□□□ -1.78
YPT6	YLR262C	CIA1	Q05583	330 aa		3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms