RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W YAR028WP39548 234 aa2.42□□□□□ -2.02
NUP100YKL068W FMP10P40098 244 aa2.42□□□□□ -2.02
NUP100YKL068W MAD2P40958 196 aa2.42□□□□□ -2.02
NUP100YKL068W CEP3P40969 608 aa2.42□□□□□ -2.02
NUP100YKL068W GCV2P49095 1034 aa2.42□□□□□ -2.02
NUP100YKL068W CUL3P53202 744 aa2.42□□□□□ -2.02
NUP100YKL068W EOS1P53938 366 aa2.42□□□□□ -2.02
NUP100YKL068W RAD30Q04049 632 aa2.42□□□□□ -2.02
NUP100YKL068W YPR196WQ06595 470 aa2.42□□□□□ -2.02
NUP100YKL068W CTI6Q08923 506 aa2.42□□□□□ -2.02
NUP100YKL068W PSY3Q12318 242 aa2.42□□□□□ -2.02
NUP100YKL068W RPL19AP0CX82 189 aaKnown RBP2.42□□□□□ -2.02
NUP100YKL068W RPL19BP0CX83 189 aaPredicted RBP2.42□□□□□ -2.02
NUP100YKL068W HOM2P13663 365 aaKnown RBP2.42□□□□□ -2.02
NUP100YKL068W MER1P16523 270 aa2.42□□□□□ -2.02
NUP100YKL068W PET123P17558 318 aa2.42□□□□□ -2.02
NUP100YKL068W ACO1P19414 778 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
NUP100YKL068W DIT1P21623 536 aa2.42□□□□□ -2.02
NUP100YKL068W RFA1P22336 621 aaKnown RBP2.42□□□□□ -2.02
NUP100YKL068W YCK1P23291 538 aa2.42□□□□□ -2.02
NUP100YKL068W NIP1P32497 812 aaKnown RBP2.42□□□□□ -2.02
NUP100YKL068W SSE1P32589 693 aaKnown RBP2.42□□□□□ -2.02
NUP100YKL068W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
NUP100YKL068W MTG2P38860 518 aa2.42□□□□□ -2.02
NUP100YKL068W BFR1P38934 470 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02 RIP-Chip
NUP100YKL068W SIP4P46954 829 aa2.42□□□□□ -2.02
NUP100YKL068W ACS1Q01574 713 aa2.42□□□□□ -2.02
NUP100YKL068W LEE1Q02799 301 aaKnown RBP2.42□□□□□ -2.02
NUP100YKL068W TY1A-DR2Q03964 440 aaKnown RBP2.42□□□□□ -2.02
NUP100YKL068W TAP42Q04372 366 aa2.42□□□□□ -2.02
NUP100YKL068W VBA4Q04602 768 aaKnown RBP2.42□□□□□ -2.02
NUP100YKL068W GTB1Q04924 702 aa2.42□□□□□ -2.02
NUP100YKL068W CRF1Q04930 467 aa2.42□□□□□ -2.02
NUP100YKL068W OPT2Q06593 877 aa2.42□□□□□ -2.02
NUP100YKL068W RSB1Q08417 382 aa2.42□□□□□ -2.02
NUP100YKL068W DIN7Q12086 430 aa2.42□□□□□ -2.02
NUP100YKL068W YOR022CQ12204 715 aa2.42□□□□□ -2.02
NUP100YKL068W YLR302CO13544 120 aa2.41□□□□□ -2.02
NUP100YKL068W TUB2P02557 457 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W HEM1P09950 548 aaPredicted RBP2.41□□□□□ -2.02
NUP100YKL068W PRP28P23394 588 aa2.41□□□□□ -2.02
NUP100YKL068W RSC6P25632 483 aa2.41□□□□□ -2.02
NUP100YKL068W IMG2P25642 146 aaPredicted RBP2.41□□□□□ -2.02
NUP100YKL068W ERV1P27882 189 aa2.41□□□□□ -2.02
NUP100YKL068W CAP1P28495 268 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W SUR1P33300 382 aa2.41□□□□□ -2.02
NUP100YKL068W ATG19P35193 415 aa2.41□□□□□ -2.02
NUP100YKL068W CTF13P35203 478 aa2.41□□□□□ -2.02
NUP100YKL068W MIA40P36046 403 aa2.41□□□□□ -2.02
NUP100YKL068W YKR018CP36114 725 aa2.41□□□□□ -2.02
NUP100YKL068W PCH2P38126 564 aa2.41□□□□□ -2.02
NUP100YKL068W REI1P38344 393 aaPredicted RBP2.41□□□□□ -2.02
NUP100YKL068W OTU2P38747 307 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W SSZ1P38788 538 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W CTM1P38818 585 aa2.41□□□□□ -2.02
NUP100YKL068W LYS9P38999 446 aa2.41□□□□□ -2.02
NUP100YKL068W YEL057CP39983 233 aa2.41□□□□□ -2.02
NUP100YKL068W SEC9P40357 651 aa2.41□□□□□ -2.02
NUP100YKL068W EPL1P43572 832 aa2.41□□□□□ -2.02
NUP100YKL068W GYP7P48365 746 aa2.41□□□□□ -2.02
NUP100YKL068W MNT2P53059 558 aa2.41□□□□□ -2.02
NUP100YKL068W BRE5P53741 515 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W NOG2P53742 486 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W YNR071CP53757 342 aa2.41□□□□□ -2.02
NUP100YKL068W JJJ1P53863 590 aa2.41□□□□□ -2.02
NUP100YKL068W GCR2Q01722 534 aa2.41□□□□□ -2.02
NUP100YKL068W RRN5Q02983 363 aa2.41□□□□□ -2.02
NUP100YKL068W DON1Q05610 365 aa2.41□□□□□ -2.02
NUP100YKL068W GPB1Q08886 897 aa2.41□□□□□ -2.02
NUP100YKL068W PCL8Q08966 492 aa2.41□□□□□ -2.02
NUP100YKL068W ACM1Q08981 209 aa2.41□□□□□ -2.02
NUP100YKL068W SPE3Q12074 293 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W YDR461C-AQ2V2P7 80 aa2.41□□□□□ -2.02
NUP100YKL068W YLL067CQ07888 1374 aa2.41□□□□□ -2.02
NUP100YKL068W PRC1P00729 532 aa2.41□□□□□ -2.02
NUP100YKL068W RPS17AP02407 136 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W CDC24P11433 854 aaPredicted RBP2.41□□□□□ -2.02
NUP100YKL068W CBS1P14066 229 aa2.41□□□□□ -2.02
NUP100YKL068W RPS17BP14127 136 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W EST1P17214 699 aaPredicted RBP2.41□□□□□ -2.02
NUP100YKL068W MRP20P32387 263 aa2.41□□□□□ -2.02
NUP100YKL068W GLY1P37303 387 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W ADH5P38113 351 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W FLR1P38124 548 aa2.41□□□□□ -2.02
NUP100YKL068W HSM3P38348 480 aa2.41□□□□□ -2.02
NUP100YKL068W QNS1P38795 714 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W UTP9P38882 575 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W SET5P38890 526 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W PFK26P40433 827 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W LYS5P50113 272 aa2.41□□□□□ -2.02
NUP100YKL068W COG1P53079 417 aa2.41□□□□□ -2.02
NUP100YKL068W NNF2P53253 936 aa2.41□□□□□ -2.02
NUP100YKL068W SNF12P53628 566 aa2.41□□□□□ -2.02
NUP100YKL068W CWC21Q03375 135 aaKnown RBP2.41□□□□□ -2.02
NUP100YKL068W MMR1Q06324 491 aa2.41□□□□□ -2.02
NUP100YKL068W YPS7Q06325 596 aa2.41□□□□□ -2.02
NUP100YKL068W AVO1Q08236 1176 aa2.41□□□□□ -2.02
NUP100YKL068W MDH1P17505 334 aaKnown RBP RIP-Chip data2.4□□□□□ -2.02not detected
NUP100YKL068W ICL1P28240 557 aaPredicted RBP2.4□□□□□ -2.02
NUP100YKL068W MSP1P28737 362 aa2.4□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms