RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W TCO89Q08921 799 aa5.46□□□□□ -1.54
RPB4YJL140W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
RPB4YJL140W SPC110P32380 944 aa5.45□□□□□ -1.54
RPB4YJL140W TYE7P33122 291 aaPredicted RBP5.45□□□□□ -1.54
RPB4YJL140W XRS2P33301 854 aa5.45□□□□□ -1.54
RPB4YJL140W KTR4P38131 464 aa5.45□□□□□ -1.54
RPB4YJL140W YER186CP40101 306 aa5.45□□□□□ -1.54
RPB4YJL140W TOK1P40310 691 aa5.45□□□□□ -1.54
RPB4YJL140W SHQ1P40486 507 aaPredicted RBP5.45□□□□□ -1.54
RPB4YJL140W FYV8P46949 817 aaKnown RBP5.45□□□□□ -1.54
RPB4YJL140W CAF130P53280 1122 aaPredicted RBP5.45□□□□□ -1.54
RPB4YJL140W LEE1Q02799 301 aaKnown RBP5.45□□□□□ -1.54
RPB4YJL140W TRS130Q03660 1102 aa5.45□□□□□ -1.54
RPB4YJL140W MFB1Q04922 465 aa5.45□□□□□ -1.54
RPB4YJL140W YLR287CQ05881 355 aa5.45□□□□□ -1.54
RPB4YJL140W VPS38Q05919 439 aa5.45□□□□□ -1.54
RPB4YJL140W COG4Q06096 861 aa5.45□□□□□ -1.54
RPB4YJL140W SHS1Q07657 551 aa5.45□□□□□ -1.54
RPB4YJL140W TRP4P07285 380 aaPredicted RBP5.44□□□□□ -1.54
RPB4YJL140W MTF2P10849 440 aa5.44□□□□□ -1.54
RPB4YJL140W TUP1P16649 713 aa5.44□□□□□ -1.54
RPB4YJL140W PEX34P25584 144 aa5.44□□□□□ -1.54
RPB4YJL140W STO1P34160 861 aaKnown RBP5.44□□□□□ -1.54
RPB4YJL140W MMS4P38257 691 aa5.44□□□□□ -1.54
RPB4YJL140W SDP1P40479 209 aa5.44□□□□□ -1.54
RPB4YJL140W SCD6P45978 349 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54 RIP-Chip
RPB4YJL140W BFA1P47113 574 aa5.44□□□□□ -1.54
RPB4YJL140W APT1P49435 187 aaKnown RBP5.44□□□□□ -1.54
RPB4YJL140W TAD1P53065 400 aa5.44□□□□□ -1.54
RPB4YJL140W SPC98P53540 846 aa5.44□□□□□ -1.54
RPB4YJL140W YPR071WQ12346 211 aa5.44□□□□□ -1.54
RPB4YJL140W LAS17Q12446 633 aa5.44□□□□□ -1.54
RPB4YJL140W RPS9AO13516 197 aaKnown RBP5.43□□□□□ -1.54
RPB4YJL140W PPR1P07272 904 aaPredicted RBP5.43□□□□□ -1.54
RPB4YJL140W RPL4AP10664 362 aaKnown RBP5.43□□□□□ -1.54
RPB4YJL140W SSB1P11484 613 aaKnown RBP5.43□□□□□ -1.54
RPB4YJL140W HSP60P19882 572 aaKnown RBP5.43□□□□□ -1.54
RPB4YJL140W RAD57P25301 460 aa5.43□□□□□ -1.54
RPB4YJL140W CYS3P31373 394 aaKnown RBP5.43□□□□□ -1.54
RPB4YJL140W SSB2P40150 613 aaKnown RBP5.43□□□□□ -1.54
RPB4YJL140W YIL108WP40483 696 aaKnown RBP5.43□□□□□ -1.54
RPB4YJL140W RPL4BP49626 362 aaKnown RBP5.43□□□□□ -1.54
RPB4YJL140W STB4P50104 949 aa5.43□□□□□ -1.54
RPB4YJL140W SHE10P53075 577 aa5.43□□□□□ -1.54
RPB4YJL140W TAM41P53230 385 aa5.43□□□□□ -1.54
RPB4YJL140W YKR011CQ02209 353 aa5.43□□□□□ -1.54
RPB4YJL140W VTC3Q02725 835 aa5.43□□□□□ -1.54
RPB4YJL140W SSL1Q04673 461 aaPredicted RBP5.43□□□□□ -1.54
RPB4YJL140W YLR001CQ07895 862 aa5.43□□□□□ -1.54
RPB4YJL140W NSE1Q07913 336 aa5.43□□□□□ -1.54
RPB4YJL140W RPL40AP0CH08 128 aaKnown RBP5.42□□□□□ -1.54
RPB4YJL140W RPL40BP0CH09 128 aaKnown RBP5.42□□□□□ -1.54
RPB4YJL140W VPS3P23643 1011 aa5.42□□□□□ -1.54
RPB4YJL140W ARE1P25628 610 aa5.42□□□□□ -1.54
RPB4YJL140W PRR1P28708 518 aa5.42□□□□□ -1.54
RPB4YJL140W YSC83P32792 385 aa5.42□□□□□ -1.54
RPB4YJL140W UBP13P38187 747 aa5.42□□□□□ -1.54
RPB4YJL140W EFM2P38347 419 aa5.42□□□□□ -1.54
RPB4YJL140W CTF8P38877 133 aa5.42□□□□□ -1.54
RPB4YJL140W CAJ1P39101 391 aa5.42□□□□□ -1.54
RPB4YJL140W EFM4P40516 257 aa5.42□□□□□ -1.54
RPB4YJL140W CEP3P40969 608 aa5.42□□□□□ -1.54
RPB4YJL140W ALF1P53904 254 aa5.42□□□□□ -1.54
RPB4YJL140W SEC5P89102 971 aa5.42□□□□□ -1.54
RPB4YJL140W STP1Q00947 519 aa5.42□□□□□ -1.54
RPB4YJL140W ADA2Q02336 434 aa5.42□□□□□ -1.54
RPB4YJL140W YHM2Q04013 314 aa5.42□□□□□ -1.54
RPB4YJL140W MLH2Q07980 695 aa5.42□□□□□ -1.54
RPB4YJL140W MED1Q12321 566 aa5.42□□□□□ -1.54
RPB4YJL140W SFI1Q12369 946 aa5.42□□□□□ -1.54
RPB4YJL140W HBN1Q96VH4 193 aa5.42□□□□□ -1.54
RPB4YJL140W MEX67Q99257 599 aaKnown RBP5.42□□□□□ -1.54
RPB4YJL140W GAL80P04387 435 aa5.41□□□□□ -1.54
RPB4YJL140W RPS14AP06367 137 aaKnown RBP5.41□□□□□ -1.54
RPB4YJL140W MPH2P0CD99 609 aa5.41□□□□□ -1.54
RPB4YJL140W PCK1P10963 549 aa5.41□□□□□ -1.54
RPB4YJL140W PHO8P11491 566 aa5.41□□□□□ -1.54
RPB4YJL140W NIP100P33420 868 aa5.41□□□□□ -1.54
RPB4YJL140W YKL023WP36103 277 aaKnown RBP5.41□□□□□ -1.54
RPB4YJL140W YBR284WP38150 797 aa5.41□□□□□ -1.54
RPB4YJL140W RPS14BP39516 138 aaKnown RBP5.41□□□□□ -1.54
RPB4YJL140W LCB2P40970 561 aa5.41□□□□□ -1.54
RPB4YJL140W NIT3P49954 291 aa5.41□□□□□ -1.54
RPB4YJL140W ORC5P50874 479 aa5.41□□□□□ -1.54
RPB4YJL140W BOP3P53958 396 aa5.41□□□□□ -1.54
RPB4YJL140W YML053CQ04978 212 aa5.41□□□□□ -1.54
RPB4YJL140W LEA1Q08963 238 aaPredicted RBP5.41□□□□□ -1.54
RPB4YJL140W NEW1Q08972 1196 aaKnown RBP5.41□□□□□ -1.54
RPB4YJL140W NOP58Q12499 511 aaKnown RBP5.41□□□□□ -1.54
RPB4YJL140W APM4Q99186 491 aa5.41□□□□□ -1.54
RPB4YJL140W CUP1-1P0CX80 61 aa5.4□□□□□ -1.54
RPB4YJL140W CUP1-2P0CX81 61 aa5.4□□□□□ -1.54
RPB4YJL140W ERG4P25340 473 aa5.4□□□□□ -1.54
RPB4YJL140W MED6P38782 295 aa5.4□□□□□ -1.54
RPB4YJL140W FMO1P38866 432 aa5.4□□□□□ -1.54
RPB4YJL140W ZAP1P47043 880 aa5.4□□□□□ -1.54
RPB4YJL140W BUL1P48524 976 aa5.4□□□□□ -1.54
RPB4YJL140W ASN1P49089 572 aaKnown RBP5.4□□□□□ -1.54
RPB4YJL140W PRP31P49704 494 aaPredicted RBP5.4□□□□□ -1.54
RPB4YJL140W PSP1P50896 841 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms