RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C MVP1P40959 511 aaKnown RBP7.39□□□□□ -1.23
PUP2YGR253C TFG2P41896 400 aaPredicted RBP7.39□□□□□ -1.23
PUP2YGR253C ROK1P45818 564 aaPredicted RBP7.39□□□□□ -1.23
PUP2YGR253C SIP4P46954 829 aa7.39□□□□□ -1.23
PUP2YGR253C RFX1P48743 811 aa7.39□□□□□ -1.23
PUP2YGR253C TIM13P53299 105 aa7.39□□□□□ -1.23
PUP2YGR253C CSL4P53859 292 aaPredicted RBP7.39□□□□□ -1.23
PUP2YGR253C UFO1Q04511 668 aa7.39□□□□□ -1.23
PUP2YGR253C YLL032CQ07834 825 aaKnown RBP RIP-Chip data7.39□□□□□ -1.23not detected
PUP2YGR253C YOR338WQ99326 363 aa7.39□□□□□ -1.23
PUP2YGR253C COX5AP00424 153 aa7.38□□□□□ -1.23
PUP2YGR253C INH1P01097 85 aa7.38□□□□□ -1.23
PUP2YGR253C ABF1P14164 731 aa7.38□□□□□ -1.23
PUP2YGR253C RED1P14291 827 aa7.38□□□□□ -1.23
PUP2YGR253C SPO12P17123 173 aa7.38□□□□□ -1.23
PUP2YGR253C CWP1P28319 239 aa7.38□□□□□ -1.23
PUP2YGR253C MEI4P29467 408 aa7.38□□□□□ -1.23
PUP2YGR253C DBF4P32325 704 aa7.38□□□□□ -1.23
PUP2YGR253C SCD5P34758 872 aa7.38□□□□□ -1.23
PUP2YGR253C IRS4P36115 615 aaKnown RBP7.38□□□□□ -1.23
PUP2YGR253C SRP72P38688 640 aaKnown RBP7.38□□□□□ -1.23
PUP2YGR253C OTU2P38747 307 aaKnown RBP7.38□□□□□ -1.23
PUP2YGR253C YMR124WP39523 943 aaKnown RBP7.38□□□□□ -1.23
PUP2YGR253C CTK3P46963 296 aaPredicted RBP7.38□□□□□ -1.23
PUP2YGR253C CSN12P47130 423 aa7.38□□□□□ -1.23
PUP2YGR253C SWC4P53201 476 aa7.38□□□□□ -1.23
PUP2YGR253C JJJ1P53863 590 aa7.38□□□□□ -1.23
PUP2YGR253C YNL143CP53908 130 aa7.38□□□□□ -1.23
PUP2YGR253C SYH1Q02875 849 aaKnown RBP7.38□□□□□ -1.23
PUP2YGR253C ENT5Q03769 411 aaKnown RBP7.38□□□□□ -1.23
PUP2YGR253C MSH6Q03834 1242 aa7.38□□□□□ -1.23
PUP2YGR253C POB3Q04636 552 aaKnown RBP7.38□□□□□ -1.23
PUP2YGR253C PDR1P12383 1068 aa7.37□□□□□ -1.23
PUP2YGR253C PHO13P19881 312 aa7.37□□□□□ -1.23
PUP2YGR253C YCR015CP25616 317 aa7.37□□□□□ -1.23
PUP2YGR253C EAP1P36041 632 aaKnown RBP7.37□□□□□ -1.23
PUP2YGR253C TFA2P36145 328 aa7.37□□□□□ -1.23
PUP2YGR253C IST3P40565 148 aaPredicted RBP7.37□□□□□ -1.23
PUP2YGR253C YGR266WP53326 701 aa7.37□□□□□ -1.23
PUP2YGR253C NOG2P53742 486 aaKnown RBP7.37□□□□□ -1.23
PUP2YGR253C TEP1P53916 434 aa7.37□□□□□ -1.23
PUP2YGR253C YMR018WQ04364 514 aa7.37□□□□□ -1.23
PUP2YGR253C ARG7Q04728 441 aa7.37□□□□□ -1.23
PUP2YGR253C OPY2Q06810 360 aa7.37□□□□□ -1.23
PUP2YGR253C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
PUP2YGR253C YDR061WQ12298 539 aa7.37□□□□□ -1.23
PUP2YGR253C TUB1P09733 447 aaKnown RBP7.36□□□□□ -1.23
PUP2YGR253C SEC23P15303 768 aaKnown RBP7.36□□□□□ -1.23
PUP2YGR253C PPH21P23594 369 aa7.36□□□□□ -1.23
PUP2YGR253C PCA1P38360 1216 aa7.36□□□□□ -1.23
PUP2YGR253C PMC1P38929 1173 aaPredicted RBP7.36□□□□□ -1.23
PUP2YGR253C ELO3P40319 345 aa7.36□□□□□ -1.23
PUP2YGR253C NUP85P46673 744 aa7.36□□□□□ -1.23
PUP2YGR253C YGR021WP53212 290 aa7.36□□□□□ -1.23
PUP2YGR253C ATG16Q03818 150 aa7.36□□□□□ -1.23
PUP2YGR253C LDB18Q07887 179 aa7.36□□□□□ -1.23
PUP2YGR253C ATG9Q12142 997 aa7.36□□□□□ -1.23
PUP2YGR253C SKM1Q12469 655 aa7.36□□□□□ -1.23
PUP2YGR253C CSF1Q12150 2958 aa7.35□□□□□ -1.23
PUP2YGR253C GAL11P19659 1081 aa7.35□□□□□ -1.23
PUP2YGR253C SFL1P20134 766 aa7.35□□□□□ -1.23
PUP2YGR253C UBA1P22515 1024 aaKnown RBP7.35□□□□□ -1.23
PUP2YGR253C DCC1P25559 380 aa7.35□□□□□ -1.23
PUP2YGR253C MSP1P28737 362 aa7.35□□□□□ -1.23
PUP2YGR253C SPR1P32603 445 aa7.35□□□□□ -1.23
PUP2YGR253C MKT1P40850 830 aaKnown RBP7.35□□□□□ -1.23
PUP2YGR253C STR3P53101 465 aaKnown RBP7.35□□□□□ -1.23
PUP2YGR253C PCL10P53124 433 aa7.35□□□□□ -1.23
PUP2YGR253C THI7Q05998 598 aa7.35□□□□□ -1.23
PUP2YGR253C AAD15Q08361 143 aa7.35□□□□□ -1.23
PUP2YGR253C YOR389WQ08912 624 aa7.35□□□□□ -1.23
PUP2YGR253C YPL278CQ08990 100 aa7.35□□□□□ -1.23
PUP2YGR253C TRM8Q12009 286 aa7.35□□□□□ -1.23
PUP2YGR253C VPS68Q12016 184 aa7.35□□□□□ -1.23
PUP2YGR253C YPR089WO13585 888 aa7.34□□□□□ -1.23
PUP2YGR253C GLN4P13188 809 aaKnown RBP7.34□□□□□ -1.23
PUP2YGR253C BLI1P35727 113 aa7.34□□□□□ -1.23
PUP2YGR253C UBS1P38290 277 aa7.34□□□□□ -1.23
PUP2YGR253C YBR259WP38338 688 aa7.34□□□□□ -1.23
PUP2YGR253C HIS2P38635 335 aa7.34□□□□□ -1.23
PUP2YGR253C FLC2P39719 783 aa7.34□□□□□ -1.23
PUP2YGR253C BUD13P46947 266 aaPredicted RBP7.34□□□□□ -1.23
PUP2YGR253C VPS75P53853 264 aa7.34□□□□□ -1.23
PUP2YGR253C TGL2P54857 326 aa7.34□□□□□ -1.23
PUP2YGR253C CDC14Q00684 551 aa7.34□□□□□ -1.23
PUP2YGR253C NGL3Q03210 505 aa7.34□□□□□ -1.23
PUP2YGR253C EMI1Q04406 187 aa7.34□□□□□ -1.23
PUP2YGR253C ERF2Q06551 359 aa7.34□□□□□ -1.23
PUP2YGR253C PUF3Q07807 879 aaKnown RBP RIP-Chip data7.34□□□□□ -1.23not detected
PUP2YGR253C SLY1P22213 666 aa7.33□□□□□ -1.24
PUP2YGR253C TFC3P34111 1160 aa7.33□□□□□ -1.24
PUP2YGR253C RRT2P38332 387 aa7.33□□□□□ -1.24
PUP2YGR253C SET5P38890 526 aaKnown RBP7.33□□□□□ -1.24
PUP2YGR253C STN1P38960 494 aa7.33□□□□□ -1.24
PUP2YGR253C CCT6P39079 546 aa7.33□□□□□ -1.24
PUP2YGR253C SPC72P39723 622 aa7.33□□□□□ -1.24
PUP2YGR253C RPH1P39956 796 aa7.33□□□□□ -1.24
PUP2YGR253C ATG3P40344 310 aa7.33□□□□□ -1.24
PUP2YGR253C RGD2P43556 714 aa7.33□□□□□ -1.24
PUP2YGR253C YGL108CP53139 140 aa7.33□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 46.7 ms